Fan H H - OmicsDI

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Unknown (15345)
Proteomics (414)
Transcriptomics (258)
Metabolomics (158)
Genomics (58)
Multiomics (5)
Models (2)
Other (1)

Organisms

Homo sapiens (200)
Mus musculus (98)
Arabidopsis thaliana (17)
Rattus norvegicus (14)
Zea mays (6)
Saccharomyces cerevisiae (5)
Bacillus amyloliquefaciens (4)
Drosophila melanogaster (4)
Oryza sativa (3)
Oryza sativa Japonica Group (3)
Helicobacter pylori 26695 (2)
Macaca mulatta (2)
Brassica napus (2)
Vitis vinifera (2)
Sus scrofa (2)
Larimichthys crocea (1)
Pinus massoniana (1)
Monopterus albus (1)
Rhodococcus opacus (1)
Papilio xuthus (1)
Tomato yellow leaf curl China virus (1)
Saccharomyces pastorianus Weihenstephan 34/70 (1)
Oryza longistaminata (1)
Populus nigra (1)
Mytilus edulis (1)
Bombyx mori (1)
Erwinia amylovora (1)
Mus musculus x Mus spretus (1)
Malus domestica (1)
Citrus sinensis (1)

Organisms

Mus musculus (7)
Protula sp. h YS-2021 (4)
Danio rerio (4)
Agrobacterium fabrum str. C58 (1)
Pimephales promelas (1)
food metagenome (1)
Homo sapiens (1)

Repository

biostudies-arrayexpress (273)
pride (248)
MetaboLights (109)
iProX (108)
MassIVE (51)
GNPS (49)
EGA (22)
ENA (21)
PeptideAtlas (5)
BioModels (2)
jPOST (2)
geo (1)
PanoramaPublic (1)

Tissue

Cell culture (71)
Permanent cell line cell (18)
Epithelial cell (14)
Liver (14)
Brain (11)
Kidney (9)
Cell suspension culture (8)
Leaf (8)
Hepatocyte (8)
Macrophage (7)
Whole body (7)
Heart (6)
HeLa cell (6)
Fibroblast (6)
Skin (5)
Lung (5)
T cell (5)
Blood (5)
Plant cell (4)
Spleen (4)
Others (3)
Embryonic stem cell (3)
Bone marrow (3)
Blood plasma (3)
Root (3)
Testis (3)
B cell (3)
Blood cell (3)
Colon (3)
Eye (2)

Disease

Carcinoma (5)
Disease free (5)
Acute leukemia (5)
Hepatocellular carcinoma (4)
Cardiovascular system disease (3)
Influenza (3)
Liver cancer (3)
Colon cancer (3)
Severe acute respiratory syndrome (2)
Brain glioblastoma multiforme (2)
Parkinson's disease (2)
Primary effusion lymphoma (PEL) (1)
LPS-induced acute lung injury (1)
SS2-infected (1)
Normal (1)
Endometrial Endometrioid Adenocarcinoma (1)
Small intestine neuroendocrine neoplasm (1)
Colonic disease (1)
Glaucoma (1)
Herpes simplex (1)
Non-alcoholic steatohepatitis (1)
Psoriasis (1)
Age related macular degeneration (1)
Retinopathy of prematurity (1)
Avian influenza (1)
Bone cancer (1)
Endometriosis (1)
Primary immunodeficiency disease (1)
Ovarian carcinoma (1)
Cell type cancer (1)

Technology Type

Mass Spectrometry (248)
Shotgun proteomics (130)
Mass spectrometry (83)
Bottom-up proteomics (36)
Data-dependent acquisition (28)
Chemical cross-linking coupled with mass spectrometry proteomics (24)
Affinity purification coupled with mass spectrometry proteomics (20)
Gel-based experiment (19)
NMR spectroscopy (18)
Mass spectrometry assay (9)
SWATH MS (9)
Data-independent acquisition (7)
Proteogenomics (4)
SRM/MRM (4)
Top-down proteomics (4)
Mass spectrometry imaging (2)
Immunopeptidomics (2)
HDMSE (2)
Illumina OmniQuad 2.5 - CNVpartition (1)
AB SOLiD System 3.0 (1)
All-ion fragmentation (1)
DiaPASEF (1)

