Engel F F - OmicsDI

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Unknown (762)
Genomics (24)
Transcriptomics (22)
Proteomics (18)
Metabolomics (4)

Organisms

Homo sapiens (35)
Schizophyllum commune H4-8 (18)
Mycobacterium tuberculosis SP7 (18)
Mycobacterium tuberculosis SP10 (18)
Mycobacterium tuberculosis SP13 (18)
Mycobacterium tuberculosis SP22 (18)
Chlamydomonas reinhardtii (18)
Enterococcus mundtii CRL35 (18)
Oncorhynchus tshawytscha (18)
Pseudomonas canadensis (18)
Influenza A virus (A/California/04/2009(H1N1)) (18)
Pseudomonas aeruginosa PAO1H2O (18)
Human alphaherpesvirus 1 strain 17 (18)
Mycobacterium tuberculosis SP1 (18)
Marchantia polymorpha subsp. ruderalis (18)
Methylocystis sp. (18)
Exiguobacterium sp. SH31 (18)
Palaemonetes sp. common grass shrimp associated circular virus (18)
Amaranthus tricolor (18)
Spirochaeta sp. ELBA (18)
Clavibacter nebraskensis NCPPB 2581 (18)
Porites pukoensis (18)
Porphyromonas gingivalis (18)
Leishmania tarentolae (18)
Porphyromonas gingivalis W83 (18)
Human betaherpesvirus 5 (18)
Bothrops insularis (18)
Mus musculus (8)
unidentified (2)
Danio rerio (1)

Repository

biostudies-arrayexpress (23)
EGA (23)
pride (18)
MetaboLights (4)

Tissue

Cell culture (5)
Macrophage (2)
Blood plasma (2)
Secretion of lacrimal gland (1)
Rectum (1)
Connective tissue (1)
Tear (1)
Adipose tissue (1)
Neural cell (1)
Skin (1)
Oocyte (1)
Brain (1)
Dendritic cell (1)
Fibroblast (1)
Lung (1)
Epithelial cell (1)
B cell (1)
Liver (1)
Blood cell (1)
T cell (1)

Disease

Colorectal cancer (2)
Alzheimer's disease (2)
Extrapulmonary tuberculosis (1)
Lymph node tuberculosis (1)
Thanatophoric Dysplasia (1)
Stage IV colorectal cancer (1)
Swine influenza (1)
Pneumonia (1)
Chronic bronchitis (1)
Pulmonary tuberculosis (1)
Cardiovascular system disease (1)
Sjogren's Syndrome (1)
Trypanosomiasis (1)
Type 2 diabetes mellitus (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (18)
Shotgun proteomics (13)
Mass spectrometry (4)
Data-dependent acquisition (3)
Bottom-up proteomics (2)
Illumina HiSeq 2000, Affymetrics_SNP_6.0-, Illumina Genome Analyzer IIx (1)
ILLUMINA, Illumina HiSeq 2000 (1)
SWATH MS (1)
Data-independent acquisition (1)
Affinity purification coupled with mass spectrometry proteomics (1)

Instrument Platform

6460 Triple Quadrupole LC/MS (Agilent) (1)
Q Exactive (1)
5975C Series GC/MSD (Agilent) (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)
Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2010 (7)
2022 (5)
2016 (4)
2012 (4)
2023 (4)
2007 (3)
2024 (3)
2015 (2)
2026 (2)
2025 (2)
2020 (2)
2019 (2)
2014 (1)
2013 (1)
2011 (1)
2021 (1)
2017 (1)

