Duncan Will W - OmicsDI

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Unknown (61)
Transcriptomics (17)
Metabolomics (6)
Genomics (4)

Organisms

Mus musculus (8)
Homo sapiens (7)
Salmonella enterica (1)
Schizosaccharomyces pombe (1)
Mycobacterium tuberculosis (1)
Saccharomyces cerevisiae (1)

Organisms

Mus musculus (1)

Repository

biostudies-arrayexpress (16)
MetaboLights (5)
EGA (3)
geo (1)
GNPS (1)
ENA (1)

Technology Type

Mass spectrometry (4)
NextSeq 500, Illumina HiSeq 4000, ILLUMINA (1)
Mass spectrometry assay (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (4)
Illumina HiSeq 2500 (2)
Illumina NovaSeq 6000 (1)
Illumina HiSeq 4000 (1)
NextSeq 500 (1)
LTQ FT (1)
MaXis (1)
Liquid Chromatography MS - positive (1)

Publication Date

2023 (6)
2011 (4)
2015 (3)
2017 (2)
2016 (2)
2021 (1)
2014 (1)
2012 (1)
2010 (1)
2009 (1)
2008 (1)

CHEBI ID

CHEBI:16359 (3)
CHEBI:28865 (3)
CHEBI:35038 (3)
CHEBI:139138 (2)
CHEBI:143745 (2)
CHEBI:143757 (2)
CHEBI:173703 (2)
CHEBI:182784 (2)
CHEBI:195271 (2)
CHEBI:27432 (2)
CHEBI:27997 (2)
CHEBI:34494 (2)
CHEBI:34687 (2)
CHEBI:64563 (2)
CHEBI:73858 (2)
CHEBI:75342 (2)
CHEBI:80774 (2)
CHEBI:10136 (1)
CHEBI:116314 (1)
CHEBI:131342 (1)
CHEBI:145227 (1)
CHEBI:16113 (1)
CHEBI:16196 (1)
CHEBI:16235 (1)
CHEBI:16312 (1)
CHEBI:165384 (1)
CHEBI:16551 (1)
CHEBI:16610 (1)
CHEBI:166468 (1)
CHEBI:166710 (1)

Metabolite Name

Cholic acid (3)
Tris(2-butoxyethyl) phosphate (3)
(2S,3S,4S,5R,6R)-6-[[(3S,4S,6aR,6bS,8aR,9R,12aS,14bR)-9-hydroxy-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-5-[(2S,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxyoxane-2-carboxylic acid (2)
1-({[2-(2-furylmethyl)-5-methylpyrrolidinyl]amino}methylene)-7-[8-({[2-(2-fury lmethyl)pyrrolidinyl]amino}methylene)-1,6-dihydroxy-3-methyl-5-(methylethyl)-7 -oxo(2-naphthyl)]-3,8-dihydroxy-6-methyl-4-(methylethyl)naphthalen-2-one (2)
1-Stearoyl-2-hydroxy-sn-glycero-3-phosphocholine (2)
2,6-Di-tert-butyl-4-hydroxymethylphenol (2)
9(10)-EpOME (2)
Alpha-linolenic acid|linolenic acid|(9Z,12Z,15Z)-octadeca-9,12,15-trienoic acid (2)
Dibutyl phthalate (DBP) (2)
Elaidic acid (2)
Lyso-PC(16:0) (2)
Monoolein (2)
NCGC00385123-01_C22H30O6_7b,9-Dihydroxy-3-(hydroxymethyl)-1,1,6,8-tetramethyl-5-oxo-1,1a,1b,4,4a,5,7a,7b,8,9-decahydro-9aH-cyclopropa[3,4]benzo[1,2-e]azulen-9a-yl acetate (2)
Taurocholic acid (2)
(R)-4-((3R,4R,5S,8S,9S,10R,13R,14S,17R)-3,4-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)
(R)-4-((3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-3,7,12-trihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)
1,3,5-triprop-2-enyl-1,3,5-triazaperhydroine-2,4,6-trione (1)
1,4a-dimethyl-9-oxo-7-propan-2-yl-3,4,10,10a-tetrahydro-2H-phenanthrene-1-carboxylic acid (1)
1-(9Z-Octadecenoyl)-sn-glycero-3-phosphocholine (1)
1-Heptadecanoyl-sn-glycero-3-phosphocholine (1)
1-Hexadecanoyl-sn-glycerol (1)
1-Hexadecyl-sn-glycero-3-phosphocholine (1)
1-Myristoyl-2-stearoyl-sn-glycero-3-phosphocholine (1)
1-Myristoyl-sn-glycero-3-phosphocholine (1)
1-Palmitoyl-2-myristoyl-sn-glycero-3-phosphocholine (1)
13(S)-HODE methyl ester (1)
13-Keto-9Z,11E-octadecadienoic acid (1)
16-Hydroxyhexadecanoic acid (1)
17(18)-EpETE (1)
2-((4R)-4-((3R,5R,6S,9S,10R,13R,14S,17R)-3,6-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanamido)ethane-1-sulfonic acid (1)