Instrument Platform

LTQ Orbitrap Velos (48)
GC-MS (21)
GC MS (12)
LTQ Orbitrap (6)
Illumina HiSeq 2000 (4)
LTQ Orbitrap Elite (4)
Illumina HiSeq 2500 (3)
NextSeq 500 (3)
ScanArray Express HT (2)
Illumina MiSeq (2)
Illumina NovaSeq 6000 (2)
Agilent 7890A GC with 5975C inert XL MSD (2)
Q Exactive (2)
Agilent Bioanalyzer 2100 (1)
Agilent Microarray Scanner (1)
ScanArray Express HT [PerkinElmer] (1)
Affymetrix Fluidics Station 400 (1)
Illumina NovaSeq X (1)
NextSeq 2000 (1)
Illumina NextSeq 500 (1)
6110 Quadrupole LC/MS (1)
LTQ Orbitrap Velos Pro (1)
6530A Q-TOF LC/MS (1)
Agilent GC-MS (1)
Bruker maXis ESI Quadrupole TOF (1)
Agilent GC/MSD 5975C (1)
6550 iFunnel Q-TOF LC/MS (1)
Exactive (1)
LTQ Velos (1)
Q Exactive Plus (1)

Publication Date

2016 (68)
2025 (65)
2022 (64)
2023 (58)
2026 (58)
2015 (57)
2021 (56)
2014 (52)
2024 (50)
2019 (37)
2020 (33)
2013 (33)
2012 (31)
2017 (28)
2018 (27)
2011 (25)
2010 (24)
2008 (12)
2007 (11)
2009 (9)
2006 (4)
2005 (2)

UNIPROT ID/AC

Q99619 (3)
Q6ZVE7 (3)
Q8N4U5 (3)
Q9UBZ4 (3)
Q96QP1 (3)
Q9Y576 (3)
Q6ZTQ3 (3)
Q9H633 (3)
Q96PC5-2 (3)
Q96PC5 (3)
Q8TDW5 (3)
Q9NXZ2 (3)
Q8IZP6 (3)
Q9UHA2 (3)
Q9C019 (3)
Q96EP1 (3)
Q8IYM2 (3)
Q86SJ2 (3)
Q6MZQ0 (3)
Q9Y2C3 (3)
O00338 (3)
Q02833 (3)
O43194 (3)
Q9BZD2 (3)
Q8WUA8 (3)
Q8NC06 (3)
Q8N1W1 (3)
Q6NSJ2 (3)
Q8WYP3 (3)
Q3MII6 (3)

ENSEMBL ID

ENSG00000147251 (3)
ENSG00000247315 (3)
ENSG00000170477 (3)

CHEBI ID

CHEBI:30769 (38)
CHEBI:15741 (37)
CHEBI:15354 (36)
CHEBI:15891 (34)
CHEBI:15428 (32)
CHEBI:16335 (31)
CHEBI:16919 (31)
CHEBI:16704 (30)
CHEBI:16737 (30)
CHEBI:28044 (30)
CHEBI:7916 (29)
CHEBI:17596 (29)
CHEBI:17750 (27)
CHEBI:27897 (27)
CHEBI:17295 (25)
CHEBI:6650 (25)
CHEBI:27266 (25)
CHEBI:17368 (25)
CHEBI:26271 (25)
CHEBI:32816 (24)
CHEBI:16449 (24)
CHEBI:25017 (24)
CHEBI:18186 (24)
CHEBI:16196 (23)
CHEBI:17895 (23)
CHEBI:15971 (23)
CHEBI:17268 (23)
CHEBI:15756 (23)
CHEBI:17568 (23)
CHEBI:30915 (23)

