Effluent - OmicsDI

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Unknown (1959)
Genomics (1313)
Proteomics (193)
Transcriptomics (128)
Metabolomics (70)
Other (4)
Clinical (1)
Methylation profiling (1)

Organisms

Homo sapiens (26)
Pimephales promelas (24)
Saccharomyces cerevisiae (13)
Oncorhynchus mykiss (8)
Danio rerio (6)
Mus musculus (5)
Sparus aurata (5)
Etheostoma caeruleum (4)
Pseudomonas aeruginosa (3)
Actinobacillus pleuropneumoniae (3)
Rattus norvegicus (3)
riverine metagenome (2)
Menidia beryllina (2)
Gambusia holbrooki (2)
Bordetella sp. IITR-02 (2)
Enteromyxum leei (2)
Anguilla anguilla (2)
soil metagenome (2)
Klebsiella pneumoniae (2)
Carassius auratus (1)
Salmonella enterica (1)
Bacillus subtilis subsp. subtilis str. 168 (1)
Daphnia magna (1)
Oryza sativa Indica Group (1)
Neisseria meningitidis (1)
Pleuronichthys verticalis (1)
mixed sample (1)
Salmo salar (1)
Caenorhabditis elegans (1)
Rhinichthys cataractae (1)

Organisms

hot springs metagenome (368)
wastewater metagenome (80)
Pimephales promelas (18)
Homo sapiens (18)
activated sludge metagenome (15)
sludge metagenome (11)
soil metagenome (11)
Escherichia coli (10)
bioreactor metagenome (9)
synthetic metagenome (8)
anaerobic digester metagenome (8)
aquatic metagenome (8)
biofilm metagenome (7)
Danio rerio (6)
riverine metagenome (6)
Klebsiella pneumoniae (5)
Oncorhynchus mykiss (4)
freshwater metagenome (4)
Pseudomonas aeruginosa (4)
Bacteria (4)
sediment metagenome (4)
mine drainage metagenome (3)
microbial fuel cell metagenome (3)
food metagenome (3)
Acinetobacter baumannii (3)
metagenome (3)
Saccharomyces cerevisiae (3)
Pseudomonas phage J3 (2)
Etheostoma caeruleum (2)
industrial waste metagenome (2)

Repository

ENA (1312)
pride (182)
biostudies-arrayexpress (76)
MetaboLights (67)
geo (58)
MassIVE (7)
GNPS (3)
iProX (3)
NODE (1)

Tissue

Cell culture (28)
Heart (10)
Brain (7)
Permanent cell line cell (7)
Epithelial cell (7)
Midgut (6)
Fibroblast (5)
Granulosa cell (4)
Blood plasma (4)
Wound fluid (3)
Dental plaque (3)
Stem cell (3)
Peritoneal dialysis fluid (2)
Epithelial cell of lung (2)
Venom (2)
Early embryonic cell (2)
Leukocyte (2)
Feces (2)
Embryo (2)
Testis (2)
Whole body (2)
Neutrophil (2)
Blood cell (2)
Blood (2)
Peritoneal dialysis effluent-derived extracellular vesicles (1)
KGN cell (1)
Alveolar bone (1)
Obsolete tracheary element (1)
Lung adenocarcinoma cell (1)
Epithelium (1)

Disease

Disease free (4)
Cardiovascular system disease (3)
Wounds and Injuries (3)
Rhabdomyosarcoma (2)
Arrhythmogenic right ventricular cardiomyopathy (2)
Toxoplasmosis (2)
Parkinson's disease (2)
Adenomatous Polyposis Coli (1)
End stage renal disease (1)
Alveolar rhabdomyosarcoma (1)
Eosinophilic esophagitis (1)
Limb muscle (1)
Embryonal rhabdomyosarcoma (1)
Gonorrhea (1)
Connective tissue disease (1)
Congestive heart failure (1)
Severe acute respiratory syndrome coronavirus 2 (1)
Granulosa cell tumor (1)
Lewy body dementia (1)
Sleeping sickness (1)
Plasmodium falciparum malaria (1)
Lung adenocarcinoma (1)
Colitis (1)
Prostate adenocarcinoma (1)
Prostate cancer (1)
Lung cancer (1)
Inflammatory bowel disease (1)
Atherosclerosis (1)
Periodontitis (1)
Alzheimer's disease (1)

