Duncan M J MJ - OmicsDI

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Unknown (435)
Metabolomics (12)
Proteomics (4)
Transcriptomics (1)

Organisms

Bombus terrestris (2)
Homo sapiens (2)
mouse gut metagenome (1)

Repository

MetaboLights (11)
pride (4)
biostudies-arrayexpress (1)
GNPS (1)

Tissue

Breast cancer cell (1)
Epithelial cell (1)
Venom (1)

Disease

Breast cancer (1)

Technology Type

Mass spectrometry (9)
Mass Spectrometry (4)
Mass spectrometry assay (2)
NMR spectroscopy (2)
Bottom-up proteomics (2)
Shotgun proteomics (2)
Affinity purification coupled with mass spectrometry proteomics (1)
Data-dependent acquisition (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (7)
LTQ FT (1)
MaXis (1)
Bruker (1)
Flow injection analysis MS – POS (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS – NEG (1)
Liquid Chromatography MS – POS (1)
Nuclear Magnetic Resonance (NMR) - (1)

Publication Date

2023 (7)
2015 (3)
2024 (2)
2013 (1)
2022 (1)
2018 (1)
2026 (1)
2025 (1)

CHEBI ID

CHEBI:30769 (4)
CHEBI:15603 (3)
CHEBI:16359 (3)
CHEBI:17191 (3)
CHEBI:17895 (3)
CHEBI:28865 (3)
CHEBI:32816 (3)
CHEBI:35038 (3)
CHEBI:4167 (3)
CHEBI:139138 (2)
CHEBI:143745 (2)
CHEBI:143757 (2)
CHEBI:15354 (2)
CHEBI:15366 (2)
CHEBI:15428 (2)
CHEBI:15611 (2)
CHEBI:15741 (2)
CHEBI:15891 (2)
CHEBI:15971 (2)
CHEBI:16196 (2)
CHEBI:16236 (2)
CHEBI:16344 (2)
CHEBI:16414 (2)
CHEBI:16610 (2)
CHEBI:16643 (2)
CHEBI:16737 (2)
CHEBI:16857 (2)
CHEBI:16870 (2)
CHEBI:16919 (2)
CHEBI:16977 (2)

Metabolite Name

Cholic acid (3)
Citric acid (3)
Tris(2-butoxyethyl) phosphate (3)
(2S,3S,4S,5R,6R)-6-[[(3S,4S,6aR,6bS,8aR,9R,12aS,14bR)-9-hydroxy-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-5-[(2S,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxyoxane-2-carboxylic acid (2)
1-({[2-(2-furylmethyl)-5-methylpyrrolidinyl]amino}methylene)-7-[8-({[2-(2-fury lmethyl)pyrrolidinyl]amino}methylene)-1,6-dihydroxy-3-methyl-5-(methylethyl)-7 -oxo(2-naphthyl)]-3,8-dihydroxy-6-methyl-4-(methylethyl)naphthalen-2-one (2)
1-Stearoyl-2-hydroxy-sn-glycero-3-phosphocholine (2)
2,6-Di-tert-butyl-4-hydroxymethylphenol (2)
3-Hydroxybutyric acid (2)
3-Hydroxyisovaleric acid (2)
9(10)-EpOME (2)
Alpha-linolenic acid|linolenic acid|(9Z,12Z,15Z)-octadeca-9,12,15-trienoic acid (2)
D-Glucose (2)
Dibutyl phthalate (DBP) (2)
Elaidic acid (2)
Guanidoacetic acid (2)
L-Lactic acid (2)
Lyso-PC(16:0) (2)
Malonic acid (2)
Monoolein (2)
NCGC00385123-01_C22H30O6_7b,9-Dihydroxy-3-(hydroxymethyl)-1,1,6,8-tetramethyl-5-oxo-1,1a,1b,4,4a,5,7a,7b,8,9-decahydro-9aH-cyclopropa[3,4]benzo[1,2-e]azulen-9a-yl acetate (2)
Pyruvic acid (2)
Succinate (2)
Taurocholic acid (2)
Xanthine (2)
(N6+N1)-Acetyl-Lys (1)
(R)-4-((3R,4R,5S,8S,9S,10R,13R,14S,17R)-3,4-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)
(R)-4-((3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-3,7,12-trihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)
1,3,5-triprop-2-enyl-1,3,5-triazaperhydroine-2,4,6-trione (1)
1,4a-dimethyl-9-oxo-7-propan-2-yl-3,4,10,10a-tetrahydro-2H-phenanthrene-1-carboxylic acid (1)
1-(9Z-Octadecenoyl)-sn-glycero-3-phosphocholine (1)

Study type

RNA-seq of coding RNA (1)

Release Date

2021 (48)
2023 (41)
2025 (39)
2022 (39)
2024 (38)
2020 (33)
2019 (32)
2018 (32)
2014 (24)
2015 (23)
2017 (18)
2016 (16)
2013 (14)
2012 (14)
2011 (11)
2026 (5)
2010 (2)
2009 (2)
2008 (2)
2007 (1)
2005 (1)
2003 (1)

Lab affiliation

1Lester and Sue Smith Breast Center and Dan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine, Houston, TX 77030, USA (1)
Department of Biochemistry and Microbiology, L-Probe Lab Ghent University (1)
Maynooth University Department of Biology Maynooth University, Maynooth, Co. Kildare, Ireland. (1)
UCSF (1)

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NCOA1 Directly Targets M-CSF1 Expression to Promote Breast Cancer Metastasis.

Not available

S-EPMC4083628 | biostudies-literature

Regulatory T cells promote endurance exercise adaptation by shielding muscle mitochondria from damage

Exercise enhances physical performance and reduces the risk of many disorders such as cardiovascular disease, type 2 diabetes, dementia and cancer. Exercise characteristically incites an inflammatory response, notably in skeletal muscles. While some effector mechanisms have been identified, regul...

2023-10-10 | MTBLS8391 | MetaboLights

Kinase inhibitor pulldown assay (KiP) for clinical proteomics.

Not available

S-EPMC10790396 | biostudies-literature

Molecular logic for cellular specializations that initiate the auditory parallel processing pathways.

Not available

S-EPMC11717940 | biostudies-literature

Microbial liberation of N-methylserotonin from orange fiber in gnotobiotic mice and humans

Plant fibers in byproduct streams produced by non-harsh food processing methods represent biorepositories of diverse, naturally occurring, and physiologically active biomolecules. To demonstrate one approach for their characterization, mass spectrometry of intestinal contents from gnotobiotic mice, ...

2022-07-28 | MTBLS2331 | MetaboLights

Large Hyperpolarizabilities at Telecommunication-Relevant Wavelengths in Donor-Acceptor-Donor Nonlinear Optical Chromophores.

Not available

S-EPMC5200929 | biostudies-literature

Host-gut microbiota interactions shape parasite infections in farmed Atlantic salmon

Animals and their associated microbiota share long evolutionary histories. However, it is not always clear how host genotype and microbiota interact to affect phenotype. We applied a hologenomic approach to explore how host-microbiota interactions shape lifetime growth and parasite infection in f...

2024-01-24 | MTBLS8575 | MetaboLights

Cycles of goal silencing and reactivation underlie complex problem-solving in primate frontal and parietal cortex.

Not available

S-EPMC10439911 | biostudies-literature

Focused Representation of Successive Task Episodes in Frontal and Parietal Cortex.

Not available

S-EPMC7132923 | biostudies-literature

LC-MS/MS-Based Serum Protein Profiling for Identification of Candidate Biomarkers in Pakistani Rheumatoid Arthritis Patients.

Not available

S-EPMC8955720 | biostudies-literature