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TranscriptomicsIdentification of the core gene-regulatory network that governs the dynamic adaptation of intestinal homeostasis during conventionalization in mice
Molecular adaptation of the intestinal mucosa occurs during microbial conventionalization to maintain a balanced immune response. However, the genetic regulation of such adaptation is obscure. Here, combined analysis of germ free and conventionalized mice revealed that the major molecular adaptation...
ORGANISM(S): Mus musculus 
2012-07-10 | E-GEOD-32513 | biostudies-arrayexpress
ProteomicsPseudomonas fluorescens - response to serotonin (proteomics)
Pseudomonas fluorescens MFY63 (isolated from human) was incubated with and without 100 micromolar serotonin. The cell pellets were collected after 12 or 24 hours of incubation and the proteome was extracted.
ORGANISM(S): Pseudomonas Fluorescens (ncbitaxon:294) 
2025-04-23 | MSV000097696 | MassIVE
ProteomicsPseudomonas fluorescens - metabolism of and response to serotonin
Pseudomonas fluorescens MFY63 (isolated from human) was incubated with 10 or 100 micromolar serotonin. The culture supernatants were collected after 12 or 24 hours of incubation and extracted using ethyl acetate. Negative (NEG) and positive (POS) polarity data were obtained on a HR-LC-MS/MS setup.
ORGANISM(S): Pseudomonas Fluorescens (ncbitaxon:294) 
2025-02-26 | MSV000097220 | MassIVE
MetabolomicsMetabolic network construction reveals probiotic-specific colonization resistance in a synthetic small intestinal community

The gut microbiota is essential to host health. Probiotics can be used as a microbiota targeted therapy to improve host health. However, probiotic molecular mechanisms of action and probiotics targeting the small intestinal microbiota are often not elucidated. In this study, we construct a three ...

2024-09-26 | MTBLS7370 | MetaboLights
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