Faba - OmicsDI

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Genomics (151)
Proteomics (22)
Transcriptomics (18)
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Organisms

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Organisms

Vicia faba (39)
soil metagenome (5)
rhizosphere metagenome (3)
Vicia faba var. faba (2)
Pseudomonas viciae (2)
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root nodule metagenome (1)
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food metagenome (1)
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CHEBI ID

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Metabolite Name

1-Kestose (2)
2-Isopropylmalic acid (2)
Apigenin (2)
Pyruvic acid (2)
Citric acid (2)
Linoleic acid (2)
Xanthine (2)
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Hypoxanthine (2)
2-(2-oxo-1,3-dihydroindol-3-yl)acetic acid (1)
4-O-Methylphloracetophenone (1)
P-Anisaldehyde (1)
3-(2,4-dihydroxyphenyl)-7-hydroxy-5-methoxychromen-4-one (1)
3-[4,5-dihydroxy-2-methoxy-3-(3-methylbut-2-en-1-yl)phenyl]-1-(3,4-dihydroxyphenyl)propan-1-one (1)
6-{4-[12-(3,4-dihydroxyphenyl)-8,13-dihydroxy-4-oxo-3,11-dioxatricyclo[8.4.0.0虏,鈦穄tetradeca-1(10),2(7),8-trien-6-yl]-2-hydroxyphenoxy}-3,4,5-trihydroxyoxane-2-carboxylic acid (1)
6-{[2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-4-oxo-8-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]-4H-chromen-6-yl]oxy}-3,4,5-trihydroxyoxane-2-carboxylic acid (1)
6-{2-[3-(3,4-dihydroxyphenyl)propanoyl]-3,5-dihydroxy-6-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]phenoxy}-3,4,5-trihydroxyoxane-2-carboxylic acid (1)
[5-(3-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-5,7-dihydroxy-4-oxo-3,4-dihydro-2H-1-benzopyran-2-yl)-2-hydroxyphenyl]oxidanesulfonic acid (1)
6-[2,3-dihydroxy-5-({[3-hydroxy-6-(hydroxymethyl)-2,5-bis(3,4,5-trihydroxybenzoyloxy)oxan-4-yl]oxy}carbonyl)phenoxy]-3,4,5-trihydroxyoxane-2-carboxylic acid (1)
3,4,5-trihydroxy-6-{2-[8-(hydroxymethyl)-8-methyl-2-oxo-2H,8H-pyrano[2,3-f]chromen-3-yl]-5-methoxyphenoxy}oxane-2-carboxylic acid (1)
Isovitexin 7,2''-Di-O-galactoside (1)
4-Ketonostoxanthin (1)
L-NMMA (1)
Trans, trans-3,5-Octadien-2-one (1)
1,6-Anhydro-beta-D-glucose (1)
DG180-182 (1)
Raffinose Pentahydrate (1)
Riboflavin-5-Mono Phosphate (1)
Gibberellin 1 (1)
GA1 (1)

IsPrivate

False (1)

Submitter Keywords

FROG (1)

First Public Date

2024 (24)
2025 (20)
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2013 (4)
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Classification

bacteria (3)

Modelling Approach

Constraint-based model (1)

Study type

Transcription profiling by array (15)
RNAi profiling by array (1)

Release Date

2022 (88)
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2024 (52)
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2000 (1)
1999 (1)

Lab affiliation

Applied Proteomics Laboratory, Department of Biology, Maynooth University, Ireland. (2)
1Department of Food Characterization, Quality and Safety, Institute of Food Science, Technology and Nutrition (ICTAN-CSIC), Madrid, Spain (1)
Applied Microbiology, Faculty of Biology and Biotechnology, Ruhr University Bochum, Bochum, Germany (1)
Biological Mass Spectrometry Lab,Department of Translational Medicine (DiMeT),Center for Translational Research on Autoimmune & Allergic Diseases - CAAD, University of Piemonte Orientale Corso Trieste 15/A, 28100, Novara, Italy (1)
Department of Animal and Aquaculture Sciences, Faculty of Biosciences, Norwegian University of Life Sciences, Arboretveien 6, Ås, Norway. (1)
Department of Crop Protection, Faculty of Bioscience Engineering, Ghent University, Coupure links 653, B-9000 Ghent,Belgium (1)
Department of Life Sciences, Walloon Agricultural Research Centre, Chaussée de Charleroi, P.B. 234, 5030 Gembloux, Belgium (1)
Institute for Plant Genetics Leibniz University Hannover Herrenhäuser Str. 2 30419 Hannover Germany (1)
Institute for Sustainable Plant Protection of the National Research Council of Italy, IPSP - CNR (1)
Institute of Molecular Infection Biology, University of Würzburg, Würzburg Helmholtz Institute for RNA-based Infection Research, Würzburg (1)
Institute of Molecular and Cell Biology, Agency for Science, Technology and Research, Singapore (1)
Leibniz University Hannover Institute of Plant Genetics (1)
Leibniz Universität Hannover Institute of Plant Genetics (1)
Leibniz Universität Hannover Institute of Plant Genetics Herrenhäuser Str. 2 30419 Hannover (1)
McDonald Professor of Palaeoproteomics, McDonald Institute for Archaeological Research, University of Cambridge, UK (1)
Proteomics facility, Central Science Laboratory, University of Tasmania (1)
Research Group for Food Allergy, National Food Institute, Technical University of Denmark (1)

Tags

pathogen (3)
pathogen:bacterium (3)
xref:PubMed:30063731 (1)
xref:PubMed:36890232 (1)
xref:PubMed:19854834 (1)
xref:PubMed:41257602 (1)

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Combined analysis of transcriptome and metabolome reveals the accumulation of related metabolites and gene regulation networks during faba bean seed development

Background: Faba bean seeds are nutrient-dense, serving as a vital plant-based protein source for food and vegetables. However, the metabolic accumulation and transcriptional regulatory networks during seed development remain poorly understood.

Results: Metabolomic analysis of two developme...

2025-09-02 | MTBLS12471 | MetaboLights

Identification of Cetobacterium somerae as a key contributor to muscle quality improvement through intestinal microbiota transplantation from faba bean-fed donors in Yellow River carp (Cyprinus carpio)

Background The gut microbiota plays a significant role in modulating the growth and function of host muscle, and microbiota transplantation experiments provide compelling evidence of its capacity to improve muscle quality. Feeding faba beans improves the muscle quality of Yellow River carp. ...

2025-10-13 | MTBLS13128 | MetaboLights

Vicia faba var. faba

Vicia faba var. faba Raw sequence reads

PRJNA1259150 | ENA

De novo genome assembly of faba bean (Vicia faba L.) leaf transcriptome provide novel insights into the drought stress tolerance mechanisms

Drought is a major limiting constraint to faba bean production worldwide, including Tunisia. However, molecular mechanisms underlying faba bean responses to drought stress are not well understood. In this context, transcriptome analysis by RNA-seq was performed to investigate drought-related genes a...

ORGANISM(S): Vicia faba

2025-03-31 | GSE292422 | GEO

Vicia faba

Vicia faba Genome sequencing

PRJNA1028820 | ENA

Vicia faba

Vicia faba Genome sequencing

PRJNA1025910 | ENA

Vicia faba

Vicia faba Transcriptome or Gene expression

PRJNA227061 | ENA

Vicia faba