Enzyme assays - OmicsDI

Show results for

Unknown (10251)
Transcriptomics (1155)
Proteomics (911)
Genomics (539)
Metabolomics (119)
Other (18)
Models (11)
Methylation profiling (6)
Multiomics (4)
Genomic (1)
Clinical (1)

Organisms

Homo sapiens (640)
Mus musculus (277)
Rattus norvegicus (41)
Saccharomyces cerevisiae (37)
Arabidopsis thaliana (35)
Caenorhabditis elegans (33)
Drosophila melanogaster (32)
Danio rerio (13)
synthetic construct (8)
Escherichia coli (8)
Thermus thermophilus HB8 (7)
Streptomyces coelicolor (7)
Aspergillus niger (7)
Vitis vinifera (7)
Staphylococcus aureus (7)
Corynebacterium glutamicum (6)
Escherichia coli str. K-12 substr. MG1655 (6)
Gallus gallus (5)
Streptococcus pneumoniae D39 (5)
Apis mellifera (5)
Campylobacter jejuni (5)
Bos taurus (5)
Candida albicans (5)
Taeniopygia guttata (4)
Pseudomonas putida (4)
Streptococcus mutans (4)
Eugenia uniflora (3)
Leishmania donovani (3)
Spodoptera frugiperda (2)
Plasmodium falciparum (2)

Organisms

Homo sapiens (101)
Mus musculus (56)
Rattus norvegicus (10)
Danio rerio (4)
Arabidopsis thaliana (4)
Thermothelomyces thermophilus ATCC 42464 (3)
Drosophila melanogaster (3)
Oncorhynchus mykiss (3)
Saccharomyces cerevisiae (3)
synthetic construct (3)
soil metagenome (3)
Escherichia coli str. K-12 substr. MG1655 (2)
Synechocystis sp. PCC 6803 (2)
Piper sarmentosum (2)
Aspergillus niger (2)
Phlebovirus riftense (1)
Rhodococcus aerolatus (1)
Gluconobacter oxydans 621H (1)
Clostridium drakei (1)
Lupinus angustiflorus (1)
Scutellaria viscidula (1)
Streptococcus suis P1/7 (1)
Cellvibrio japonicus (1)
Saccharomyces cerevisiae CEN.PK113-7D (1)
Amorphotheca resinae (1)
Echium plantagineum (1)
Androctonus amoreuxi (1)
Lupinus angustifolius (1)
Cornus officinalis (1)
Amphidinium carterae (1)

Repository

biostudies-arrayexpress (1120)
pride (720)
ENA (372)
geo (210)
MetaboLights (113)
MassIVE (70)
jPOST (45)
EGA (36)
iProX (36)
PanoramaPublic (21)
BioModels (10)
GNPS (6)
LINCS (3)
GPMDB (2)
Cell Collective (1)
dbGaP (1)
EVA (1)
PAXDB (1)
PeptideAtlas (1)

Tissue

Cell culture (175)
Epithelial cell (56)
Brain (31)
Blood plasma (24)
Permanent cell line cell (23)
Blood (19)
Liver (18)
Kidney (16)
Leaf (14)
Fibroblast (12)
HeLa cell (12)
Lung (12)
B cell (11)
Blood cell (11)
Blood serum (11)
Macrophage (10)
Plant cell (10)
Whole body (10)
Cell suspension culture (9)
Root (8)
Stem cell (8)
Colon (7)
Embryo (7)
Bone marrow (6)
Embryonic stem cell (6)
T cell (6)
Type II pneumocyte (6)
Breast cancer cell (5)
Monocyte (5)
Others (1)

Disease

Breast cancer (27)
Normal (6)
Lymphoma (5)
Neuroblastoma (2)
Glaucoma (1)
Metabolic syndrome (1)
Tumor (1)
Spindle cell tumor (1)
Not applicable (1)
Active Crohn's disease (1)
HIV (1)
Apert syndrome (1)
Non-metastatic melanoma (1)
Limited cutaneous subset (1)
No tendon xanthomas (1)
Dukes D primary colon cancer (1)
Colon cancer metastasis (1)
Infected (1)
Type 1 Diabetes Mellitus (1)
IBDV infected (1)
Phytophthora capsici infected (1)
Benign adenoma (1)
Cancer (1)
Renal cell carcinoma (1)
Plasmodium berghei CTRP knockout strain (Dessens et al., 1999) infection (1)
Chicken Anaemia Virus infected (1)
S enteritidis (1)
Acute promyelocytic leukemia (1)
Adenocarcinoma (1)
Breast carcinoma (1)

