Sort   by:  
 Page size 
MetabolomicsContribution of fungal microbiome to intestinal physiology, early-life immune development and mucosal inflammation in mice
The gut microbiome consists of a multi-kingdom microbial community. Whilst the role of bacteria as causal contributors governing host physiological development is well established, the role of fungi remains to be determined. Here, we use germ-free mice colonized with defined species of bacteria, fun...
2022-01-14 | MTBLS1679 | MetaboLights
MetabolomicsSynergistic metabolism of salivary MUC5B in oral commensal bacteria during early biofilm formation

Bacterial metabolism in oral biofilms is comprised of complex networks of nutritional chains and biochemical regulations. These processes involve both intraspecies and interspecies networks as well as interactions with components from host saliva, gingival crevicular fluid, and dietary intake. In...

2023-10-30 | MTBLS8370 | MetaboLights
MetabolomicsAnalysis of Growth Phases of Enterotoxigenic Escherichia coli Reveals a Distinct Transition Phase before Entry into Early Stationary Phase with Shifts in Tryptophan, Fucose, and Putrescine Metabolism and Degradation of Neurotransmitter Precursors

Enterotoxigenic Escherichia coli (ETEC) is a major cause of diarrhea in children and adults in endemic areas. Gene regulation of ETEC during growth in vitro and in vivo needs to be further evaluated, and here we describe the full transcriptome and metabolome of ETEC dur...

2022-07-15 | MTBLS3540 | MetaboLights
ProteomicsMetaproteomics of Premature Infant Gut Colonization
Microbial colonization of the human gastrointestinal tract plays an important role in establishing health and homeostasis. However, the time-dependent and related functional signatures of microbial and human proteins during early colonization of the gut have yet to be determined. Thus, we employed s...
ORGANISM(S): Homo sapiens (Human) 
2014-12-16 | PXD000114 | Pride
Colonization/ infant gut/ microbiome/ metaproteomics 
TranscriptomicsCodY of Streptococcus pneumoniae: link between nutritional gene regulation and virulence
CodY is a nutritional regulator mainly involved in amino acid metabolism. It has been extensively studied in Bacillis subtilis and Lactococcus lactis. We investigated the role of CodY in gene regulation and virulence of the human pathogen Streptococcus pneumoniae. We constructed a codY-mutant and ex...
ORGANISM(S): Streptococcus pneumoniae TIGR4 
2010-05-25 | E-GEOD-7350 | biostudies-arrayexpress
GenomicsCutaneous T effector transcriptomic responses triggered by early colonization of Staphylococcus species in new-born mice
Cutaneous T effector transcriptomic responses triggered by early colonization of Staphylococcus species in new-born mice
PRJNA471292 | ENA
GenomicsEarly transcriptome response of Trichoderma virens to colonization of maize roots
Early transcriptome response of Trichoderma virens to colonization of maize roots
PRJNA751374 | ENA
TranscriptomicsIntestinal development in two divergent chicken lines (X and Y)
The objective of this study was to investigate the impact of genotypic variation on both early microbial colonization of the gut and functional development of intestinal tissue. From two genetically diverse chicken lines intestinal content samples were taken for microbiota analyzes and intestinal ti...
ORGANISM(S): Gallus gallus 
2016-01-14 | E-GEOD-65042 | biostudies-arrayexpress
ProteomicsMetaproteomic Profiling of Functional Changes Driven by Gut Fungal Colonization
Gut microbiome modulates the host immune development, yet the functional contribution of gut fungi remains elusive. We previously showed that mice colonized only with fungi displayed allergic features and fecal metabolite profiles similar to germ-free mice. To gain insights into the functional chang...
ORGANISM(S): Mus musculus (Mouse) 
2022-02-28 | PXD019355 | Pride
Gut fungi Early-life gut microbiome Lfq and tmt proteomics Gnotobiotic mice 
Genomicssheep gut metagenome
gut microbiota colonization in early life
PRJNA1057063 | ENA
Sort   by:  
 Page size