CHEBI ID

CHEBI:18012 (3)
CHEBI:27897 (3)
CHEBI:28623 (2)
CHEBI:89843 (2)
CHEBI:30813 (2)
CHEBI:18095 (2)
CHEBI:17992 (2)
CHEBI:30805 (2)
CHEBI:16113 (2)
CHEBI:48430 (2)
CHEBI:17202 (2)
CHEBI:16856 (2)
CHEBI:17050 (2)
CHEBI:16797 (2)
CHEBI:37084 (2)
CHEBI:16345 (2)
CHEBI:16708 (2)
CHEBI:16668 (2)
CHEBI:16530 (2)
CHEBI:16283 (2)
CHEBI:16977 (2)
CHEBI:17924 (2)
CHEBI:15824 (2)
CHEBI:15428 (2)
CHEBI:14336 (2)
CHEBI:17754 (2)
CHEBI:16958 (2)
CHEBI:16610 (2)
CHEBI:15963 (2)
CHEBI:15741 (2)

Metabolite Name

Malic acid (2)
Trihydroxy octadecenoic acid (TriHOME isomer II) (1)
Trihydroxy octadecenoic acid (TriHOME isomer I) (1)
Trihydroxy octadecadienoic acid (TriHODE isomer II) (1)
Dihydroxy eicosatetraenoic acid (DiHETE) (1)
Trihydroxy octadecadienoic acid (TriHODE isomer I) (1)
Alpha-Tomatine (1)
Acetyl tryptophan (1)
Feruloyl serotonin (1)
Indole acrylic acid (1)
Caffeoyl putrescine (1)
Stearic acid butyl ester (1)
Phenylglucose (1)
NorEpinephrine (1)
N,N-Bishydroxyethyldodecanamide (1)
Glycosylglycerol (1)
Glycerol-1-phosphate (1)
Dihydroxyacetonephosphate (1)
D-Glycero-D-gulo-Heptose (1)
D-Gluconic acid-6-phosphate (1)
Cis-Oleic acid (1)
3-Methyl-piperazine-2,5-dione (1)
2-Methylfumaric acid (1)
Myo-Inositol-2-phosphate (1)
D-Fucitol (1)
Suberoyl carnitine (1)
Sarcosine (N-Methylglycine) (1)
Allopregnanolone sulfate (1)
Pregn steroid monosulfate* (1)
Methylsuccinoylcarnitine (1) (1)

Study type

Transcription profiling by array (13)
RNA-seq of coding RNA (4)
Comparative genomic hybridization by array (3)
RNA-seq of non coding RNA (2)
ChIP-seq (1)

Release Date

2023 (81)
2022 (80)
2025 (74)
2024 (73)
2021 (69)
2018 (62)
2020 (57)
2019 (43)
2017 (39)
2015 (30)
2014 (30)
2016 (29)
2010 (23)
2013 (20)
2012 (19)
2026 (16)
2011 (12)
2009 (8)
2007 (5)
2008 (4)
2001 (3)
2006 (2)
2003 (2)
2005 (1)
2002 (1)
2000 (1)
1998 (1)

