Engle Nancy L NL

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Transcriptomics (2)
Metabolomics (2)
Proteomics (1)

Organisms

Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 (1)

Repository

biostudies-arrayexpress (2)
GNPS (1)
MassIVE (1)
MetaboLights (1)

Technology Type

Mass spectrometry (1)

Instrument Platform

LTQ XL (2)
Gas Chromatography MS - positive (1)

Publication Date

2013 (1)
2012 (1)
2021 (1)

CHEBI ID

CHEBI:62783 (1)
CHEBI:68950 (1)
CHEBI:176647 (1)
CHEBI:176649 (1)
CHEBI:27082 (1)
CHEBI:42383 (1)
CHEBI:42111 (1)
CHEBI:17521 (1)
CHEBI:22599 (1)
CHEBI:26984 (1)
CHEBI:17025 (1)
CHEBI:33508 (1)
CHEBI:27693 (1)
CHEBI:17822 (1)
CHEBI:15978 (1)
CHEBI:18237 (1)
CHEBI:22660 (1)
CHEBI:22653 (1)
CHEBI:18186 (1)
CHEBI:26986 (1)
CHEBI:17234 (1)
CHEBI:28300 (1)
CHEBI:29864 (1)
CHEBI:15676 (1)
CHEBI:24898 (1)
CHEBI:16934 (1)
CHEBI:25017 (1)
CHEBI:86348 (1)
CHEBI:28842 (1)
CHEBI:15428 (1)

Metabolite Name

4-methoxyresorcinol-1-O-glucoside (1)
2-methoxyhydroquinone (1)
B-sitosterol (1)
Xylotriose (1)
3-O-caffeoyl-quinic acid (1)
4-O-B-D-glucopyranosylvanillic acid (1)
A-linolenic acid (1)
Glycerol-1/3-phosphate (1)
L-dihydroorotic acid (1)
Malic acid, 4-ethyl ether (1)
B-cyano-alanine (1)
1-dimethylisopropylsilyloxy-3-methylbut-2-ene (1)
Sulphate (1)
2,4-dihydroxybutyric acid (1)
Trehalose (1)
Mannitol (1)
Threonic acid (1)
Glyceric acid (1)
Ethyl-phosphate (1)
Glutamic acid (1)
Aspartic acid (1)
Linoleic acid (1)
Phosphate (1)
Arabinose (1)
Quinic acid (1)
Shikimic acid (1)
5-oxo-proline (1)
Tryptophan (1)
Serine (1)
Asparagine (1)

Study type

Transcription profiling by array (2)

Release Date

2013 (1)
2012 (1)

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Towards engineering ectomycorrhization into switchgrass bioenergy crops via a lectin receptor-like kinase

Soil-borne microbes can establish compatible relationships with host plants, providing a large variety of nutritive and protective compounds in exchange for photosynthesized sugars. However, the molecular mechanisms mediating the establishment of these beneficial relationships remain unclear. Our pr...

2021-08-11 | MTBLS2597 | MetaboLights

The molecular response of Clostridium thermocellum ATCC 27405 to ethanol shock

Clostridium thermocellum is a Gram-positive, anaerobic, thermophilic bacterium that ferments cellulose into ethanol. It is a candidate industrial consolidated bioprocess (CBP) biocatalyst for lignocellulosic bioethanol production. However, C. thermocellum is relatively sensitive to ethanol compared ...

ORGANISM(S): Clostridium thermocellum ATCC 27405

2012-08-16 | E-GEOD-25236 | biostudies-arrayexpress

Systems Biology Analysis of Zymomonas mobilis ZM4 Ethanol Stress Responses

Background Zymomonas mobilis ZM4 is a capable ethanologenic bacterium with high ethanol productivity and ethanol tolerance. Previous studies indicated that several stress-related proteins and changes in the ZM4 membrane lipid composition may contribute to ethanol tolerance. However, the molecular m...

ORGANISM(S): Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821

2013-09-04 | E-GEOD-21165 | biostudies-arrayexpress

GNPS - Integrated omics analysis reveals metabolic adaptation of Clostridium thermocellum to lignocellulose-derived growth inhibitors released during the deconstruction of switchgrass

Integrated omics analysis reveals metabolic adaptation of Clostridium thermocellum to lignocellulose-derived growth inhibitors released during the deconstruction of switchgrass

ORGANISM(S): Hungateiclostridium Thermocellum (ncbitaxon:1515)

MSV000080128 | GNPS