First Public Date

2017 (1)

Study type

Transcription profiling by array (8)
RNA-seq of coding RNA (3)
RNA-seq of coding RNA from single cells (2)
Differential (1)
ChIP-chip by array (1)
Other (1)

Release Date

2024 (9)
2022 (8)
2020 (8)
2021 (7)
2016 (7)
2023 (5)
2015 (5)
2019 (5)
2011 (4)
2014 (3)
2010 (3)
2025 (3)
2017 (2)
2012 (2)
2009 (1)
2008 (1)
2026 (1)
2018 (1)
2013 (1)
2006 (1)

Tags

xref:PubMed:28763805 (1)

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"What will we do if we get infected?": An interview-based study of the COVID-19 pandemic and its effects on the health and safety of sex workers in the United States.

Not available

S-EPMC8653407 | biostudies-literature

Next generation sequencing based analysis of the embryonic (E15.5) transcriptome of wild type and β1-integrin-cKO lenses

β1-integrin is the major β-integrin subunit expressed in both lens epithelial and fiber cells. Our previous research indicated that β1-integrin is essential for the maintenance of lens epithelial integrity and survival in late embryonic lens development (Simirskii et al, 2009). Lack of β1-integrin i...

ORGANISM(S): Mus musculus

2017-08-31 | GSE77188 | GEO

Transcription profiling of human embryonic stem cell line containining HSR H14, and parent H14 l

Homogenous staining regions (hsr) are cytogenetic representations of a gene amplification. They are found exclusively in tumour cells. We found a hsr in the human embryonic stem cell (hESC) line H14, this is the first report of a hsr in hESCs. FISH and CGH studies showed that the hsr was derived fro...

ORGANISM(S): Homo sapiens

2008-06-14 | E-GEOD-6561 | biostudies-arrayexpress

Culturally tailored interventions in adults with obesity: a protocol for a systematic review with meta-analysis and qualitative evidence synthesis.

Not available

S-EPMC12658497 | biostudies-literature

Polycyclic Aromatic Hydrocarbon-induced Pulmonary Carcinogenesis in Cytochrome P450 (CYP)1A1- and 1A2-Null Mice: Roles of CYP1A1 and CYP1A2.

Not available

S-EPMC7818899 | biostudies-literature

Pediatric cancer epigenome and the influence of folate.

Not available

S-EPMC4636966 | biostudies-literature

Perceptions and practices of mosquito-borne diseases in Alabama - is concern where it should be?

Not available

S-EPMC6652104 | biostudies-literature

A genomic approach towards an understanding of clonal evolution and disease progression in multiple myeloma

Multiple Myeloma (MM) is a largely incurable haematological malignancy defined by the clonal proliferation of malignant plasma cells within the bone marrow. Clonal heterogeneity has recently been established as a feature in MM, however, the subclonal evolution associated with disease progression has...

EGAS00001002850 | EGA

Myeloma Research Laboratory, University of Adelaide and South Australian Health and Medical Research Institute

Data Access Committee EGAC00001000849

EGAC00001000849 | EGA

ena-DATASET-UQDI-06-07-2018-03:19:47:723-1903 - samples

This dataset contains raw sequencing reads for matched MGUS/SMM to MM patient samples, including normal germline controls. FASTQ files were generated on Illumina NextSeq 500 and HiSeq 4000 machines following exome capture using the Agilent Clinical Research Exome kit. DNA was extracted from CD138+CD...

EGAD00001004190 | EGA

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88 Results

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