Lab affiliation

Institut Européen de Chimie et de Biologie, U 1212 Inserm, Université de Bordeaux, 2 rue R.Escarpit, F-33600, Pessac, France (1)
Department of Molecular Structural Biology, Max-Planck-Institute of Biochemistry, 82152 Martinsried, Germany (1)
Bioanalytical Mass Spectrometry Group Max Planck Institute for Multidisciplinary Sciences Germany Bioanalytics Institute for Clinical Chemistry University Medical Center Goettingen Germany (1)
Institute for Tumor Biology and Experimental Therapy Georg-Speyer-Haus 60596 Frankfurt/Main Germany (1)
Fraunhofer Institute for Cell Therapy and Immunology IZI, Department Preclinical Development and Validation, Proteomics Unit, Leipzig, Germany (1)
Institute for Tumor Biology and Experimental Therapy Georg-Speyer-Haus 60596 Frankfurt/Main Germany (1)
Department of Medicine, University of Cape Town & Groote Schuur Hospital, Cape Town, South Africa (1)
Molecular Evolution and Genomics, Centre for Organismal Studies, Heidelberg University, D69120 Heidelberg, Germany (1)
Leibniz-Institut für Analytische Wissenschaften – ISAS – e.V. Otto-Hahn-Straße 6b 44227 Dortmund, Germany P: +49 (0)2 31.13 92-100 F: +49 (0)2 31.13 92-200 Albert.Sickmann@isas.de www.isas.de (1)
Friedrich-Loeffler-Institute (1)
Laboratory of Ageing and Pharmacology, Kolling Institute, The University of Sydney (1)
Medizinisches Proteom-Center, Ruhr-University Bochum and Department of Anesthesia, Intensive Care Medicine and Pain Therapy, University Hospital Knappschaftskrankenhaus Bochum (1)
Section/Core Facility Mass Spectrometry and Proteomics, University Medical Center Hamburg-Eppendorf (UKE), Martinistr. 52, 20246 Hamburg, Germany (1)
3Centro de Biología Molecular "Severo Ochoa" (CSIC-UAM). c/Nicolás Cabrera 1, Universidad Autónoma de Madrid. Cantoblanco., 28049, Madrid, Spain. (1)
ISAS Otto-Hahn-Str. 6b 44227 Dortmund Germany (1)
Emmy-Noether Research Group Cellular Proteomics and Metabolic Signaling Institute for Diabetes and Obesity Helmholtz Diabetes Center Germany (1)
Synthetic Genetic Circuits, Department of Biology, Technical University Darmstadt, Darmstadt, Germany (1)
Pacific Northwest National Laboratory (1)

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Metabolic connectivity is associated with seizure outcome in surgically treated temporal lobe epilepsies: A ¹⁸F-FDG PET seed correlation analysis.

Not available

S-EPMC9668618 | biostudies-literature

Correction for Engel et al., "Role of Endosomes in Simian Virus 40 Entry and Infection".

Not available

S-EPMC5625483 | biostudies-literature

Structural Dynamics of the Methyl-Coenzyme M Reductase Active Site Are Influenced by Coenzyme F₄₃₀ Modifications.

Not available

S-EPMC11256747 | biostudies-literature

Re-evaluation of acetic acid, lactic acid, citric acid, tartaric acid, mono- and diacetyltartaric acid, mixed acetic and tartaric acid esters of mono- and diglycerides of fatty acids (E 472a-f) as food additives.

Not available

S-EPMC7448088 | biostudies-literature

Increased uptake of the P2X7 receptor radiotracer ¹⁸ F-JNJ-64413739 in the brain and peripheral organs according to the severity of status epilepticus in male mice.

Not available

S-EPMC10108015 | biostudies-literature

The genus Macroteleia Westwood in Middle Miocene amber from Peru (Hymenoptera, Platygastridae s.l., Scelioninae).

Not available

S-EPMC4137294 | biostudies-literature

Exploring Andean High-Altitude Lake Extremophiles through Advanced Proteotyping.

Not available

S-EPMC10913102 | biostudies-literature

Comparison of gene expression profiles of MafF-/-: MafG-/-: MafK-/- embryos and MafF-/-: MafG+/+: MafK-/- embyos

MafF-/-: MafG+/+: MafK-/- mice are viable, while MafF-/-: MafG-/-: MafK-/- mice are embryonic lethal. To get an insight into the cause of the lethality of small Maf triple knockout mice, transcriptome analysis was performed using whole embyos of MafF-/-: MafG-/-: MafK-/- at E10.5 and those of MafF-...

ORGANISM(S): Mus musculus

2012-01-09 | E-GEOD-29558 | biostudies-arrayexpress

Investigations on the Transfer of Quinolizidine Alkaloids from Lupinus angustifolius into the Milk of Dairy Cows.

Not available

S-EPMC9501906 | biostudies-literature

Rapid identification of inflorescence type markers by genotyping-by-sequencing of diploid and triploid F₁ plants of Hydrangea macrophylla.

Not available

S-EPMC6651981 | biostudies-literature