Metabolite Name

Choline (26)
L-Histidine (23)
Taurine (23)
L-Phenylalanine (22)
Creatinine (20)
Creatine (20)
L-Glutamine (20)
Betaine (18)
Glycine (17)
L-Valine (17)
L-Leucine (17)
L-Isoleucine (17)
Hypoxanthine (16)
L-Arginine (16)
L-Methionine (16)
L-Threonine (16)
Uridine (16)
Adenosine (15)
L-Carnitine (15)
L-Lysine (15)
L-Alanine (15)
Inosine (15)
L-Tyrosine (14)
Cytosine (14)
D-Glucose (14)
L-Proline (14)
L-Asparagine (14)
Valine (13)
Citric acid (13)
Glutathione (13)

First Public Date

2017 (6)
2025 (4)
2023 (4)
2024 (2)
2020 (2)
2026 (1)
2018 (1)
2015 (1)

Modelling Approach

Ordinary differential equation model (2)

Lab affiliation

Centre for Cancer Cell & Molecular Biology, Barts Cancer Institute, Queen Mary University of London, Charterhouse Square, London EC1M 6BQ, UK. (5)
College of Chemistry and Molecular Engineering, Peking University, Beijing, China. (4)
Sun Yat-sen University (4)
Leibniz-Forschungsinstitut für Molekulare Pharmakologie (3)
School of Food and Biological Engineering, Hefei University of Technology, Hefei, 230009, China (3)
Department of Structural Biology, Leibniz-Forschungsinstitut für Molekulare Pharmakologie (FMP) (2)
Department of Physiology & Biophysics, University of California, Irvine, Irvine, California, USA (2)
School of Optometry, The Hong Kong Polytechnic University (2)
College of Animal Sciences and Technology, Huazhong Agricultural University, China (2)
Beijing National Laboratory for Molecular Sciences, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China. (2)
Center for Stem Cell Biology and Tissue Engineering, Key Laboratory for Stem Cells and Tissue Engineering, Ministry of Education, Sun Yat-sen University, Guangzhou, Guangdong, China. (2)
Hangzhou Normal University (2)
Leibniz-Forschungsinstitut für Molekulare Pharmakologie (FMP) (2)
Key Laboratory of Zoonosis of Liaoning Province, College of Animal Science & Veterinary Medicine, Shenyang Agricultural University, Shenyang, P.R. China (2)
Zhejiang University (2)
St Jude Children's Research Hospital (2)
Peking University (2)
Advanced Water Managment Center, The University of Queensland (1)
Department of Pathology, Brigham & Women's Hospital, Harvard Medical School, Boston, MA 02115, USA (1)
Department of Gynecological Oncology, Tongji Hospital, Tongji Medical College,Huazhong University of Science and Technology (1)
Precision Research Center for Refractory Diseases, Shanghai General Hospital,Shanghai Jiao Tong University School of Medicine (1)
Fruit and Tea Research Institute, Hubei Academy of Agricultural Sciences (1)
1.Department of Pharmaceutics, School of Pharmaceutical Sciences, Peking University, Beijing 100191, China 2.State Key Laboratory of Natural and Biomimetic Drugs, Beijing 100191, China Beijing Key Laboratory of Molecular Pharmaceutics and New Drug Delivery Systems, School of Pharmaceutical Sciences, Peking University, Beijing 100191, China (1)
1.Department of Pharmaceutics, School of Pharmaceutical Sciences, Peking University, Beijing 100191, China 2.State Key Laboratory of Natural and Biomimetic Drugs, Beijing 100191, China 3.Beijing Key Laboratory of Molecular Pharmaceutics and New Drug Delivery Systems, School of Pharmaceutical Sciences, Peking University, Beijing 100191, China (1)
Department of Biochemistry & Biophysics, Texas A&M University, College Station, Texas 77843 (1)
College of Pharmacy, Anhui University of Chinese Medicine, Hefei 230012, China. (1)
1Department of Pathology, Dana-Farber/Harvard Cancer Center, PhD Program in Immunology, Harvard Medical School; Department of Laboratory Medicine, Boston Children's Hospital, Enders Research Building, Room 811, Boston, MA, 02115, USA (1)
National Center for Protein Sciences (Beijing) (1)
Institute of Paulownia, Henan Agricultural University, Zhengzhou, Henan, 450002, P. R. China (1)
Department of Integration of Chinese and Western Medicine, School of Basic Medicine Science, Peking University, China (1)

