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TranscriptomicsEarly postmortem gene expression and its relationship to composition and quality traits in pig Longissimus dorsi muscle
A mRNA expression study has been performed 20-25 minutes postmortem obtained samples from Longissimus dorsi muscle of 59 Duroc x LD/LW pigs to search for gene sequences related to meat quality (pH24, pH45, “Lab” colour coordinates, curing yield and exudation at three different times) or to meat com...
ORGANISM(S): Sus scrofa 
2011-09-19 | E-GEOD-32179 | biostudies-arrayexpress
TranscriptomicsA novel unusual chromosome 11 abnormality: a homozygous somatic deletion of the entire WT1 gene within a heterozygous 11p13 deletion and UPD limited to 11p15 in a Wilms tumor and establishment of an immortalized cell line
We describe a stromal predominant Wilms tumor with a complex, tumor specific chromosome 11 aberration: a homozygous deletion of the entire WT1 gene within a heterozygous 11p13 deletion and an additional region of uniparental disomy (UPD) limited to 11p15.5-p15.2 including the IGF2 gene. The tumor ca...
ORGANISM(S): Homo sapiens 
2016-06-01 | E-GEOD-71265 | biostudies-arrayexpress
TranscriptomicsNovel Regions of Variable DNA Methylation in Human Placenta associated with Newborn Neurobehavioral Traits
Genome-wide profiling of placental DNA methylation in relation to neurobehavioral development. The Illumina 450k methylation array was used to profile 335 samples. These samples have been collected from the Rhode Island Child Health Study (RICHS). Illumina analysis performed on 335 human placentas
ORGANISM(S): Homo sapiens 
2016-06-01 | E-GEOD-75248 | biostudies-arrayexpress
TranscriptomicsRNA-seq of leaf tissue from four genotypes of Lathyrus sativus infected with the Erysiphe pisi
Four L. sativus accessions, exhibiting varying levels of resistance to E. pisi (resistant, partially resistant, partially susceptible, and susceptible), were analysed using dual RNA-seq. Leaflets from each plant were sampled at 0 (non-inoculated), 6, 12, 24, 48, and 72 hours after inoculation. Forty...
ORGANISM(S): Lathyrus sativus 
2025-02-28 | E-MTAB-14647 | biostudies-arrayexpress
TranscriptomicsTranscriptomic analysis using olive varieties and breeding progenies identify candidate genes involved in plant architecture.
Plant architecture is a critical trait in fruit crops that can significantly influence yield, pruning, planting density and harvesting. Most of the existing varieties of olive are traditional and their architecture is poorly suited for modern growing and harvesting systems. This study focuses on the...
ORGANISM(S): Olea europaea 
2016-02-15 | E-GEOD-60284 | biostudies-arrayexpress
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