Technology Type

Mass Spectrometry (182)
Shotgun proteomics (93)
Mass spectrometry (48)
Affinity purification coupled with mass spectrometry proteomics (41)
Bottom-up proteomics (29)
Data-dependent acquisition (23)
Mass spectrometry assay (18)
Gel-based experiment (9)
SRM/MRM (7)
Top-down proteomics (5)
SWATH MS (3)
Chemical cross-linking coupled with mass spectrometry proteomics (3)
Data-independent acquisition (2)
NMR spectroscopy (1)
Mass spectrometry imaging (1)
Affinity proteomics (1)
HDMSE (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (19)
Liquid Chromatography MS - negative - reverse phase (19)
Liquid Chromatography MS - negative - reverse-phase (9)
Liquid Chromatography MS - positive - reverse-phase (8)
Gas Chromatography MS - positive (5)
Illumina NovaSeq 6000 (3)
5975C Series GC/MSD (Agilent) (3)
Liquid Chromatography MS - alternating - reverse-phase (3)
Liquid Chromatography MS - negative - hilic (3)
Liquid Chromatography MS - positive - hilic (3)
Q Exactive GC Orbitrap (2)
6530A Q-TOF LC/MS (2)
QExactive negative (Thermo Scientific) (2)
QExactive positive (Thermo Scientific) (2)
QTOF G6550A negative (Agilent) (2)
QTOF G6550A positive (Agilent) (2)
Intel Xeon E5-2660 (128G RAM) (1)
Jencons Millennium CO2 Incubator (1)
Ion Torrent Proton (1)
NextSeq 550 (1)
Illumina HiSeq 2000 (1)
Illumina HiSeq 4000 (1)
Orbitrap Exploris 240 (1)
Q Exactive Hybrid Quadrupole-Orbitrap Mass Spectrometer (1)
6546 LC Q-TOF (Agilent Model) (1)
6545 Q-TOF LC/MS (1)
TimsTOF fleX (1)
MaXis (1)
6560 Q-TOF LC/MS (1)
Q Exactive Plus (1)

Publication Date

2026 (43)
2025 (40)
2023 (33)
2022 (30)
2021 (28)
2024 (26)
2020 (22)
2012 (22)
2019 (19)
2016 (16)
2014 (16)
2010 (16)
2017 (15)
2018 (14)
2015 (14)
2013 (13)
2011 (11)
2008 (7)
2009 (4)
2004 (1)
2005 (1)

CHEBI ID

CHEBI:15428 (14)
CHEBI:17992 (12)
CHEBI:15741 (12)
CHEBI:30915 (12)
CHEBI:30769 (12)
CHEBI:28842 (11)
CHEBI:17268 (11)
CHEBI:18012 (11)
CHEBI:15756 (10)
CHEBI:17754 (9)
CHEBI:28044 (9)
CHEBI:30805 (8)
CHEBI:25094 (8)
CHEBI:18186 (8)
CHEBI:28300 (8)
CHEBI:24898 (8)
CHEBI:25017 (8)
CHEBI:6650 (8)
CHEBI:16865 (8)
CHEBI:17568 (8)
CHEBI:18183 (8)
CHEBI:18050 (8)
CHEBI:16857 (8)
CHEBI:16414 (8)
CHEBI:26078 (8)
CHEBI:17351 (8)
CHEBI:17521 (7)
CHEBI:32365 (7)
CHEBI:33508 (7)
CHEBI:22660 (7)

Metabolite Name

L-Phenylalanine (8)
Glycine (7)
Succinic acid (7)
Malic acid (7)
Putrescine (7)
L-Glutamine (7)
N-(2-Hydroxy-4-methoxyphenyl)acetamide (6)
P-Coumaric acid methyl ester (6)
S-Methyl-L-cysteine (6)
Citric acid (6)
Sucrose (6)
Myo-inositol (6)
Glycocholic acid (6)
Azelaic acid (6)
Cyclo-(Gly-Phe) (5)
6-Chloropurine (5)
3,5,7,4'-Tetrahydroxy-Coumaronochromone (5)
3,4'-Dihydroxy-3',5'-dimethoxypropiophenone (5)
1-phenyl-7-(4-hydroxyphenyl)-4-ene-3-heptanone (5)
LysoPC 18:3(2n isomer) (5)
LysoPC 16:0(2n isomer) (5)
LysoPC 16:0 (5)
10-Formyltetrahydrofolic Acid (5)
Hesperetin-7-O-glucoside (5)
Ribosyladenosine (5)
Scopoletin-7-O-glucoside (Scopolin) (5)
Oleamide (9-Octadecenamide) (5)
Octadeca-11E,13E,15Z-trienoic acid (5)
Methoxyindoleacetic acid (5)
6-O-methylguanine (5)