Technology Type

Mass Spectrometry (720)
Shotgun proteomics (331)
Bottom-up proteomics (185)
Data-dependent acquisition (98)
Affinity purification coupled with mass spectrometry proteomics (92)
Mass spectrometry (64)
Data-independent acquisition (56)
Mass spectrometry assay (47)
Gel-based experiment (42)
SWATH MS (26)
Chemical cross-linking coupled with mass spectrometry proteomics (22)
SRM/MRM (19)
Top-down proteomics (13)
HDMSE (6)
Immunopeptidomics (6)
NMR spectroscopy (4)
All-ion fragmentation (4)
DiaPASEF (4)
Chemiluminescence (3)
ELISA (3)
Proteogenomics (3)
RNA mass spectrometry (2)
ABI_SOLID, Illumina HiSeq 2000, Illumina 450K, AB 5500xl Genetic Analyzer, AB 5500 Genetic Analyzer, ILLUMINA (1)
Illumina HiSeq 2000 (1)
Illumina MiSeq (1)
Illumina Genome Analyzer II (1)
Affinity proteomics (1)

Instrument Platform

Illumina NovaSeq 6000 (28)
NextSeq 500 (26)
Illumina HiSeq 2500 (19)
Illumina HiSeq 2000 (18)
Illumina HiSeq 4000 (8)
NextSeq 550 (6)
DNBSEQ-G400 (5)
Illumina MiSeq (5)
Illumina Genome Analyzer IIx (4)
NextSeq 2000 (4)
Illumina Genome Analyzer II (3)
Illumina NovaSeq X (3)
Illumina HiSeq 3000 (3)
Maxwell 16 LEV-plant RNA kit (2)
See manuscript (2)
NucleoSpin RNA/Protein kit lysis buffer (350 µL per tube; Macherey‑Nagel). (2)
Dell PowerEdge R750; CPU: 2 × Intel Xeon Gold 6346 (32 Cores / 64 Threads); RAM: 188 GB (2)
GeneChip Scanner 3000 [Affymetrix] (2)
G2565BA DNA microarray scanner [Agilent] (2)
Illumina HiSeq 2000 platform (1)
KAPA RNA HyperPrep Kit (1)
High-performance computing workstation (1)
Protocol computer workstation running R statistical software (1)
Thermal cycler (PCR); Covaris ME220 focused ultrasonicator; magnetic separation rack; Agilent TapeStation system (D5000 and D1000 ScreenTape assays); Qubit fluorometer or equivalent; microcentrifuge. (1)
JANUS® G3 MDT automated liquid handling workstation (PerkinElmer); thermal cycler or incubator (42 °C); Zymo DNA Clean & Concentrator columns; AMPure XP magnetic bead purification system; magnetic separation rack. (1)
Multichannel pipettes or automated liquid handler; 384-well tissue culture plates; Class II biological safety cabinet; CO₂ incubator (37 °C, 5% CO₂). (1)
Quick-DNA 96 kit (Zymo) (1)
Nanodrop 2000c spectrophotometer (1)
Illumina NovaSeq 6000 sequencing platform (Illumina) (1)
FastPrep-24 5G bead beater, Qubit Fluorometer (1)

Publication Date

2025 (265)
2026 (216)
2010 (193)
2024 (159)
2015 (124)
2012 (123)
2021 (120)
2014 (118)
2013 (117)
2023 (113)
2022 (113)
2016 (111)
2011 (102)
2019 (83)
2008 (77)
2020 (72)
2017 (54)
2018 (53)
2009 (52)
2007 (41)
2005 (20)
2006 (16)
2004 (2)
2003 (1)

