Fasciola - OmicsDI

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Unknown (506)
Genomics (101)
Proteomics (30)
Transcriptomics (11)
Methylation profiling (3)
Metabolomics (1)

Organisms

Chlamydomonas reinhardtii (25)
Pseudomonas canadensis (25)
Human alphaherpesvirus 1 strain 17 (25)
Marchantia polymorpha subsp. ruderalis (25)
Methylocystis sp. (25)
Exiguobacterium sp. SH31 (25)
Porites pukoensis (25)
Porphyromonas gingivalis W83 (25)
Bothrops insularis (25)
Bothrops jararaca (25)
Bothrops jararacussu (25)
Bothrops cotiara (25)
Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 (25)
Dinosauria (25)
Pseudomonas [fluorescens] SBW25 (25)
Trypanosoma vivax Y486 (25)
Streptomyces coelicolor (25)
Aves (25)
Pseudomonas taiwanensis (25)
Burkholderia ubonensis MSMB22 (25)
Pseudomonas aeruginosa PA103 (25)
Artibeus jamaicensis (25)
Mus musculus (6)
Fasciola hepatica (4)
Bubalus bubalis (4)
Homo sapiens (3)
Ovis aries (2)
Bos taurus (2)
Fasciola gigantica (2)
Oryctolagus cuniculus (1)

Organisms

Fasciola hepatica (14)
Fasciola gigantica (13)
Bubalus bubalis (5)
Ovis aries (5)
Mus musculus (5)
Bos taurus (2)
Homo sapiens (2)
Fasciolopsis buskii (1)
Artyfechinostomum sufrartyfex (1)
Paragonimus westermani (1)
Microphallus sp. 'livelyi' (1)
Neorickettsia sp. 179522 (1)

Repository

ENA (96)
pride (25)
geo (16)
iProX (4)
biostudies-arrayexpress (2)
EGA (1)
MassIVE (1)
MetaboLights (1)

Tissue

Egg (2)
Whole body (2)
Juvenile (1)
Protein secretion (1)
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Secretory cell (1)
Integument (1)
Hepatic stellate cell (1)
Mesothelial cell (1)
Intestinal epithelial cell (1)
Saliva (1)
Bone marrow (1)
Oocyte (1)
Blood serum (1)
Cell culture (1)
Epithelial cell (1)
Macrophage (1)

Disease

Fascioliasis (5)
Viral infectious disease (1)
Bacterial sepsis (1)
Disease free (1)

Technology Type

Mass Spectrometry (25)
Shotgun proteomics (11)
Gel-based experiment (7)
SWATH MS (4)
Bottom-up proteomics (2)
Affinity purification coupled with mass spectrometry proteomics (2)
Mass spectrometry (1)
DiaPASEF (1)
Data-dependent acquisition (1)
Data-independent acquisition (1)

Instrument Platform

Q Exactive HF-X (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)

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2015 (7)
2019 (7)
2024 (5)
2020 (3)
2018 (3)
2016 (3)
2026 (3)
2021 (3)
2025 (2)
2017 (1)

CHEBI ID

CHEBI:7101 (1)
CHEBI:4307 (1)
CHEBI:47954 (1)
CHEBI:17396 (1)
CHEBI:28804 (1)
CHEBI:42717 (1)
CHEBI:55501 (1)
CHEBI:17522 (1)
CHEBI:14648 (1)
CHEBI:16069 (1)
CHEBI:4593 (1)
CHEBI:12575 (1)
CHEBI:128477 (1)
CHEBI:144365 (1)
CHEBI:30821 (1)
CHEBI:40356 (1)
CHEBI:114444 (1)
CHEBI:63931 (1)
CHEBI:17436 (1)
CHEBI:63581 (1)
CHEBI:15925 (1)
CHEBI:18202 (1)
CHEBI:18403 (1)
CHEBI:86396 (1)
CHEBI:37051 (1)
CHEBI:16997 (1)
CHEBI:45744 (1)
CHEBI:28645 (1)
CHEBI:15895 (1)
CHEBI:17028 (1)

Metabolite Name

Monomethyl glutaric acid (1)
1-[(1R)-2-[(4-chlorophenyl)methyl]-1-(hydroxymethyl)-7-methoxy-1'-spiro[3,9-dihydro-1H-pyrido[3,4-b]indole-4,4'-piperidine]yl]-1-butanone (1)
L-erythro-biopterin (1)
Isoguanine (1)
Ubiquinone-2 (1)
3-hydroxy-2-methylbutanoic acid (1)
Hexanoic acid (1)
D-2-aminopentanoic acid (1)
Hydroxyacetone (1)
S-sulfo-L-cysteine (1)
N-methyl-6-pyridone-3-carboxamide (1)
N(2),N(2)-dimethylguanosine (1)
Quinaldic acid (1)
Dihydrolipoic acid (1)
Sphingomyelin d18:1 (1)
Valeric acid (1)
(R)-prunasin (1)
Imidazol-4-ylacetic acid (1)
D-serine (1)
3-Oxooctanoyl-[acp] (1)
Skatole (1)
N(5)-[(Z)-amino(hydroxyimino)methyl]ornithine (1)
Dihydroxyfumaric acid (1)
Daidzein 7-O-beta-D-glucoside (1)
1H-imidazole (1)
Sulfonyldimethane (1)
N(pros)-methyl-L-histidine (1)
(S)-carnitine (1)
3-aminobutanoic acid (1)
Sn-glycero-3-phosphoethanolamine (1)

