Ernst S S - OmicsDI

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Unknown (2059)
Transcriptomics (71)
Proteomics (65)
Genomics (30)
Metabolomics (23)
Models (4)
Other (1)

Organisms

Homo sapiens (52)
Mus musculus (18)
Fagus sylvatica (9)
Escherichia coli (8)
Staphylococcus aureus (7)
Sus scrofa (6)
Meleagris gallopavo (4)
Candida albicans (4)
Saccharomyces cerevisiae (4)
Bos taurus (3)
Caenorhabditis elegans (3)
Bacillus subtilis (2)
Canis lupus familiaris (2)
Drosophila melanogaster (2)
Arabidopsis thaliana (2)
Pseudomonas aeruginosa (2)
Bacillus pumilus (2)
Tribolium castaneum (1)
Chlamydomonas reinhardtii (1)
Yersinia pestis (1)
Aspergillus fumigatus (1)
Francisella tularensis (1)
Cricetulus griseus (1)
46170 (1)
Actinoplanes sp. SE50/110 (1)
Desulfatiglans sp. (1)
Enterobacter cloacae (1)
Enterococcus faecalis (1)
Escherichia phage HildyBeyeler (1)
Formosa agariphila KMM 3901 (1)

Organisms

Staphylococcus aureus (7)
Homo sapiens (1)
Mus musculus (1)

Repository

biostudies-arrayexpress (81)
pride (58)
MetaboLights (20)
EGA (11)
ENA (9)
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GNPS (3)
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PeptideAtlas (1)

Tissue

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Disease

Bacterial infectious disease (2)
Myelolipoma (1)
Not Available (1)
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Head and neck cancer (1)
Mixed disorder as reaction to stress (1)
Myeloproliferative neoplasm (1)
Perrault syndrome (1)

Technology Type

Mass Spectrometry (58)
Shotgun proteomics (29)
Mass spectrometry (12)
Bottom-up proteomics (12)
Data-independent acquisition (9)
Data-dependent acquisition (8)
Affinity purification coupled with mass spectrometry proteomics (7)
Top-down proteomics (5)
Mass spectrometry assay (4)
NMR spectroscopy (4)
Chemical cross-linking coupled with mass spectrometry proteomics (4)
Gel-based experiment (3)
Affinity proteomics (2)
HDMSE (2)
ILLUMINA, Illumina HiSeq 2500, HiSeq X Ten, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000 (1)
NMR spectroscopy assay (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (7)
Q Exactive (4)
Bruker (4)
Liquid Chromatography MS - negative - reverse phase (4)
Liquid Chromatography MS - alternating - reverse phase (3)
Illumina HiSeq 2500 (2)
Xevo G2 Q-Tof (2)
Liquid Chromatography MS - positive (2)
Illumina NovaSeq 6000 (1)
Illumina HiSeq 2000 (1)
Illumina HiSeq 3000 (1)
NextSeq 500 (1)
Instrument (1)
Orbitrap Eclipse (1)
Q Exactive HF (1)
Direct infusion MS - positive (1)
LTQ Velos (Thermo Scientific) (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - alternating - reverse-phase (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - positive - hilic (1)
Nuclear Magnetic Resonance (NMR) - (1)
LTQ (1)

Publication Date

2010 (25)
2011 (13)
2025 (12)
2022 (11)
2015 (11)
2023 (11)
2019 (10)
2026 (9)
2013 (9)
2024 (8)
2017 (8)
2018 (7)
2016 (7)
2007 (5)
2020 (5)
2014 (4)
2009 (4)
2012 (3)
2008 (2)
2021 (2)