IsPrivate

False (2)

Modification

15.994915 (1)
57.021464 (1)

Study type

Transcription profiling by array (171)
RNA-seq of coding RNA (46)
ChIP-seq (12)
RNA-seq of non coding RNA (8)
Unknown experiment type (7)
Comparative genomic hybridization by array (5)
Other (3)
Methylation profiling by high throughput sequencing (3)
Animal - High-throughput sequencing (2)
Transcription profiling by tiling array (2)
Genotyping by array (2)
Transcription profiling by RT-PCR (2)
Hi-C (2)
RNA-seq of total RNA (2)
Transcription profiling by SAGE (1)
ChIP-chip by tiling array (1)
ChIP-chip by array (1)
RIP-seq (1)
MicroRNA profiling by array (1)

Release Date

2025 (2390)
2022 (2098)
2023 (1927)
2024 (1867)
2021 (1596)
2020 (1221)
2019 (829)
2018 (686)
2017 (571)
2016 (460)
2015 (412)
2026 (372)
2014 (297)
2013 (214)
2012 (181)
2011 (117)
2010 (105)
2008 (95)
2009 (92)
2007 (31)
2006 (19)
2005 (11)
2004 (11)
2000 (4)
1999 (3)
2003 (2)
2002 (2)
2001 (2)
1998 (2)
1997 (1)

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wsProSpea

Protula sp. h YS-2021 (fan worm)

PRJEB59207 | ENA

wsProSpea1

Protula sp. h YS-2021 (fan worm) genome assembly, wsProSpea1

PRJEB60892 | ENA

wsProSpea1 alternate haplotype

Protula sp. h YS-2021 (fan worm) genome assembly, wsProSpea1, alternate haplotype

PRJEB60893 | ENA

wsProSpea

Protula sp. h YS-2021 (fan worm), genomic and transcriptomic data

PRJEB59206 | ENA

Deciphering the metabolic perturbation in hepatic alveolar echinococcosis: a 1H NMR-based metabolomics study

BACKGROUND: Hepatic alveolar echinococcosis (HAE) is caused by the growth of Echinococcus multilocularis larvae in the liver. It is a chronic and potentially lethal parasitic disease. Early stage diagnosis for this disease is currently not available due to its long asymptomatic ...

2021-08-03 | MTBLS981 | MetaboLights

Fan-out in gene regulatory networks.

Not available

S-EPMC3024275 | biostudies-literature

H. pylori 26695: wild-type vs nitro-oxide (NO) treated; knockout-crdS in H. pylori 26695 vs knockout-crdS with NO treatment

There are two transcription profiles. The first profiling is comparing control untreated H. pylori with H. pylori with NO treatment. And the second profiling is comparing knockout-crdS in H. pylori untreated with knockout-crdS with NO treatment. The goal was determine the effects of NO-responsive ge...

ORGANISM(S): Helicobacter pylori 26695

2015-06-13 | E-GEOD-69846 | biostudies-arrayexpress

Synthesis, structure and Hirshfeld surface analysis of 1,3-bis-[(1-octyl-1H-1,2,3-triazol-4-yl)meth-yl]-1H-benzo[d]imidazol-2(3H)-one.

Not available

S-EPMC10833399 | biostudies-literature

Rational Development of Remote C-H Functionalization of Biphenyl: Experimental and Computational Studies.

Not available

S-EPMC7064431 | biostudies-literature

Childhood trauma and cognitive deficits in patients with schizophrenia: mediation by orbitofrontal cortex H-shaped sulci volume.

Not available

S-EPMC9177195 | biostudies-literature