Easton A A - OmicsDI

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Unknown (1428)
Genomics (76)
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Organisms

Homo sapiens (103)
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Streptococcus pneumoniae D39 (3)
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Ictidomys tridecemlineatus (2)
Lactobacillus acidophilus NCFM (2)
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219334 (1)
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Bacteria (1)
Bemisia sp. Unknown_Th_13_12_S.lycopersicum (1)
Candidatus Pelagibacter communis (1)
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Equus caballus (1)
Limosilactobacillus reuteri subsp. reuteri (1)
Oncorhynchus mykiss (1)
Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 (1)

Repository

EGA (72)
pride (48)
biostudies-arrayexpress (23)
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Metabolic dysfunction-associated steatotic liver disease (3)
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Technology Type

Mass Spectrometry (48)
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Instrument Platform

Illumina HiSeq 2000 (4)
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Publication Date

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2014 (9)
2018 (8)
2019 (8)
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2017 (3)
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2013 (2)
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2015 (1)

CHEBI ID

CHEBI:25017 (3)
CHEBI:16449 (2)
CHEBI:16797 (2)
CHEBI:18123 (2)
CHEBI:24898 (2)
CHEBI:27266 (2)
CHEBI:27480 (2)
CHEBI:78320 (2)
CHEBI:132327 (1)
CHEBI:132806 (1)
CHEBI:134461 (1)
CHEBI:134592 (1)
CHEBI:134594 (1)
CHEBI:134596 (1)
CHEBI:134597 (1)
CHEBI:134598 (1)
CHEBI:134646 (1)
CHEBI:136066 (1)
CHEBI:136070 (1)
CHEBI:136071 (1)
CHEBI:136147 (1)
CHEBI:136148 (1)
CHEBI:136150 (1)
CHEBI:136170 (1)
CHEBI:136224 (1)
CHEBI:136226 (1)
CHEBI:136230 (1)
CHEBI:136235 (1)
CHEBI:136236 (1)
CHEBI:136240 (1)

Metabolite Name

Leucine (2)
1-Methylnicotinamide (1)
1-Methyluric acid (1)
2-oxoglutaric acid (1)
3-hydroxybutyric acid (1)
3-hydroxyisobutyric acid (1)
4-Aminobutanoate (1)
5-Hydroxytryptophan isomer (1)
Arabinonate (1)
Asparagine (1)
Betaine (1)
Carboxyethylarginine (1)
Carboxyethyllysine (1)
Carnitine (1)
Cer(d18:0/16:0) (1)
Cer(d18:0/18:0) (1)
Cer(d18:0/22:0) (1)
Cer(d18:0/22:1) (1)
Cer(d18:0/24:0) (1)
Cer(d18:0/24:1) (1)
Cer(d18:1/16:0) (1)
Cer(d18:1/17:0) (1)
Cer(d18:1/18:0) (1)
Cer(d18:1/22:0) (1)
Cer(d18:1/22:1) (1)
Cer(d18:1/24:0(OH)) (1)
Cer(d18:1/24:0) (1)
Cer(d18:1/24:1) (1)
Cer(d18:2/18:0) (1)
Chlorotyrosine (1)

First Public Date

2016 (3)

Modification

Not available (1)

Study type

Transcription profiling by array (16)
CLIP-seq (4)
Other (1)
ChIP-seq (1)
RNA-seq of coding RNA (1)

Release Date

2020 (124)
2015 (110)
2021 (108)
2023 (104)
2022 (103)
2019 (100)
2016 (96)
2018 (92)
2025 (81)
2017 (79)
2014 (76)
2012 (67)
2024 (66)
2013 (47)
2011 (45)
2010 (35)
2008 (29)
2009 (28)
2007 (21)
2026 (11)
2005 (7)
2006 (6)
2003 (4)
2004 (3)
2001 (3)
2000 (3)
2002 (1)
1999 (1)
1998 (1)

