Fang Y Y - OmicsDI

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Unknown (16883)
Proteomics (352)
Transcriptomics (150)
Genomics (126)
Metabolomics (31)

Organisms

Homo sapiens (140)
Mus musculus (72)
Danio rerio (7)
Mustela putorius furo (6)
Apis mellifera (6)
Glycine max (5)
Rattus norvegicus (4)
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 (3)
Gossypium hirsutum (2)
Macaca mulatta (2)
Ovis aries (2)
Spalax carmeli (1)
Nannospalax galili (1)
Salmonella (1)
Fukomys damarensis (1)
Camellia sinensis (1)
Myotis brandtii (1)
Sterkiella histriomuscorum (1)
Pteropus alecto (1)
Oxytricha trifallax (1)
Prunus armeniaca (1)
Brassica oleracea (1)
unidentified microorganism (1)
Metarhizium acridum (1)
Camponotus floridanus (1)
Harpegnathos saltator (1)
Citrus trifoliata (1)
Metarhizium anisopliae (1)
Citrus reticulata (1)
Trichoderma reesei (1)

Organisms

Mus musculus (2)
Homo sapiens (1)

Repository

iProX (167)
pride (166)
biostudies-arrayexpress (154)
NODE (114)
MetaboLights (31)
MassIVE (12)
PeptideAtlas (4)
EGA (3)
geo (3)
jPOST (3)
ENA (3)

Tissue

Cell culture (34)
Liver (17)
Lymphoma (11)
Lung (10)
Whole body (10)
Brain (8)
Blood serum (6)
Blood plasma (5)
Heart (5)
Epithelial cell (4)
Root (4)
Stem cell (4)
Blood cell (3)
Embryo (3)
Lung epithelium (3)
Type II pneumocyte (3)
B cell (2)
Blood (2)
Bone marrow (2)
Flight muscle (2)
Gastric adenocarcinoma cell (2)
Leaf (2)
Mammary gland epithelial cell (2)
Ovary (2)
Permanent cell line cell (2)
Secretion (2)
Seedling (2)
White adipocyte (2)
A549-CR cell (1)
HCT-116 cell (1)

Disease

Lymphoma (11)
Lung cancer (6)
Disease free (3)
Lung adenocarcinoma (3)
Acute leukemia (2)
Breast cancer (2)
Hepatocellular carcinoma (2)
Melanoma (2)
Non-small cell lung carcinoma (2)
B-cell lymphoma (1)
Cardiovascular system disease (1)
Cervix carcinoma (1)
Chikungunya (1)
Chronic bronchitis (1)
Cystic fibrosis (1)
Gastric adenocarcinoma (1)
IgA glomerulonephritis (1)
Infertility (1)
Liver disease (1)
Lung squamous cell carcinoma (1)
Lupus nephritis (1)
Pancreas adenocarcinoma (1)
Renal cell carcinoma (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (166)
Shotgun proteomics (100)
Mass spectrometry (25)
Affinity purification coupled with mass spectrometry proteomics (23)
Bottom-up proteomics (17)
Data-dependent acquisition (8)
Gel-based experiment (8)
Top-down proteomics (8)
Mass spectrometry assay (5)
Data-independent acquisition (5)
Chemical cross-linking coupled with mass spectrometry proteomics (4)
SWATH MS (3)
Affinity proteomics (2)
Illumina HiSeq 2000 (1)
NMR spectroscopy (1)
All-ion fragmentation (1)
DiaPASEF (1)
MSE (1)
SRM/MRM (1)
SomaScan affinity proteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (9)
Liquid Chromatography MS - negative - reverse phase (9)
Q Exactive (4)
Liquid Chromatography MS - positive - hilic (4)
Illumina HiSeq 2000 (3)
LTQ Orbitrap Velos (3)
Liquid Chromatography MS - negative - hilic (3)
Illumina HiSeq 4000 (2)
Liquid Chromatography MS - Negative (LC-MS (Neg)) (2)
Liquid Chromatography MS - Positive (LC-MS (Pos)) (2)
Liquid Chromatography MS - negative (2)
Liquid Chromatography MS - positive (2)
Liquid Chromatography MS - negative - reverse-phase (2)
GenePix 4000A [Axon Instruments] (1)
Illumina NovaSeq 6000 (1)
NextSeq 500 (1)
Orbitrap Elite mass spectrometer(Thermo) (1)
Orbitrap Exploris 480 (1)
Orbitrap Fusion (1)
Orbitrap Fusion Lumos (1)
Q Exactive HF (1)
Q Exactive HF-X (1)
MALDI MS (Imaging MS) (1)
LMJ-SSP/ESI MS (Imaging MS) (1)
Liquid Chromatography MS - negative – rp (1)
Liquid Chromatography MS - positive – rp (1)
Wates I-Class/XEVO-G2 XS QTOF (1)
Direct infusion MS - negative (1)
Liquid Chromatography MS - Alternating (LC-MS (Alternating)) (1)
Gas Chromatography MS - Positive (GC-MS (Positive)) (1)