UNIPROT ID/AC

AGL10_HALVD (1)
AGL6_HALVD (1)
AGL7_HALVD (1)
AGLB_HALVD (1)
AGLG_HALVD (1)
AGLP_HALVD (1)
ALF_HALVD (1)
ANTRB_HALVD (1)
CAS5_HALVD (1)
CAS6_HALVD (1)
CAS7_HALVD (1)
CAS8B_HALVD (1)
CETZ1_HALVD (1)
CETZ6_HALVD (1)
CSG_HALVD (1)
D4GP04_HALVD (1)
D4GP38_HALVD (1)
D4GP47_HALVD (1)
D4GP49_HALVD (1)
D4GP51_HALVD (1)
D4GP72_HALVD (1)
D4GP86_HALVD (1)
D4GP88_HALVD (1)
D4GPA0_HALVD (1)
D4GPA1_HALVD (1)
D4GPA8_HALVD (1)
D4GPB6_HALVD (1)
D4GPB9_HALVD (1)
D4GPC8_HALVD (1)
D4GPD3_HALVD (1)

ENSEMBL ID

ENSG00000170477 (1)
ENSG00000229353 (1)

CHEBI ID

CHEBI:15428 (15)
CHEBI:15741 (13)
CHEBI:15891 (13)
CHEBI:30769 (12)
CHEBI:28044 (11)
CHEBI:6650 (11)
CHEBI:18012 (11)
CHEBI:15611 (10)
CHEBI:16811 (10)
CHEBI:17368 (10)
CHEBI:18186 (9)
CHEBI:27897 (9)
CHEBI:25094 (9)
CHEBI:18237 (9)
CHEBI:28300 (9)
CHEBI:25017 (9)
CHEBI:1148 (9)
CHEBI:30617 (1)
CHEBI:14314 (1)
CHEBI:17111 (1)
CHEBI:48153 (1)
CHEBI:15721 (1)
CHEBI:16332 (1)
CHEBI:17797 (1)
CHEBI:17363 (1)
CHEBI:18009 (1)
CHEBI:16863 (1)
CHEBI:17138 (1)
CHEBI:16474 (1)
CHEBI:15946 (1)

Metabolite Name

Taurine (22)
Choline (16)
Creatine (16)
Hypoxanthine (15)
Uracil (14)
Methionine (14)
Adenosine (14)
L-Phenylalanine (14)
Leucine (13)
Betaine (13)
Phenylalanine (13)
L-Glutamine (13)
Inosine (13)
Histidine (12)
Thymine (12)
Pantothenic acid (12)
Nicotinamide (12)
Fumaric acid (12)
Xanthosine (12)
Citric acid (12)
Isoleucine (12)
Glutaric acid (12)
Guanosine (12)
Uridine (12)
Creatinine (12)
Valine (11)
Indole (11)
Cytosine (11)
Sarcosine (11)
Riboflavin (11)

First Public Date

2025 (84)
2026 (71)
2024 (38)
2023 (30)
2014 (29)
2022 (23)
2021 (18)
2019 (15)
2015 (14)
2018 (13)
2020 (12)
2017 (10)
2013 (8)
2016 (7)

Modelling Approach

Computational model (5)
Ordinary differential equation model (4)
Constraint-based model (1)

Study status

Recruiting (1)