UNIPROT ID/AC

128UP_DROME (1)
140U_DROME (1)
1433E_DROME (1)
1433Z_DROME (1)
18C_DROME (1)
2AAA_DROME (1)
2ABA_DROME (1)
3BP5H_DROME (1)
3HIDH_DROME (1)
41_DROME (1)
5HT2A_DROME (1)
5NT3B_DROME (1)
60A_DROME (1)
6PGD_DROME (1)
6PGL_DROME (1)
7227.FBpp0070052 (1)
7227.FBpp0070054 (1)
7227.FBpp0070575 (1)
7227.FBpp0071052 (1)
7227.FBpp0073589 (1)
7227.FBpp0074613 (1)
7227.FBpp0074882 (1)
7227.FBpp0076702 (1)
7227.FBpp0076767 (1)
7227.FBpp0077066 (1)
7227.FBpp0077462 (1)
7227.FBpp0078238 (1)
7227.FBpp0079696 (1)
7227.FBpp0080317 (1)
7227.FBpp0080495 (1)

CHEBI ID

CHEBI:18186 (4)
CHEBI:28300 (4)
CHEBI:30769 (4)
CHEBI:35038 (4)
CHEBI:15428 (3)
CHEBI:15741 (3)
CHEBI:15756 (3)
CHEBI:16196 (3)
CHEBI:16235 (3)
CHEBI:16359 (3)
CHEBI:16449 (3)
CHEBI:16551 (3)
CHEBI:16737 (3)
CHEBI:24898 (3)
CHEBI:25017 (3)
CHEBI:25094 (3)
CHEBI:27432 (3)
CHEBI:27997 (3)
CHEBI:28716 (3)
CHEBI:28865 (3)
CHEBI:32816 (3)
CHEBI:34687 (3)
CHEBI:73858 (3)
CHEBI:75342 (3)
CHEBI:78320 (3)
CHEBI:16134 (2)
CHEBI:32484 (2)
CHEBI:116314 (2)
CHEBI:139138 (2)
CHEBI:143745 (2)

Metabolite Name

Cholic acid (3)
Elaidic acid (3)
Glutamate (3)
Tris(2-butoxyethyl) phosphate (3)
(2S,3S,4S,5R,6R)-6-[[(3S,4S,6aR,6bS,8aR,9R,12aS,14bR)-9-hydroxy-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-5-[(2S,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxyoxane-2-carboxylic acid (2)
1-({[2-(2-furylmethyl)-5-methylpyrrolidinyl]amino}methylene)-7-[8-({[2-(2-fury lmethyl)pyrrolidinyl]amino}methylene)-1,6-dihydroxy-3-methyl-5-(methylethyl)-7 -oxo(2-naphthyl)]-3,8-dihydroxy-6-methyl-4-(methylethyl)naphthalen-2-one (2)
1-Stearoyl-2-hydroxy-sn-glycero-3-phosphocholine (2)
2,6-Di-tert-butyl-4-hydroxymethylphenol (2)
9(10)-EpOME (2)
Acetate (2)
Alpha-linolenic acid|linolenic acid|(9Z,12Z,15Z)-octadeca-9,12,15-trienoic acid (2)
Butylparaben (2)
Cholesterol (2)
Dibutyl phthalate (DBP) (2)
Diethyl phthalate (2)
Genistein (2)
Glycine (2)
Histidine (2)
L-tyrosine (2)
Lyso-PC(16:0) (2)
Monoolein (2)
NCGC00385123-01_C22H30O6_7b,9-Dihydroxy-3-(hydroxymethyl)-1,1,6,8-tetramethyl-5-oxo-1,1a,1b,4,4a,5,7a,7b,8,9-decahydro-9aH-cyclopropa[3,4]benzo[1,2-e]azulen-9a-yl acetate (2)
Oleic acid (2)
Spermidine (2)
Taurocholic acid (2)
(+)-Pyroglutamic acid (1)
(+/-)-Pipecolate (1)
(+/-)-Propionylcarnitine chloride (1)
(-)-Tetradecanoylcarnitine (1)
(10E)-12-Oxododecenoic acid (1)

First Public Date

2014 (5)
2017 (4)

Modelling Approach

Ordinary differential equation model (2)