First Public Date

2025 (434)
2026 (198)
2024 (129)
2021 (73)
2023 (72)
2019 (69)
2022 (68)
2017 (68)
2018 (52)
2014 (42)
2020 (39)
2016 (29)
2015 (21)
2013 (18)

Classification

bacteria (32)
fungi (2)
viruses (2)

Modification

N6 (2)
0.984016 (1)
15.994915 (1)
2x(15)N labeled L-lysine (1)
57.02146 (1)
15.99491 (1)
4x(15)N labeled L-arginine (1)
57.021464 (1)
Not available (1)

Study status

Terminated (1)

Study type

Transcription profiling by array (63)
RNA-seq of coding RNA (5)
Comparative genomic hybridization by array (2)
RNA-seq of coding RNA from single cells (2)
Unknown experiment type (1)
Other (1)
ScATAC-seq (1)
MicroRNA profiling by array (1)
Observational (1)

Release Date

2022 (255)
2021 (234)
2025 (225)
2023 (217)
2024 (185)
2020 (155)
2018 (139)
2019 (132)
2017 (82)
2016 (74)
2014 (57)
2015 (51)
2013 (41)
2026 (35)
2012 (34)
2011 (29)
2010 (26)
2009 (12)
2008 (11)
2006 (8)
2004 (6)
2007 (6)
2005 (6)
2003 (6)
2001 (3)
1999 (3)
1998 (2)
2000 (1)

Lab affiliation

Department of Entomology,Institute of Vegetables and Flowers,Chinese Academy of Agriculture Sciences,Beijing,100081,China (6)
Department of Molecular Biology, Biomedical Center Munich, Ludwig-Maximilians University, Großhaderner Strasse 9, 82152 Planegg-Martinsried, Germany (3)
The Drug Discovery Lab, Mary S. Easton Center for Alzheimer’s Disease Research, Department of Neurology, David Geffen School of Medicine, 710 Westwood Plaza, University of California Los Angeles, Los Angeles, CA 90095, USA (3)
Medical University of Vienna (3)
Department for Cell Biology BioMedizinisches Centrum - BMC LMU Muenchen, Med. Faculty Großhaderner Straße 9 82152 Planegg-Martinsried (2)
Burns and Trauma Research,School of Biomedical Sciences, Queensland University of Technology (2)
Biocenter, Faculty of Biology, Genetics Ludwig-Maximilians-University Munich (LMU) 82152 Martinsried, Germany (2)
Department of Biomedical Sciences, Affiliated with The Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen. (2)
Institute of Ecology and Evolution, University of Bern, Baltzerstrasse 6, CH-3012 Bern, Switzerland (2)
Department of Biomedical Sciences, Faculty of Health and Medical Sciences, University of Copenhagen, Denmark (2)
Institut für Experimentelle und Klinische Pharmakologie und Toxikologie, PZMS, Universität des Saarlandes, Geb. 46, 66421 Homburg, Germany (2)
BioArCh, University of York, UK (2)
Research Unit Molecular Epigenetics German Research Center for Environmental Health (GmbH) Helmholtz Zentrum München Marchioninistraße 25 81377 Munich Tel. +49 89 3187-1512 Fax +49 89 3187-1200 (1)
Institut für Molekularbiologie und Tumorforschung (IMT) Biomedizinisches Forschungszentrum Philipps-Universität Marburg Hans-Meerwein-Straße 2 35043 Marburg (Germany) Phone: +49-(0)6421-28-66840 (1)
Massachusetts General Hospital Harvard Medical School (1)
The First Affiliated Hospital of Guangxi Medical University (1)
Department of Biochemistry and Molecular Biology, College of Medicine, Chang Gung University, No.259, Wenhua 1st Rd., Guishan Dist., Taoyuan City 33302, Taiwan (R.O.C.) (1)
Ludwig-Maximilians-Universität, Biomedizinisches Centrum (BMC) (1)
Departments of Medicine (Division of Cardiology), Virginia Commonwealth University, Richmond, VA, 23298 (1)
Institute of Molecular Biology and Tumor Research (IMT)Philipps University of Marburg, Marburg, 35043, Germany and Department of Hematology, Oncology, and Immunology, University Hospital Giessen and Marburg, Marburg, 35043, Germany (1)
Intravacc, Antonie van Leeuwenhoeklaan 9, 3721 MA Bilthoven, The Netherlands (1)
Department for Cell Biology BioMedizinisches Centrum - BMC LMU Muenchen, Med. Faculty Großhaderner Straße 9 82152 Planegg-Martinsried (1)
BMC, Zellbiologie, Anatomie III Großhaderener Strasse 9 D-82152 Planegg Germany (1)
Department for BioMedical Research (DBMR) University of Bern Murtenstrasse 35 3008 Bern Switzerland (1)
Chang Gung Memorial Hospital (1)
Biomedical Center Munich Molecular Biology Großhaderner Strasse 9 82152 Planegg-Martinsried Phone: (089) 2180 71602 (1)
State Key Laboratory of Reproductive Medicine, Department of Histology and Embryology, Nanjing Medical University, Nanjing, Jiangsu 210029, China. (1)
RNA Biology Group, Cancer Research UK Manchester Institute, The University of Manchester, Wilmslow Road, Manchester M20 4BX, United Kingdom. (1)
Molecular Biology Department Histone Modifications Group Adolf Butenandt Institute 80336 Munich Germany (1)
Department for Neurodegenerative Science Van Andel Institute Grand Rapids, MI (1)

