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ProteomicsEnhanced sample multiplexing-based targeted proteomics with intelligent data acquisition
Targeted proteomics has been playing an increasingly important role in hypothesis-driven protein research and clinical bi-omarker discovery. We have previously created a workflow, Tomahto, to enable real-time targeted pathway proteomics assays using two-dimensional multiplexing technology. Coupled w...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2024-08-14 | MSV000095604 | MassIVE
UnknownIn Vivo Fast Photochemical Oxidation of Proteins Using Enhanced Multiplexing Proteomics.
Not available
S-EPMC7815197 | biostudies-literature
ProteomicsProfiling Yeast Deletion Strains using Sample Multiplexing and Network-based Analyses
The yeast, Saccharomyces cerevisiae, is a widely used model system for investigating conserved biological functions and pathways. Advancements in sample multiplexing have facilitated the study of the yeast proteome, yet many yeast proteins remain uncharacterized or only partially characterized. The ...
ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast) 
2022-09-02 | PXD032042 | Pride
Deletion strains Yko Rts-ms3 Yeast Tmtpro 
ProteomicsSample multiplexing-based targeted pathway proteomics with real-time analytics reveals the impact of genetic variation on protein expression
Targeted proteomics plays a specialized role in hypothesis-driven research where the expression of cohorts of dozens of proteins related by function, disease, co-expression, localization, or class are measured after perturbing a pathway. Moreover, a major advance in proteomics is the ability to comb...
ORGANISM(S): Mus musculus (Mouse) 
2023-03-11 | PXD029461 | Pride
Sample multiplexing Mouse proteome Tmt Targeted proteomics 
UnknownBidirectional wavelength-division-multiplexing fibre-free-space optical communications using polarisation multiplexing technique and tunable optical vestigial sideband filter.
Not available
S-EPMC11384873 | biostudies-literature
UnknownSpike Count Analysis for MultiPlexing Inference (SCAMPI).
Not available
S-EPMC11419138 | biostudies-literature
TranscriptomicsProbability of stealth multiplets in sample-multiplexing for droplet-based single-cell analysis
These datasets are test datasets of sample-multiplexed scRNA-seq, consisting of cDNA (transcriptome) and sample barcode read files: Three-sample multiplexing experiment (JS009) is a MULTI-seq dataset containing mesenchyme embryonic hind limb bud cells, embryonic stem (ES) cells, and NIH3T3 cells. Ea...
ORGANISM(S): Mus musculus 
2024-01-09 | E-MTAB-13181 | biostudies-arrayexpress
GenomicsImpact of sample multiplexing on detection of bacteria and antimicrobial resistance genes in pig microbiomes using long-read sequencing
Impact of sample multiplexing on detection of bacteria and antimicrobial resistance genes in pig microbiomes using long-read sequencing
PRJEB86838 | ENA
UnknownSample multiplexing for retinal single-cell RNA sequencing.
Not available
S-EPMC11576387 | biostudies-literature
ProteomicsProteome-wide abundance profiling of yeast deletion strains for GET pathway members using sample multiplexing
The GET pathway is associated with post-translational delivery of tail-anchored (TA) proteins to the endoplasmic reticulum (ER) in yeast, as well as other eukaryotes. Moreover, dysfunction of the GET pathway has been associated with various pathological conditions. In this study, we used yeast delet...
ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast) 
2023-12-28 | PXD044391 | Pride
Faims Tmtpro Rts-ms3 Get pathway Isobaric tagging 
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