Lab affiliation

University of Vienna, Faculty of Chemistry, Department of Analytical Chemistry (8)
Dr. Matthias Gstaiger ETH Zürich Institute of Molecular Systems Biology Otto-Stern-Weg 3 8093 Zürich Switzerland (5)
ETH Zürich Institute of Molecular Systems Biology HPM F43 Otto-Stern-Weg 3 8093 Zürich Switzerland (5)
Head of the Curie Institute Mass Spectrometry Platform (5)
Biognosys AG (4)
Department of Biology, IISER Pune (4)
King's College London (4)
Medical Proteomics Unit, Research Department, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok, Thailand (4)
Thoracic Oncology Molecular Medicine Program Moffitt Cancer Center Tampa, FL, USA (4)
Department of Biochemistry and Functional Proteomics, Institute of Biology II, Faculty of Biology and BIOSS Centre for Biological Signalling Studies, University of Freiburg, 79104 Freiburg im Breisgau, Germany (3)
Department of Chemistry, Imperial College London, Molecular Research Science Hub, 80 Wood Lane, London W12 0BZ, United Kingdom. The Francis Crick Institute, 1 Midland Road, London NW1 1AT, United Kingdom. (3)
Department of Pediatrics, University of Groningen, University Medical Center Groningen (UMCG), 9713 AV Groningen, The Netherlands (3)
Fred Hutchinson Cancer Research Center (3)
The Sixth Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong, China (3)
1 Department of Biology, Institute of Molecular Systems Biology, ETH Zurich, Auguste-Piccard-Hof 1, 8093 Zurich, Switzerland 2 Faculty of Science, University of Zurich, Zurich, Switzerland (2)
Chair of Proteomics and Bioanalytics Technische Universitaet Muenchen Partner Site of the German Cancer Consortium Emil Erlenmeyer Forum 5 85354 Freising Germany (2)
Chair of Proteomics and Bioanalytics, Technical University of Munich, Germany (2)
Department of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461, United States (2)
Department of Biology – Cellular Proteostasis and Mass Spectrometry, University of Konstanz (2)
Department of Biology, Institute of Microbiology, ETH Zürich, Switzerland (2)
Department of Cell and Molecular Biology, College of Medicine, Chang Gung University, Taoyuan, Taiwan (2)
Department of Immunology, College of Basic Medical Science, China Medical University, Shenyang, Liaoning 110122, China (2)
Department of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden (2)
Department of Pathology and Duke Cancer Institute, Duke University School of Medicine, Durham, NC 27710, USA (2)
Department of Pathology and Laboratory Medicine, Emory University, Atlanta, GA, United States (2)
Department of Plant Systems Biology, University of Hohenheim, 70599 Stuttgart, Germany (2)
Department of Plant and Microbial Biology, University of California at Berkeley, Berkeley, CA 94720, USA Plant Gene Expression Center, U.S. Department of Agriculture Agricultural Research Service, Albany, CA 94710, USA (2)
Dept. of Molecular Biosciences, University of Texas at Austin, Texas 78712 USA (2)
Drug Discovery Moffitt Cancer Center Tampa, FL, USA (2)
EDyP (2)

IsPrivate

False (10)

Model Flag

Non Kinetic (2)
Non Miriam (1)

Submitter Keywords

Ersilia (5)
Machine Learning Model (5)
FAIR-AIML (2)

Classification

bacteria (14)
fungi (3)
viruses (1)

Modification

4-tetrahydrothiazine-3-carboxylic acid (4)
N6-dimethyl-L-lysine (2)
-17.026549 (1)
-18.010565 (1)
15.994915 (1)
2x(15)N labeled L-lysine (1)
4 (1)
42.010565 (1)
57.021464 (1)
N6 (1)

Study type

Transcription profiling by array (615)
RNA-seq of coding RNA (130)
ChIP-seq (81)
ChIP-chip by array (30)
Other (30)
ChIP-chip by tiling array (28)
Transcription profiling by tiling array (28)
Unknown experiment type (22)
Transcription profiling by RT-PCR (18)
RNA-seq of non coding RNA (17)
RNA-seq of coding RNA from single cells (13)
DNA-seq (12)
Comparative genomic hybridization by array (11)
Proteomic profiling by array (11)
Methylation profiling by array (10)
MicroRNA profiling by array (8)
Methylation profiling by high throughput sequencing (7)
ATAC-seq (6)
Cell line - High-throughput sequencing (5)
Antigen profiling (5)
RNAi profiling by array (4)
GRO-seq (2)
Cell line - One-color microarray (2)
High-throughput sequencing (2)
Animal - High-throughput sequencing (2)
Hi-C (2)
RIP-seq (2)
RNA-seq of total RNA (2)
Cell line - Single-cell sequencing (1)
Human - High-throughput sequencing (1)

Release Date

2025 (1231)
2022 (1095)
2021 (967)
2023 (930)
2024 (844)
2020 (796)
2019 (620)
2018 (543)
2017 (497)
2015 (486)
2016 (439)
2014 (435)
2010 (386)
2012 (359)
2013 (356)
2011 (321)
2009 (200)
2008 (199)
2026 (191)
2007 (121)
2006 (70)
2005 (70)
2004 (45)
2001 (35)
2003 (31)
2002 (31)
1999 (27)
2000 (24)
1998 (19)
1997 (1)