Lab affiliation

USDA-ARS (4)
Cedars-Sinai Medical Center (3)
The Drug Discovery Lab, Mary S. Easton Center for Alzheimer’s Disease Research, Department of Neurology, David Geffen School of Medicine, 710 Westwood Plaza, University of California Los Angeles, Los Angeles, CA 90095, USA (3)
University of Oxford (3)
Department of Biology, Institute of Molecular Systems Biology, ETH, Zurich, Switzerland (2)
Div. Clinical Protein Science & Imaging, Dept. of Clinical Sciences (Lund) and Dept. of Biomedical Engineering, Lund University, Lund, Sweden (2)
Naval Research Laboratory (2)
Agricultural Center Baden-Württemberg, Fisheries Research Station, Germany (1)
Biology University of Minnesota Duluth (1)
Biomedical and Pharmaceutical Sciences, University of Rhode Island, Kingston, RI, 02881, USA (1)
CBMSE (1)
Center for Bio/Molecular Science & Engineering (Code 6900), US Naval Research Laboratory, Washington DC, USA (1)
Center for Bio/Molecular Science & Engineering, NRL-DC (1)
Core Facility Proteomics, Department of Clinical Chemistry, Universitry Medical Center Göttingen, Germany (1)
Department of Biochemistry, Molecular Biology and Biophysics, University of Minnesota, Minneapolis, MN, USA (1)
Department of Biomedical and Pharmaceutical Sciences, College of Pharmacy,University of Rhode Island, Kingston, RI, 02881, (1)
Department of Biomedical and Pharmaceutical Sciences, University of Rhode Island, Kingston, RI USA (1)
Department of Laboratory Medicine and Pathology, Mayo Clinic, 200 First ST SW, Rochester, MN 55905, USA (1)
Department of Microbiology, Oregon State University, Corvallis, Oregon 97331 (1)
Director, Advanced Clinical Biosystems Research Institute (1)
Finley and Gygi lab Cell Biology Department Harvard Medical School US (1)
King's College London Centre for Inflammation Biology & Cancer Immunology School of Immunology & Microbial Sciences 1st Floor New Hunt's House, Guy's Campus London, UK SE1 1UL (1)
Laboratory of Mass Spectrometry, Core Facility Laboratories, Intercollegiate Faculty of Biotechnology UG-MUG, University of Gdansk, Gdansk, Poland (1)
McPhail Equine Performance Center, Department of Large Animal Clinical Sciences, Michigan State University (1)
Neuroimmunology and MS Research University Hospital Zurich Frauenklinikstrasse 26 8091 Zurich Switzerland (1)
Pratik Jagtap, Managing Director, Center for Mass Spectrometry and Proteomics, 43 Gortner Laboratory, 1479 Gortner Avenue, St. Paul, MN 55108 Phone: 612-624-9275 (1)
ProCan®, Children’s Medical Research Institute, Faculty of Medicine and Health, The University of Sydney, Westmead, NSW, Australia. (1)
Pulmonary, Allergy, Critical Care, and Sleep Division Medicine Department University of Minnesota - TC Minneapolis, MN (1)
Pulmonary, Critical Care, and Sleep Medicine Veterans Affairs Medical Center, Minneapolis, MN Pulmonary, Critical Care, and Sleep Medicine University of Minnesota, Minneapolis, MN (1)
St Jude Children's Research Hospital (1)

Tags

xref:ArrayExpress:E-MTAB-5026 (1)
xref:ArrayExpress:E-MTAB-5027 (1)
xref:ArrayExpress:E-MTAB-4000 (1)

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Metabolomic Profiling of Submaximal Exercise at a Standardised Relative Intensity in Healthy Adults

Ten physically active subjects underwent two cycling exercise trials. In the first, aerobic capacity (VO2max) was determined and the second was a 45 min submaximal exercise test. Urine samples were collected separately the day before (day 1), the day of (day 2), and the day after (day 3) the submaxi...

2017-05-16 | MTBLS306 | MetaboLights

Clinical Model for Predicting Warfarin Sensitivity.

Not available

S-EPMC6731233 | biostudies-literature

Development of an in vitro diagnostic method to determine the genotypic sex of Xenopus laevis.

Not available

S-EPMC6500372 | biostudies-literature

PTBP1 - Modified iCLIP

This experiments was performed in HeLa cells according to the iCLIP protocol with the following modifications: no antiRNase was used and the concentration of RNase I was 0.5 U/ml. In iCLIP4, the dephosphorylation step was omitted from the standard protocol. The rest of the protocol was identical to...

ORGANISM(S): Homo sapiens

2016-11-24 | E-MTAB-5026 | biostudies-arrayexpress

Prion-specific Hsp40 function: The role of the auxilin homolog Swa2.

Not available

S-EPMC5480384 | biostudies-literature

LipidFrag: Improving reliability of in silico fragmentation of lipids and application to the Caenorhabditis elegans lipidome

Lipid identification is a major bottleneck in high-throughput lipidomics studies. We combined the in silico fragmentation tool MetFrag with LipidMaps lipid-class specific classifiers which calculate probabilities for lipid class assignments. The LipidFrag approach was then applied to MS/MS spectra o...

2017-03-09 | MTBLS291 | MetaboLights

Frog sign and AV nodal reentrant tachycardia: A case report.

Not available

S-EPMC8547684 | biostudies-literature

Warfarin sensitivity is associated with increased hospital mortality in critically Ill patients.

Not available

S-EPMC9070894 | biostudies-literature

RSV increases the virulence of Streptococcus pneumoniae by binding to PBP1a: a new paradigm respiratory infection

This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

ORGANISM(S): Streptococcus pneumoniae D39

2014-06-21 | E-GEOD-58427 | biostudies-arrayexpress

Practical considerations in clinical strategy to support the development of injectable drug-device combination products for biologics.