Lab affiliation

Andreas Otto, Institute for Microbiology, Ernst-Moritz-Arndt-University of Greifswald, F.-L. Jahnstrasse 15, 17489 Greifswald, Germany (2)
Center for Functional Protein Assemblies, Department of Bioscience, TUM School of Natural Sciences, Technical University of Munich, Ernst-Otto-Fischer-Straße 8, 85748 Garching, Germany (2)
Institute for Microbiology Department of Microbial Proteomics Ernst-Moritz-Arndt-University Greifswald F.-L.-Jahn-Str. 15 17489 Greifswald phone: +49 3834 864073 fax: +49 3834 864202 (2)
TUM School of Natural Sciences, Department Biosciences, Chair of Organic Chemistry II, Center for Functional Protein Assemblies (CPA), Technical University Munich (TUM), Ernst-Otto-Fischer Str. 8, Garching, 85748, Germany (2)
University of Copenhagen, Section of Microbiology (2)
Analytics Core Facility Essen (ACE), Chemische Biologie, Universität Duisburg-Essen, ZMB, Germany (1)
Center for Functional Protein Assemblies, Department of Bioscience, TUM School of Natural Sciences, Technical University of Munich, Ernst-Otto-Fischer-Straße 8, 85748 Garching, Germany. (1)
Center for Functional Protein Assemblies, Department of Bioscience, TUM School of Natural Sciences, Technical University of Munich, Ernst-Otto-Fischer-Straße 8, 85748 Garching, Germany. (1)
Center for Functional Protein Assemblies, Department of Bioscience, TUM School of Natural Sciences, Technical University of Munich, Ernst-Otto-Fischer-Straße 8, D-85748 Garching, Germany (1)
Center for Functional Protein Assemblies, TUM School of Natural Sciences, Technical University of Munich, Ernst-Otto-Fischer-Straße 8, 85748 Garching, Germany. (1)
Center for Functional Protein Assemblies, Technical University of Germany, Germany (1)
Center for Protein Assemblies and Department of Chemistry, Technische Universität München, Ernst-Otto-Fischer Strasse 8, 85747 Garching, Germany (1)
Center for Protein Assemblies and Department of Chemistry, Technische Universität München, Ernst-Otto-Fischer Strasse 8, 85748 Garching, Germany (1)
Center for Protein Assemblies, Department of Chemistry, Technische Universität München, Ernst-Otto-Fischer Str. 8, 85747 Garching, Germany (1)
Center for Protein Assemblies, Department of Chemistry, Technische Universität München, Ernst-Otto-Fischer-Straße 8, 85747 Garching, Germany (1)
Centre for Functional Protein Assemblies, Technical University of Munich, Ernst-Otto-Fischer-Straße 8, D-85748 Garching, Germany. (1)
Centre for Organismal Studies (COS) Heidelberg Im Neuenheimer Feld 360 69120 Heidelberg Fon +49 6221 54-6286 Fax +49 6221 54-5859 (1)
Chair of Organic Chemistry II TU München Ernst-Otto-Fischer-Straße 8 D-85748 Garching Germany (1)
Chair of Proteomics and Bioanalytics, Technical University of Munich (TUM), Freising, Germany (1)
Core Facility for Mass Spectrometry and Proteomics, Center for Molecular Biology of Heidelberg University (ZMBH), DKFZ-ZMBH Alliance, 69120 Heidelberg, Germany (1)
Core Facility for Medical Bioanalytics, Institute for Ophthalmic Research, Eberhard Karls University of Tübingen, 72076 Tübingen, Germany (1)
Department of Chemistry, Chair of Organic Chemistry II, Center for Functional Protein Assemblies (CPA), Technical University of Munich, Ernst-Otto-Fischer Straße 8, 85748 Garching, Germany (1)
Department of Life Technologies, InFLAMES Flagship, University of Turku, 20520 Turku, Finland (1)
Department of Microbial Proteomics and Mass Spectrometry, Ernst-Moritz-Arndt-University Greifswald, Germany (1)
Department of Microbial Proteomics, Institute for Microbiology, Ernst-Moritz-Arndt-University-Greifswald, Friedrich-Ludwig-Jahn-Straße 15, 17487 Greifswald (1)
Dr Stephan A. Sieber, TUM Center for Functional Protein Assemblies (CPA), Department of Chemistry and Chair of Organic Chemistry II, Technical University of Munich, Lichtenbergstraße 4, 85748 Garching, Germany. (1)
Dr. Andreas Otto Institute for Microbiology Department of Microbial Proteomics Ernst-Moritz-Arndt-University Greifswald F.-L.-Jahn-Str. 15 17489 Greifswald (1)
Dr. Andreas Otto Institute for Microbiology Department of Microbial Proteomics Ernst-Moritz-Arndt-University Greifswald F.-L.-Jahn-Str. 15 17489 Greifswald phone: +49 3834 4205920 fax: +49 3834 4205902 (1)
Dörte Becher Department of Microbial Proteomics, Institute for Microbiology, Ernst-Moritz-Arndt-University Greifswald, Friedrich-Ludwig-Jahnstraße 15a, 17489 Greifswald, Germany (1)
Ernst-Moritz-Arndt University Greifswald Institute of Microbiology Friedrich-Ludwig-Jahn-Strasse 15 D-17487 Greifswald, Germany (1)

