Fang Sun S - OmicsDI

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Unknown (2056)
Proteomics (73)
Transcriptomics (21)
Metabolomics (7)
Genomics (4)
Models (1)

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Homo sapiens (52)
Mus musculus (20)
Escherichia coli (4)
Drosophila melanogaster (3)
Arabidopsis thaliana (3)
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Saccharomyces cerevisiae (2)
Staphylococcus aureus (2)
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Heterocephalus glaber (1)
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Nicotiana tabacum (1)
Oryctolagus cuniculus (1)
Parabacteroides goldsteinii DSM 19448 = WAL 12034 (1)
Trichonephila (1)
Bos taurus (1)
Citrus maxima (1)
Escherichia coli str. K-12 substr. MG1655 (1)
Triticum aestivum (1)
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Repository

pride (44)
iProX (29)
biostudies-arrayexpress (24)
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Tissue

Blood plasma (6)
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Disease

Lung adenocarcinoma (2)
Acute leukemia (1)
Alzheimer's disease (1)
Cardiovascular system disease (1)
Colon cancer (1)
Gastric adenocarcinoma (1)
Lung cancer (1)
Prostate cancer (1)
Skin cancer (1)

Technology Type

Mass Spectrometry (44)
Top-down proteomics (13)
Bottom-up proteomics (11)
Shotgun proteomics (10)
Data-dependent acquisition (6)
Mass spectrometry (5)
Affinity purification coupled with mass spectrometry proteomics (4)
Mass spectrometry assay (2)
All-ion fragmentation (2)
DiaPASEF (2)
Gel-based experiment (2)
SWATH MS (2)
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Data-independent acquisition (1)
HDMSE (1)
Immunopeptidomics (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (4)
Liquid Chromatography MS - positive - reverse phase (4)
Illumina HiSeq 4000 (2)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - negative - reverse-phase (1)
Liquid Chromatography MS - positive - hilic (1)
Liquid Chromatography MS - positive - reverse-phase (1)

Publication Date

2024 (22)
2025 (21)
2026 (12)
2023 (9)
2013 (7)
2015 (6)
2022 (6)
2019 (4)
2021 (4)
2020 (3)
2016 (2)
2014 (2)
2012 (2)
2011 (2)
2018 (1)
2007 (1)
2006 (1)

CHEBI ID

CHEBI:15354 (4)
CHEBI:16335 (4)
CHEBI:16704 (4)
CHEBI:17154 (4)
CHEBI:17368 (4)
CHEBI:17509 (4)
CHEBI:17597 (4)
CHEBI:18183 (4)
CHEBI:7916 (4)
CHEBI:116314 (3)
CHEBI:132244 (3)
CHEBI:140761 (3)
CHEBI:15756 (3)
CHEBI:15971 (3)
CHEBI:16015 (3)
CHEBI:16027 (3)
CHEBI:16040 (3)
CHEBI:16235 (3)
CHEBI:16393 (3)
CHEBI:16610 (3)
CHEBI:16708 (3)
CHEBI:16709 (3)
CHEBI:16737 (3)
CHEBI:167825 (3)
CHEBI:16828 (3)
CHEBI:16919 (3)
CHEBI:16946 (3)
CHEBI:17053 (3)
CHEBI:17126 (3)
CHEBI:17295 (3)

Metabolite Name

Adenosine (3)
(+/-)12(13)-DiHOME (2)
1-methyladenosine (2)
2-hydroxycinnamic acid (2)
2-hydroxyphenylalanine (2)
4-anisic acid (2)
4-coumaric acid (2)
4-hydroxybenzaldehyde (2)
6-methylquinoline (2)
8-hydroxyquinoline (2)
Azelaic acid (2)
Citric acid (2)
Cortisone (2)
Creatinine (2)
Dibutyl phthalate (2)
Hypoxanthine (2)
Kynurenic acid (2)
Methyl jasmonate (2)
Palmitic acid (2)
Pantothenic acid (2)
Pyrrole-2-carboxylic acid (2)
Thymidine (2)
Uracil (2)
Uridine (2)
(+)-8'-hydroxyabscisic acid (1)
(+/-)-c75 (1)
(+/-)9-HpODE (1)
(-)-11-hydroxy-9,10-dihydrojasmonic acid 11-beta-d-glucoside (1)
(-)-camphor (1)
(-)-caryophyllene oxide (1)

IsPrivate

False (1)

Model Flag

Non Kinetic (1)

Modelling Approach

Constraint-based model (1)

Study type

Transcription profiling by array (13)
RNA-seq of coding RNA (6)
ChIP-seq (3)
RNAi profiling by array (1)
Genotyping by high throughput sequencing (1)

Release Date

2025 (313)
2022 (302)
2023 (261)
2024 (255)
2021 (227)
2020 (165)
2019 (116)
2018 (84)
2015 (63)
2017 (62)
2016 (58)
2026 (53)
2013 (33)
2014 (32)
2012 (21)
2011 (13)
2009 (7)
2010 (5)
2008 (3)
2007 (2)
2006 (2)
2005 (2)
2001 (1)