Publication Date

2022 (50)
2025 (44)
2024 (37)
2023 (37)
2014 (31)
2013 (30)
2021 (28)
2020 (25)
2010 (24)
2026 (23)
2017 (21)
2019 (19)
2015 (19)
2012 (19)
2011 (19)
2018 (17)
2016 (13)
2009 (3)
2008 (2)
2007 (2)
2006 (2)
2005 (2)
2004 (1)

UNIPROT ID/AC

A3QM98 (4)
A3QMC5 (4)
B1PEX6 (4)
B1Q273 (4)
B6EU49 (4)
C7FZU5 (4)
D0IMZ5 (4)
D3YT36 (4)
E1B6Q7 (4)
G1K0V8 (4)
G4S034 (4)
G4XR16 (4)
G5EBF3 (4)
G5EBJ7 (4)
G5EBJ8 (4)
G5EBK3 (4)
G5EBR1 (4)
G5EBW5 (4)
G5EC10 (4)
G5EC31 (4)
G5EC98 (4)
G5ECM9 (4)
G5ECR0 (4)
G5ECU1 (4)
G5ECU5 (4)
G5ECV9 (4)
G5ED01 (4)
G5ED07 (4)
G5ED31 (4)
G5ED41 (4)

CHEBI ID

CHEBI:7916 (10)
CHEBI:16335 (9)
CHEBI:16704 (9)
CHEBI:16919 (9)
CHEBI:15354 (9)
CHEBI:30769 (9)
CHEBI:16708 (8)
CHEBI:17154 (8)
CHEBI:18183 (8)
CHEBI:27897 (8)
CHEBI:15756 (8)
CHEBI:17368 (8)
CHEBI:25094 (7)
CHEBI:17562 (7)
CHEBI:16566 (7)
CHEBI:16196 (7)
CHEBI:16393 (7)
CHEBI:17509 (7)
CHEBI:16359 (7)
CHEBI:15971 (7)
CHEBI:16737 (7)
CHEBI:17895 (7)
CHEBI:17295 (7)
CHEBI:17351 (7)
CHEBI:17992 (6)
CHEBI:46961 (6)
CHEBI:16755 (6)
CHEBI:17822 (6)
CHEBI:26271 (6)
CHEBI:16856 (6)

Metabolite Name

Ursodeoxycholic acid (5)
Deoxycholic acid (5)
Dibutyl phthalate (5)
Uridine (5)
Chenodeoxycholic acid (4)
Kynurenic acid (4)
Ornithine (4)
Choline (4)
Taurocholic acid (4)
Citric acid (4)
Palmitic acid (4)
Adenine (4)
Creatinine (4)
Hyocholic acid (3)
Taurochenodeoxycholic acid (3)
Pyruvic acid (3)
Pyrrole-2-carboxylic acid (3)
Glycodeoxycholic acid (3)
Ursocholic acid (3)
Ketoleucine (3)
7-Ketodeoxycholic acid (3)
Proline (3)
Valine (3)
Uracil (3)
Betaine (3)
Genistein (3)
Propionylcarnitine (3)
Pyroglutamic acid (3)
Lithocholic acid (3)
Glycochenodeoxycholic acid (3)

First Public Date

2014 (2)
2022 (1)

Modification

4-tetrahydrothiazine-3-carboxylic acid (1)

Study type

Transcription profiling by array (68)
RNA-seq of coding RNA (47)
RNA-seq of non coding RNA (14)
ChIP-seq (6)
Unknown experiment type (5)
ChIP-chip by tiling array (2)
Other (2)
Methylation profiling by high throughput sequencing (2)
Transcription profiling by MPSS (1)
Transcription profiling by tiling array (1)
RNAi profiling by array (1)
Methylation profiling by array (1)
Genotyping by high throughput sequencing (1)
RNA-seq of coding RNA from single cells (1)
RNA-seq of total RNA (1)

Release Date

2025 (2773)
2022 (2466)
2023 (2145)
2024 (2020)
2021 (1861)
2020 (1245)
2019 (921)
2018 (729)
2017 (619)
2016 (517)
2015 (416)
2026 (369)
2014 (290)
2013 (207)
2012 (145)
2011 (97)
2010 (76)
2009 (45)
2008 (23)
2007 (19)
2005 (19)
2004 (14)
2006 (13)
1999 (3)
2001 (2)
2002 (1)
2000 (1)
1997 (1)