Location

South Korea (1)

Previous page
1 / 1303
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 1303
Next page

Sort by:

Relevance

Page size

LC_MS Dataset for Morin Detection in Phoebe Wood Extracts, Enzyme Assays and Transgenic Populus

This dataset contains LC-MS data generated for the detection of morin in plant tissues and enzymatic reactions related to flavonoid biosynthesis. The samples include methanol extracts of wood tissues from Phoebe species (including Phoebe zhennan and related Lauraceae species), in vitro enzyme rea...

2026-03-26 | MTBLS14137 | MetaboLights

Metabolite control of enzyme activity links stress to biosynthetic regulation

Cells must continuously adjust metabolic output to maintain homeostasis under changing environmental conditions, yet the mechanisms that enable rapid and reversible control of pathway activity remain largely unknown. The methylerythritol phosphate (MEP) pathway, of bacterial origin and conserved ...

2026-02-04 | MTBLS12456 | MetaboLights

Assessing the Feasibility of In Vitro Assays in Combination with Biological Matrices to Screen for Endogenous CYP450 Phenotype Biomarkers Using an Untargeted Metabolomics Approach—A Proof of Concept Study

Cytochrome P450 (CYP) enzymes are crucial for drug metabolism, yet inter-individual variability in their activity remains a significant clinical challenge. Current phenotyping methods are often impractical or even impossible, particularly in forensic toxicology and vulnerable populations. This pr...

2025-12-12 | MTBLS13325 | MetaboLights

Bioaccumulation of therapeutic drugs by human gut bacteria (L.saccharolytica;Standards assays)

Bacteria in the gut can modulate the availability and efficacy of therapeutic drugs. Interactions at this level have only recently started to being systematically mapped and the main underlying mechanism proposed is chemical transformation of drugs by microbes (biotransformation). Here, we invest...

2021-07-20 | MTBLS2885 | MetaboLights

Bioaccumulation of therapeutic drugs by human gut bacteria (E.coli;C.saccharolyticum;S.salivarius;E.rectale;L.plantarum;L.lactis assays)

2021-07-20 | MTBLS1627 | MetaboLights

Bioaccumulation of therapeutic drugs by human gut bacteria (B.animalis assays)

2021-07-20 | MTBLS1264 | MetaboLights

Bioaccumulation of therapeutic drugs by human gut bacteria: secreted metabolite analysis for resting cells (B.uniformis;C.saccharolyticum assays)

2021-07-20 | MTBLS1757 | MetaboLights

Bioaccumulation of therapeutic drugs by human gut bacteria: secreted metabolite analysis (FIA-MS) (C.saccharolyticum;E.coli;L.plantarum;L.lactis;S.salivarius assays)

2021-07-20 | MTBLS1791 | MetaboLights

Bioaccumulation of therapeutic drugs by human gut bacteria: duloxetine accumulation at different concentrations (L.saccharolytica;E.coli assays)

2021-07-20 | MTBLS1319 | MetaboLights

The genomic and enzymatic basis for iridoid biosynthesis in cat thyme (Teucrium marum)

Iridoids are non-canonical monoterpenoids produced by both insects and plants. An example is the cat attracting and insect repelling volatile iridoid nepetalactone, produced by Nepeta sp. (catmint) and aphids. Recently, both nepetalactone biosynthetic pathways were elucidated, showing a remarkable c...

2026-04-20 | MTBLS9357 | MetaboLights

Previous page
1 / 1303
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 1303
Next page

Sort by:

Relevance

Page size

13021 Results

Show results for

Organisms

Organisms

Repository

Tissue

Disease

Technology Type

Instrument Platform

Publication Date

UNIPROT ID/AC

ENSEMBL ID

CHEBI ID

Metabolite Name

First Public Date

Modelling Approach

Study status

Lab affiliation

Tags

IsPrivate

Model Flag

Submitter Keywords

Classification

Modification

Study type

Release Date

Location

OmicsDI is part of the ELIXIR infrastructure

Tweets