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Proteomics,MultiomicsFeng_P120_VS1_BRPF3_HBO1_complex
This submission contains the mass spectrometry files for the manuscript by Feng et al. that describes the characterization of a protein complex containing BRPF3 and HBO1 in the regulation of DNA replication origins. This submission contains 3 IDA files for the following baits: empty 3XFLAG control, ...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2014-11-19 | MSV000078943 | MassIVE
TranscriptomicsDivergent influence of microRNA-21 deletion on murine colitis phenotypes [mRNA]
Background: MicroRNAs (miRNAs) acting as negative regulators of gene expression are differentially expressed in intestinal tissues of patients with inflammatory bowel disease (IBD). Assessing the functional role of miRNAs in murine models of colitis facilitates elucidating the role of specific miRN...
ORGANISM(S): Mus musculus 
2014-07-23 | E-GEOD-59648 | biostudies-arrayexpress
GenomicsChIP-seq of MYST acetyltransferases in RKO cell line
Genome-wide mapping of MYST acetyltransferase subunit BRPF3 in RKO synchronised cells. Genome-wide mapping of MYST acetyltransferase subunit BRPF3 in RKO synchronised cells.
ORGANISM(S): Homo sapiens 
2016-02-05 | E-GEOD-63722 | biostudies-arrayexpress
GenomicsChIP-Seq reveals regulation of the heterochromatic mark, H3K9me3, in NAc following repeated cocaine administration
Repeated administration of the psychostimulant cocaine has been shown to produce persistent alterations in genome-wide transcriptional regulatory networks, chromatin remodeling activity and, ultimately, gene expression profiles in the brain’s reward circuitry. Virtually all previous investigations h...
ORGANISM(S): Mus musculus 
2011-01-18 | E-GEOD-24850 | biostudies-arrayexpress
TranscriptomicsPDK1 Signaling Towards PLK1-Myc Activation Confers Oncogenic Transformation and Tumor Initiating Cell Activation and Resistance to mTOR-targeted Therapy.
Although 3-Phosphoinositide-dependent protein kinase-1 (PDK1) has been predominately linked to PI3K-AKT pathway, it may also evoke additional signaling outputs to promote tumorigenesis. Here we report that PDK1 directly induces phosphorylation of Polo-like kinase 1 (PLK1), which in turn induces Myc ...
ORGANISM(S): Homo sapiens 
2013-07-31 | E-GEOD-30669 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of human SW480 cells stably expressing miRNA34
SW480 were stably transfected with an episomal plasmid expressing GFP and miRNA34 from a bidirectional doxycyclin regulatable promoter (Bornkamm et al Nucleic Acids Res. 2005 Sep 7;33(16)). Polyclonal cell lines were obtained by selection with Hygromycin at 350ug/ml for 10 days. The cell llnes ident...
ORGANISM(S): Homo sapiens 
2008-06-15 | E-GEOD-7678 | biostudies-arrayexpress
Transcriptomicsb-Catenin Mediates the Development of Behavioral Resilience [smallRNA-Seq]
Here we show that ?-catenin mediates pro-resilient and anxiolytic effects in mice in the nucleus accumbens (NAc), a key brain reward region, an effect that is mediated by ?-catenin signaling in D2-type medium spiny neurons (MSNs) specifically. Conversely, blocking ?-catenin function in NAc promotes...
ORGANISM(S): Mus musculus 
2014-11-13 | E-GEOD-61295 | biostudies-arrayexpress
Genomicsuk10k_rare_neuromuscular_rel_2012_11_27-sc-20121218 - samples
UK10K_RARE_NEUROMUSCULAR REL-2012-11-27
EGAD00001000298 | EGA
Genomicsuk10k_rare_neuromuscular_rel_2012_01_13-sc-20120611 - samples
UK10K_RARE_NEUROMUSCULAR REL-2012-01-13
EGAD00001000180 | EGA
Genomicsuk10k_rare_nmwg-rel-2013-03-06-sc-20140327 - samples
UK10K_RARE_NMWG REL-2013-03-06
EGAD00001000804 | EGA
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