Lab affiliation

Institutes of Biomedical Sciences and department of Chemistry, Fudan University, Shanghai, China (6)
Moffitt Cancer Center Tampa, FL, USA (6)
Dalian Institute of Chemical Physics, CAS (2)
Department of Endocrinology, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, China. (2)
Department of Stomatology, Nanfang Hospital, Southern Medical University, Guangzhou, China, 510515 (2)
Drug Discovery Moffitt Cancer Center Tampa, FL, USA (2)
Institute of Apicultural Research, Chinese Academy of Agricultural Sciences (2)
Institute of Hydrobiology, Chinese Academy of Sciences (2)
Jiangsu Key Laboratory of Crop Genetics and Physiology/Co-Innovation Center for Modern Production Technology of Grain Crops, Key Laboratory of Plant Functional Genomics of the Ministry of Education, Yangzhou University, Yangzhou 225009, China (2)
Moffitt Cancer Center (2)
National Center for Advancing Translational Sciences, National Institutes of Health (2)
Peking Union Medical College (2)
SIMM (2)
westlake.edu.cn (2)
1F, Bldg A, No.18 Science Park Road, Life Science Park, Changping District, Beijing 102206, P. R. China (1)
Affiliated Hospital of Nanjing University of Chinese Medicine (1)
Anhui Agricultural University,China (1)
BGI-Shenzhen,China (1)
BSRC, University of St Andrews, UK (1)
Biomedical Sciences Research Complex, University of St Andrews (1)
Cancer Research Center, School of Medicine, Xiamen University (1)
Carnegie Mass Spectrometry Facility (1)
Center for Cancer Research, Massachusetts General Hospital, Boston MA, USA;Department of Chemistry and Chemical Biology, Harvard University, Cambridge MA, USA. (1)
Center of High-throughput Biology, Dept. of Biochemistry and Molecular Biology, UBC (1)
Chair in Infection and Global Health, Department of Infection Biology, Institute of Infection and Global Health, University of Liverpool, (1)
Children's Hospital of Soochow University, Suzhou (1)
China National GenBank,BGI-Shenzhen,Shenzhen 518120,China (1)
Chinese Academy of Agricultural Science (1)
Chinese Academy of Agricultural Sciences, Institute of Apiscultural Research (1)
Chinese Academy of Sciences Shanghai Institute of Materia Medica (1)

Tags

xref:PubMed:15671270 (1)
xref:PubMed:17913887 (1)

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Polyvinylpyrrolidone can effectively improve the efficiency of resiquimod in sorting bovine Y sperm.

Not available

S-EPMC12415464 | biostudies-literature

Responses of Physiology, Photosynthesis, and Related Genes to Saline Stress in Cornus hongkongensis subsp. tonkinensis (W. P. Fang) Q. Y. Xiang.

Not available

S-EPMC9002922 | biostudies-literature

Estimating an EQ-5D-Y-3L Value Set for China.

Not available

S-EPMC9758244 | biostudies-literature

Forensic characteristics and genetic affinity analyses of Xinjiang Mongolian group using a novel six fluorescent dye-labeled typing system including 41 Y-STRs and 3 Y-InDels.

Not available

S-EPMC7005640 | biostudies-literature

Deep Sequencing of Fosmid Clones Indicates Gene Conversion in the Male-Specific Region of the Giant Panda Y Chromosome.

Not available

S-EPMC6125247 | biostudies-literature

Y-Stent Rescue Technique for Failed Thrombectomy in Patients With Large Vessel Occlusion: A Case Series and Pooled Analysis.

Not available

S-EPMC7481477 | biostudies-literature

Alterations in the gene expression profile in SKOV3 cells exposed to elaiophylin

Elaiophylin was screened and identified as a novel autophagy inhibitor, with significant antitumor efficacy as a single agent. To explore the mechanisms by which elaiophylin kills cancer cells, NimbleGen 12x135K microarrays were used to find the gene expression changes in SKOV3 cells treated with el...

ORGANISM(S): Homo sapiens

2022-06-07 | GSE205529 | GEO

The Conserved Transcriptional Activation Activity Identified in Dual-Specificity Tyrosine-(Y)-Phosphorylation-Regulated Kinase 1.

Not available

S-EPMC9953678 | biostudies-literature

The NF-Y-PYR module integrates the abscisic acid signal pathway to regulate plant stress tolerance.

Not available

S-EPMC8633499 | biostudies-literature