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ProteomicsProteome of gamma-butyrobetaine-grown Eubacterium limosum ATCC 8486
Eubacterium limosum ATCC 8486 makes acetate and butyrate from various substrates and is found in the human intestine. The proteome of gamma-butyrobetaine -grown Eubacterium limosum was obtained in order to identify enzymes required for growth on gamma-butyrobetaine, in particular to identify compone...
ORGANISM(S): Eubacterium limosum Bacteria 
2021-11-04 | PXD020152 | Pride
Eubacterium limosum Gut microbiome Butyrobetaine Acetogen 
ProteomicsProteome of choline-grown Eubacterium limosum ATCC 8486
Eubacterium limosum ATCC 8486 makes acetate and butyrate from various substrates and is found in the human intestine. The proteome of choline -grown Eubacterium limosum was obtained in order to identify enzymes required for growth on choline, in particular to identify components that are unique to g...
ORGANISM(S): Eubacterium limosum Bacteria 
2025-06-16 | PXD033467 | Pride
Choline demethylation pathway Human gut isolate Acetogenic bacteria 
ProteomicsProteomic Analysis of Diabetic Retinas
As a metabolic disease, diabetes often leads to health complications such as heart failure, nephropathy, neurological disorders, and vision loss. Diabetic retinopathy (DR) affects as many as 100 million people worldwide. The mechanism of DR is complex and known to impact both neural and vascular com...
ORGANISM(S): Mus musculus (Mouse) 
2023-08-16 | PXD044269 | Pride
Retina Proteomics diabetes mellitus Mouse 
ProteomicsProteomic Analysis of Diabetic Retinas (proteoglycomics data only)
As a metabolic disease, diabetes often leads to health complications such as heart failure, nephropathy, neurological disorders, and vision loss. Diabetic retinopathy (DR) affects as many as 100 million people worldwide. The mechanism of DR is complex and known to impact both neural and vascular com...
ORGANISM(S): Mus musculus (Mouse) 
2023-08-16 | PXD044270 | Pride
Mouse Proteomics Retina Diabetes mellitus 
UnknownClonal fitness inferred from time-series modelling of single-cell cancer genomes.
Not available
S-EPMC8396073 | biostudies-literature
TranscriptomicsWhole blood gene expression profiles distinguish clinical phenotypes of venous thromboembolism [Set1]
Recurrent venous thromboembolism (VTE) occurs infrequently following a provoked event but occurs in up to 30% of individuals following an initial unprovoked event. We studied 134 patients with VTE separated into 3 groups: (1) ‘low-risk’ patients had ≥1 provoked VTE; (2) ‘moderate-risk’ pa...
ORGANISM(S): Homo sapiens 
2015-11-23 | E-GEOD-48000 | biostudies-arrayexpress
ProteomicsThe acyl-proteome of Syntrophus aciditrophicus reveals metabolic relationship with benzoate degradation
Syntrophus aciditrophicus is a model syntrophic bacterium that degrades fatty and aromatic acids into acetate, CO2, formate and H2 that are utilized by methanogens and other hydrogen-consuming microbes. The degradation of benzoate by S. aciditrophicus proceeds by a multi-step pathway that involves m...
ORGANISM(S): Syntrophus aciditrophicus SB 
2022-03-16 | PXD025631 | Pride
Syntrophs Lysine acetylation 2d-page Lysine acylation Lc-ms/ms 
UnknownDevelopment of an Injectable Nitric Oxide Releasing Poly(ethylene) Glycol-Fibrin Adhesive Hydrogel.
Not available
S-EPMC6812534 | biostudies-literature
ProteomicsO-GlcNAcase activity is necessary for the molecular signature of the Glioblastoma secretome
Glioblastoma (GBM) is a grade IV glioma highly aggressive and refractory to the therapeutic approaches currently in use nowadays. Although sugar metabolism through the hexosamine biosynthetic pathway (HBP) plays a key role in tumor aggressiveness and progression in different types of cancer, whether...
ORGANISM(S): Homo sapiens (Human) 
2021-09-09 | PXD019496 | Pride
Glioblastoma secretome Lcms O-glcnacase activity 
ProteomicsHost response to S. pneumoniae TIGR4 and ΔpotABCD
The aim of this experiment is to determine the difference in protein expression, if any, in a mouse model of pneumococcal pneumonia using wild type and a polyamine transport operon deletion mutant strain of S. pneumoniae TIGR4, using expression proteomics. Eight week old female C57bl/6 mice were use...
ORGANISM(S): Mus musculus (Mouse) 
2018-10-27 | PXD002300 | Pride
Lung Mouse Streptococcal pneumonia 
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