Lab affiliation

Michigan State University (3)
Department of Chemistry, Michigan State University, 578 S Shaw Lane, East Lansing, MI 48824, United States. (2)
westlake.edu.cn (2)
1Department of Chemistry, Michigan State University, 578 S Shaw Lane, East Lansing, Michigan 48824, USA (1)
1F, Bldg A, No.18 Science Park Road, Life Science Park, Changping District, Beijing 102206, P. R. China (1)
Barnett Institute of Chemical and Biological Analysis and Department of Chemistry & Chemical Biology, Northeastern University, Boston, MA, USA. (1)
College of Agriculture/Hubei Key Laboratory of Waterlogging Disaster and Agricultural Use of Wetland, Yangtze University, Jingzhou, Hubei 434025, China (1)
Department of Biochemistry, University of Oxford, Oxford, OX1 3QU, UK (1)
Department of Biochemistry, and Department of Cardiology of Second Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou 310058, China. (1)
Department of Cellular & Molecular Physiology Milton S. Hershey Medical Center Penn State College of Medicine Hershey, PA, USA (1)
Department of Chemistry Michigan State University (1)
Department of Chemistry, Michigan State University, 578 S Shaw Lane, East Lansing, MI 48824, USA (1)
Department of Chemistry, Michigan State University, 578 S Shaw Lane, East Lansing, MI 48824, United States (1)
Department of Chemistry, Michigan State University, 578 S Shaw Lane, East Lansing, Michigan 48824, USA (1)
Department of Chemistry, Michigan State University, 578 S Shaw Lane, East Lansing, Michigan 48824, United States (1)
Department of Chemistry, Michigan State University, 578 SShaw Lane, East Lansing, MI 48824, United States (1)
Department of Chemistry, Michigan State University, East Lansing, MI 48824 (1)
Department of Chemistry, Michigan State University, MI 48824, USA (1)
Department of Clinical Laboratory, Shenshan Central Hospital, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, Shanwei, China (1)
Department of Liver Surgery and Transplantation, Liver Cancer Institute, Zhongshan Hospital, Fudan University, and Key Laboratory of Carcinogenesis and Cancer Invasion, Ministry of Education (1)
Department of Molecular & Integrative Physiology,University of Michigan Medical School, 5325 Brehm Tower, 1000 Wall St., Ann Arbor, MI, 48105 (1)
Department of Pharmacology & Chemical Biology, University of Pittsburgh School of Medicine,UPMC Hillman Cancer Center, Pittsburgh, PA (1)
Department of Pharmacology, University of Virginia School of Medicine, Charlottesville, Virginia 22908, USA (1)
Drug Discovery Moffitt Cancer Center Tampa, FL, USA (1)
Institute of Computing Technology, CAS (1)
Key Laboratory of Horticultural Plant Biology (Ministry of Education), Huazhong Agricultural University , Wuhan 430070, China (1)
MOE Key Laboratory of Tumor Molecular Biology and Key Laboratory of Functional Protein Research of Guangdong Higher Education Institutes, Institute of Life and Health Engineering, College of Life Science and Technology, Jinan University, Guangzhou, China (1)
MOE Key Laboratory of Tumor Molecular Biology and Key Laboratory of Functional Protein Research of Guangdong Higher Education Institutes, Institute of Life and Health Engineering, Jinan University, Guangzhou 510632, China (1)
MOE Key Laboratory of Tumor Molecular Biology and Key Laboratory of Functional Protein Research of Guangdong Higher Education Institutes, Institute of Life and Health Engineering, Jinan University, Guangzhou, China (1)
Medical School of Nanjing University (1)

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Evolution and Functional Divergence of SUN Genes in Plants.

Not available

S-EPMC7982736 | biostudies-literature

Fang2011 - Genome-scale metabolic network of Burkholderia cenocepacia (iKF1028)

Fang2011 - Genome-scale metabolic network of Burkholderia cenocepacia (iKF1028) This model is described in the article: Exploring the metabolic network of the epidemic pathogen Burkholderia cenocepacia J2315 via genome-scale reconstruction. Fang K, Zhao H, Sun C, Lam CM, Chang...

2015-07-30 | MODEL1507180051 | BioModels

Risk factors associated with pregnancy outcomes in patients with recurrent pregnancy loss after treatment.

Not available

S-EPMC11660650 | biostudies-literature

A pilot study for deciphering post-translational modifications and proteoforms of tau protein by capillary electrophoresis-mass spectrometry

Abnormal accumulation of tau proteins is one pathological hallmark of Alzheimer’s disease (AD). Many tau protein post-translational modifications (PTMs) are associated with the development of AD, such as phosphorylation, acetylation, and methylation. Therefore, a complete picture of PTM landscape of...

ORGANISM(S): Escherichia coli

2024-10-15 | PXD053367 | Pride

Prognostic factors and the necessity of chemotherapy for stage II gastric cancer: a model based on multicenter retrospective study.

Not available

S-EPMC10167061 | biostudies-literature

Huayu Jiedu Fang Protects Ovarian Function in Mouse with Endometriosis Iron Overload by Inhibiting Ferroptosis.

Not available

S-EPMC9448539 | biostudies-literature

Modulation of the Gut Microbiota by Shen-Yan-Fang-Shuai Formula Improves Obesity Induced by High-Fat Diets.

Not available

S-EPMC7779482 | biostudies-literature

Metabolomic analysis of anti-hypoxia and anti-anxiety effects of Fu Fang Jin Jing Oral Liquid.

Not available

S-EPMC3799728 | biostudies-literature

Zhuang-Gu-Fang intervenes vasculogenic and osteogenic coupling in GK rats through Notch1/Noggin/VEGF pathway.

Not available

S-EPMC10958413 | biostudies-literature

A simple and efficient approach for preparing cationic coating with tunable electroosmotic flow for capillary zone electrophoresis-mass spectrometry-based top-down proteomics

Capillary zone electrophoresis-tandem mass spectrometry (CZE-MS/MS) has become a valuable analytical technique in top-down proteomics (TDP) in recent years. CZE-MS/MS-based TDP typically employs separation capillaries with neutral coatings (i.e., linear polyacrylamide, LPA). However, issues related ...

ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast)

2024-10-15 | PXD051862 | Pride

Top-down proteomics proteoform capillary zone electrophoresis-mass spectrometry covalent cationic coating reproducibility large proteoforms

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