IsPrivate

False (2)

Classification

bacteria (7)

Study type

Transcription profiling by array (46)
ChIP-seq (9)
Comparative genomic hybridization by array (8)
RNA-seq of coding RNA (7)
Unknown experiment type (3)
Genotyping by array (2)
Other (2)
Animal - High-throughput sequencing (1)
Spatial transcriptomics by high-throughput sequencing (1)
DNA-seq (1)
Methylation profiling by array (1)

Release Date

2022 (221)
2021 (213)
2023 (208)
2025 (189)
2024 (176)
2020 (156)
2018 (126)
2017 (121)
2019 (108)
2016 (108)
2015 (85)
2014 (69)
2010 (64)
2011 (62)
2012 (61)
2013 (59)
2026 (37)
2009 (29)
2008 (13)
2007 (12)
2005 (6)
2006 (5)
2003 (5)
2001 (4)
2004 (1)
2000 (1)
1998 (1)

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S-bacillithiolation protects conserved and essential proteins against hypochlorite stress in firmicutes bacteria.

Not available

S-EPMC3584511 | biostudies-literature

Thermal Proteome Profiling Chlorotonil derivative in S. aureus USA300

The protein targets of Chlorotonil derivative ChB1-Epo2 were analysed by thermal proteome profiling in S. aureus USA300 cells.

ORGANISM(S): Staphylococcus aureus

2025-03-08 | PXD051670 | Pride

S-bacillithiolation protects against hypochlorite stress in Bacillus subtilis as revealed by transcriptomics and redox proteomics.

Not available

S-EPMC3226405 | biostudies-literature

PSXIV-30 Study of S. aureus strains, isolated from different biotopes of the cows’ organism.

Not available

S-EPMC6285829 | biostudies-literature

Protein S-mycothiolation functions as redox-switch and thiol protection mechanism in Corynebacterium glutamicum under hypochlorite stress.

Not available

S-EPMC3901351 | biostudies-literature

Correlation of structural elements and infectivity of the HET-s prion.

Not available

S-EPMC1567094 | biostudies-literature

Monitoring global protein thiol-oxidation and protein S-mycothiolation in Mycobacterium smegmatis under hypochlorite stress.

Not available

S-EPMC5430705 | biostudies-literature

Comparative analysis of the adaptation of Staphylococcus aureus to internalization by different types of human non-professional phagocytic host cells (NMR assay)

Staphylococcus aureus is a human pathogen that can cause a wide range of diseases. Although formerly regarded as extracellular pathogen, it has been shown that S. aureus can also be internalized by host cells and persist within these cells. In the present study, we comparatively analyzed survival an...

2015-07-01 | MTBLS102 | MetaboLights

Structural and Mechanistic Insights into C-S Bond Formation in Gliotoxin.

Not available

S-EPMC8251611 | biostudies-literature

Localized and Collective Motions in HET-s(218-289) Fibrils from Combined NMR Relaxation and MD Simulation.

Not available

S-EPMC6618077 | biostudies-literature

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