Location

United States (1)

Keyword

Adnab-9 (1)
Barium enema (1)
Flexible sigmoidoscopy (1)
FOBT (1)
Stool (1)
FIT (1)
Monoclonal antibody (1)
IFOBT (1)
Colonoscopy (1)

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Evaluation of the toxic effects of municipal wastewater effluent on mice using omic approaches

Municipal wastewater effluents (MWWE) contain a lot of trace organic pollutants, which will be a threat to environmental health. However, little information is available for the mixed toxicity of MWWE on mammals. In the present study, male mice were exposed to MWWE for 90 days, and then, histopathol...

2018-10-11 | MTBLS48 | MetaboLights

Short-term exposure to effluent from bulk drug industries

The Patancheru area near Hyderabad in India is recognized as a key link in the global supply chain for many bulk drugs. A central treatment plant receives wastewater from about 90 different manufacturers and the resulting complex effluent has contaminated surface, ground and drinking water in the re...

ORGANISM(S): Rattus norvegicus

2012-09-01 | E-GEOD-23983 | biostudies-arrayexpress

Linkage of behavioral and genomic impacts of a wastewater effluent on the fathead minnow

Rivers containing effluents from water treatment plants are complex soups of compounds, ranging from pharmaceuticals to natural hormones. Male fathead minnows (Pimephales promelas) were exposed for 3 weeks to effluent waters from the Metropolitan Wastewater Treatment Plant in St. Paul, MN. Fish wer...

ORGANISM(S): Pimephales promelas

2010-10-29 | E-GEOD-23490 | biostudies-arrayexpress

effluent on microalgae

Impact of dark fermentation effluent on microalgae growth in mixotrophic conditions

PRJNA1107359 | ENA

TMT-FASP-LC-MS analysis of peritoneal dialysis effluent

Peritoneal dialysis (PD) is a modality of renal replacement therapy in which the high volumes of available PD effluent (PDE) represents a rich source of biomarkers for monitoring disease and therapy. Although this information could help guiding the management of PD patients, little is known about th...

ORGANISM(S): Homo sapiens (Human)

2012-12-13 | PXD006863 | Pride

GENOMIC AND PHENOTYPIC RESPONSE OF HORNYHEAD TURBOT EXPOSED TO MUNICIPAL WASTEWATER EFFLUENTS

Laboratory tests with marine flatfish were conducted to investigate associations among gene expression, higher biological responses and wastewater effluent exposure. Previous studies showed molecular responses such as elevated concentrations of plasma estradiol and vitellogenin in wild male hornyhe...

ORGANISM(S): Pleuronichthys verticalis

2013-12-10 | E-MEXP-3851 | biostudies-arrayexpress

UV influent and effluent

UV influent and effluent Raw sequence reads

PRJNA890043 | ENA

Metagenomic analysis in hydroponic effluent

PRJEB82461 | ENA

Chicago River and effluent

Chicago River and effluent disinfection experiment

PRJNA476598 | ENA

Wastewater treatment plant effluent

Wastewater treatment plant effluent Raw sequence reads