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TranscriptomicsA systems approach to delineate functions of YAP family members
Duplication of genes encoding transcription factors plays an essential role in driving phenotypic variation. Because regulation can occur at multiple levels, it is often difficult to discern how each duplicated factor achieves its regulatory specificity. In these cases, a systems approach may distin...
ORGANISM(S): Saccharomyces cerevisiae 
2008-02-03 | E-GEOD-10146 | biostudies-arrayexpress
TranscriptomicsEarly specification of CD8+ T lymphocyte fates during adaptive immunity revealed by single-cell gene expression analyses
T lymphocytes responding to microbial infection give rise to effector cells that mediate acute host defense and memory cells that provide long-lived immunity, but the fundamental question of when and how these cells arise remains unresolved. Here we combine single-cell gene expression analyses with...
ORGANISM(S): Mus musculus 
2014-03-02 | E-GEOD-54321 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of THP-1 cells reveals nitric oxide activation of Erk regulates the stability and translation of mRNA transcripts containing CU-rich elements
Nitric oxide (NO) can stabilize mRNA by activating p38 mitogen-activated protein kinase (MAPK). Here, transcript stabilization by NO was investigated in human THP-1 cells using microarrays. After LPS pre-stimulation, cells were treated with actinomycin D and then exposed to NO without or with the p3...
ORGANISM(S): Homo sapiens 
2008-06-12 | E-GEOD-4228 | biostudies-arrayexpress
TranscriptomicsCharacterisation of the mouse megakaryocyte transcriptome
This study aims to identify all genes expressed in primary mouse megakaryocytes Keywords: Megakaryocyte, SAGE, transcriptome analysis Mouse megakaryocytes were grown in vitro from bone marrow progenitors. Mature, polyploid (approximately 95% 64n and 128n) differentiated megakaryocytes were used to ...
ORGANISM(S): Mus musculus 
2007-02-02 | E-GEOD-6940 | biostudies-arrayexpress
TranscriptomicsComprehensive analysis of Arabidopsis expression level polymorphisms with simple inheritance
Expression level polymorphisms (ELPs) often result in cis-acting expression quantitative trait loci (cis-eQTL), which are important QTL and association mapping tools and account significantly for phenotypic variability. Generally, it is assumed that such stably heritable ELP represent regulatory ele...
ORGANISM(S): Arabidopsis thaliana 
2010-05-16 | E-GEOD-13628 | biostudies-arrayexpress
TranscriptomicsState- and trait-specific gene expression in euthymia and mania
Gene expression profiles of bipolar disorder (BD) patients were assessed during both a manic and a euthymic phase and compared both intra-individually, and with the gene expression profiles of controls. 11 BD patients were assessed in their manic as well as in their euthymic phase. Comparison of gen...
ORGANISM(S): Homo sapiens 
2014-09-04 | E-GEOD-46416 | biostudies-arrayexpress
GenomicsNational Cancer Institute Genome-Wide Association Study of Renal Cell Carcinoma

The National Cancer Institute (NCI) genome-wide association study (GWAS) of renal cell carcinoma (RCC) was conducted to investigate common genetic variants associated with RCC risk. The GWAS includes 1,453 RCC cases and 3,531 controls of European background from 4 studies (3 cohort, 1 case-con...

phs000351.v1.p1 | EGA
UnknownRisk profiles and one-year outcomes of patients with newly diagnosed atrial fibrillation in India: Insights from the GARFIELD-AF Registry.
Not available
S-EPMC6306365 | biostudies-literature
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