239776 Results

Show all   Save search   Copy query
Sort   by:  
 Page size 
TranscriptomicsExpression data from primary bovine mammary epithelial cells (pbMEC) challenged with heat inactivated E. coli and S. aureus particles
Infections of the udder by Escherichia coli very often elicit acute inflammation, while Staphylococcus aureus infections tend to cause mild, subclinical inflammation and persistent infections. The molecular causes undercovering the different disease patterns are poorly understood. We therefore profi...
ORGANISM(S): Bos taurus 
2012-09-07 | E-GEOD-25413 | biostudies-arrayexpress
ProteomicsMonitoring Fe-S cluster occupancy across the E. coli proteome using chemoproteomics
Iron-sulfur (Fe-S) clusters are ubiquitous metallocofactors involved in redox chemistry, radical generation, and gene regulation. Common methods to monitor Fe-S clusters include spectroscopic analysis of purified proteins, and auto-radiographic visualization of radiolabeled iron distribution in prot...
ORGANISM(S): Escherichia coli 
2024-05-22 | PXD026488 | Pride
Redime Iron-sulfur clusters Isotop-abpp E. coli 
TranscriptomicsGenome wide transcriptomic analysis of sarcomatoid (E/S), rhabdoid (E/R) and non-sarcomatoid (E*) clear cell renal cell carcinoma
An analysis of the biphasic epithelioid (E-) and sarcomatoid(S-) components of sarcomatoid RCC and advanced stage non-sarcomatoid RCC (E*) showed that: the E- and S- components shared a similar transcriptomic signature, despite morphologic differences; and that the transcriptome of sarcomatoid RCC w...
ORGANISM(S): Homo sapiens 
2015-06-18 | GSE59264 | GEO
TranscriptomicsRNA-seq transcriptomic analysis of sarcomatoid (E/S), rhabdoid (E/R) and non-sarcomatoid (E*) clear cell renal cell carcinoma
The biphasic epithelioid (E-) and sarcomatoid(S-) components of sarcomatoid RCC and epithelioid (E-) and rhabdoid (R-) components of rhabdoid RCC shared a similar transcriptomic signature, despite morphologic differences; by contrast, the transcriptome of sarcomatoid and rhabdoid RCC was sharply dis...
ORGANISM(S): Homo sapiens 
2015-05-20 | GSE59066 | GEO
TranscriptomicsTranscriptome of Sinorhizobium meliloti RNase mutants
The ribonucleases (RNases) E and J are essential in Escherichia coli and Bacillus subtilis, respectively. Sinorhizobium meliloti contains both, the rne gene encoding RNase E and the rnj gene encoding RNase J. The transcriptomes of the S. meliloti Rm2011 wild type, and rne and rnj mutants were compar...
ORGANISM(S): Sinorhizobium meliloti 
2017-01-21 | E-MTAB-5435 | biostudies-arrayexpress
TranscriptomicsRNA-sequencing of neonatal monocyte responses to E. coli and S. epidermidis
Newborns, particularly those born prematurely, are extremely vulnerable to sepsis and this has been attributed to ‘immature’ innate monocyte defences. Predominant pathogens include Escherichia. coli and Staphylococcus. epidermidis but no studies have assessed global transcriptional responses of neon...
ORGANISM(S): Homo sapiens 
2018-03-16 | GSE101880 | GEO
TranscriptomicsTranscriptome and marker frequency analysis of E. coli (control vs. Trimethoprim) and S. pneumoniae (control vs. HPUra/Kanamycin)
We show that treatment with HPUra (for S. pneumoniae) and trimethoprim (for E. coli) leads to a skewed gene dosage profile (increase around the origin of replication), which is also propagated to the transcriptome level. Kanamycin, however, does not have this effect. In case of S. pneumoniae this sh...
ORGANISM(S): Streptococcus pneumoniae 
2014-04-10 | E-GEOD-54199 | biostudies-arrayexpress
TranscriptomicsIdentification of promoter sequence elements involved in specific recognition by the ?S subunit of bacterial RNA polymerase.
Promoter recognition by bacterial RNA polymerase is mediated by ? subunits, which assemble transiently to RNA polymerase core enzyme (E) during transcription initiation. ? subunits drive transcription of specific sets of genes by allowing RNA polymerase to interact with different promoter sequences....
ORGANISM(S): Escherichia coli str. K-12 substr. MG1655 
2011-05-31 | E-GEOD-22207 | biostudies-arrayexpress
ProteomicsHuman LC-MS (Ubiquitin Ligase ITCH Controls SARS-CoV-2 Virion Assembly and Egress)
To identify host proteins that interact with SARS-CoV2 VLP components, we performed proteomic analysis of the co-immunoprecipitates pulled down by the structural proteins co-expressed in HEK293 cells (S/E/M, E or M).
ORGANISM(S): Homo sapiens (Human) 
2026-02-23 | PXD049221 | Pride
Sars-cov-2 s/e/m 
TranscriptomicsGenome wide transcriptomic analysis of sarcomatoid (E/S), rhabdoid (E/R) and non-sarcomatoid (E*) clear cell renal cell carcinoma
An analysis of the biphasic epithelioid (E-) and sarcomatoid(S-) components of sarcomatoid RCC and advanced stage non-sarcomatoid RCC (E*) showed that: the E- and S- components shared a similar transcriptomic signature, despite morphologic differences; and that the transcriptome of sarcomatoid RCC w...
ORGANISM(S): Homo sapiens 
2015-06-18 | E-GEOD-59264 | biostudies-arrayexpress
Sort   by:  
 Page size