First Public Date

2022 (11)
2023 (9)
2019 (9)
2024 (8)
2021 (7)
2018 (7)
2013 (7)
2026 (6)
2020 (6)
2015 (6)
2014 (6)
2025 (5)
2016 (5)
2017 (3)
2010 (1)

Classification

helminths (29)

Study type

Transcription profiling by array (2)

Release Date

2022 (58)
2025 (51)
2023 (45)
2021 (45)
2020 (44)
2024 (41)
2019 (41)
2017 (30)
2015 (29)
2016 (29)
2018 (28)
2014 (12)
2012 (11)
2013 (9)
2011 (8)
2008 (7)
2026 (5)
2010 (4)
2009 (4)
2007 (2)
2006 (1)
2004 (1)
2003 (1)
2000 (1)
1999 (1)

Lab affiliation

Laboratory of Parasitology, Institute of Natural Resources and Agrobiology of Salamanca (IRNASA-CSIC), C/Cordel de Merinas 40-52, 37008 Salamanca, Spain (2)
Centro de Biotecnologia, Universidade Federal do Rio Grande do Sul, Porto Alegre, RS, Brazil (1)
Central European Institute of Technology, Proteomics core facility, Masaryk University, 625 00 Brno, Czech Republic (1)
Laboratory of Helminth Parasites of Zoonotic Importance(ATENEA), Institute of Natural Resources and Agrobiology of Salamanca (IRNASA-CSIC), Spain (lab head) (1)
School of Biological Sciences Medical Biology Centre Queen's University Belfast Belfast, N. Ireland (1)
Veterinary Parasitology Group, Institute of Biological Environmental and Rural Sciences (IBERS), Aberystwyth University, Penglais, Aberystwyth, Ceredigion, SY23 3FL (1)
Professor in Infectious Diseases School of Biological Sciences Medical Biology Centre (MBC) Queen's University Belfast Belfast UK (1)
Department of Veterinary Pathobiology College of Veterinary Medicine Texas A & M University College Station Texas USA ( lab head ) (1)
Institute of Biological Environmental and Rural Sciences, Aberystwyth University, Wales UK (1)
School of Biological Sciences, Queen's University Belfast Institute for Global Food Security, Queen's University Belfast (1)
Head of School, Senior Lecturer, School of Biotechnology, Fundamental and Translational Immunology Group Leader Dublin City University, Dublin 9. Ireland (1)
Molecular Parasitology Lab (MPL),Orbsen Building, School of Natural Sciences/Ryan Institute National University of Ireland, Galway, Ireland (1)
Laboratory of Helminth Parasites of Zoonotic Importance(ATENEA), Institute of Natural Resources and Agrobiology of Salamanca (IRNASA-CSIC), Spain (1)
Departament de Bioquímica i Biologia Molecular, Facultat de Ciències Biològiques, Universitat de València, Burjassot (Valencia), Spain (1)
Centro de Biotecnologia Universidade Federal do Rio Grande do Sul (1)
Molecular Parasitology Lab - Centre for One Health and Ryan Institute, School of Natural Science, National University of Ireland Galway, Galway, Republic of Ireland. (1)
Institute of Biological, Environmental and Rural Sciences, Aberystwyth University, Aberystwyth SY23 3DA, United Kingdom (1)
College of Animal Science and Technology, Guangxi University, Nanning,China (1)
Institute of Parasitology, University of Zurich, Zurich, Switzerland (1)
Translational Proteomics Center, University of Puerto RIco, Medical Sciences Campus (1)
Department of Zoology, School of Natural Sciences, National University of Ireland, Galway. (1)
State Key Laboratory of Veterinary Etiological Biology, Key Laboratory of Veterinary Parasitology of Gansu Province, Lanzhou Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Lanzhou, Gansu Province 730046, PR China (1)
School of Biological Sciences Queens University Belfast 19 Chlorine Gardens Belfast UK BT9 5DL Queen’s University Belfast (1)
Departmento de Bioquíimica y Biologíia Molecular, Universitat de Valèencia, Burjassot, Valencia, Spain (1)

Tags

pathogen:helminth (29)
pathogen (29)

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Gene expression profile in the liver of BALB/c mice infected with Fasciola hepatica

Background: Fasciola hepatica infection still remains one of the helminthic neglected tropical diseases (NTDs). It has a huge worldwide distribution, affecting mainly cattle and, sometimes, human beings. In addition to data reported about the immunological response induced by helminthic infections a...

ORGANISM(S): Mus musculus

2015-06-05 | E-GEOD-69588 | biostudies-arrayexpress

Splenic gene expression profile of mice immunized with an anti-Fasciola hepatica vaccine candidate: insights into the immunological mechanisms leading to protection

Fasciolosis remains an important food-borne tremaode disease causing high morbidity around the world and affecting grazing animals and humans. A deeper understanding concerning the molecular mechanisms by which Fasciola hepatica infection occurs as well as the molecular basis involved in acquiring p...

ORGANISM(S): Mus musculus

2015-06-06 | E-GEOD-69611 | biostudies-arrayexpress

Fasciola gigantica

Fasciola gigantica Raw sequence reads

PRJNA350370 | ENA

Fasciola hepatica

Transcriptome of adult Fasciola hepatica

PRJNA328902 | ENA

Fasciola hepatica

Fasciola hepatica (liver fluke) Transcriptome Assembly

PRJNA330752 | ENA

Fasciola gigantica