Flanagan L L - OmicsDI

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Unknown (519)
Transcriptomics (13)
Genomics (10)
Proteomics (3)
Metabolomics (2)

Organisms

Homo sapiens (22)
Mus musculus (3)
Rattus norvegicus (1)

Repository

biostudies-arrayexpress (15)
EGA (8)
pride (3)
MetaboLights (2)

Tissue

Cell suspension culture (1)

Disease

HIV (1)
AIDS-KS, HIV+, nodular (late) stage (1)
Obesity (1)

Technology Type

Mass Spectrometry (3)
Illumina HiSeq 2000 (2)
Mass spectrometry (2)
Shotgun proteomics (2)
Affinity purification coupled with mass spectrometry proteomics (1)
Gel-based experiment (1)

Instrument Platform

Illumina HiSeq 2000 (1)
NextSeq 500 (1)
Direct infusion MS - (1)
Direct infusion MS - positive (1)
Gas Chromatography MS - positive (1)

Publication Date

2016 (4)
2021 (3)
2011 (3)
2013 (2)
2012 (1)
2010 (1)
2009 (1)
2007 (1)
2004 (1)
2022 (1)
2020 (1)
2019 (1)

CHEBI ID

CHEBI:28842 (2)
CHEBI:131608 (1)
CHEBI:132032 (1)
CHEBI:132034 (1)
CHEBI:132037 (1)
CHEBI:132489 (1)
CHEBI:132503 (1)
CHEBI:132731 (1)
CHEBI:133719 (1)
CHEBI:134012 (1)
CHEBI:134236 (1)
CHEBI:134237 (1)
CHEBI:134265 (1)
CHEBI:134487 (1)
CHEBI:135533 (1)
CHEBI:135821 (1)
CHEBI:137155 (1)
CHEBI:137164 (1)
CHEBI:137228 (1)
CHEBI:137570 (1)
CHEBI:137653 (1)
CHEBI:137655 (1)
CHEBI:138860 (1)
CHEBI:140471 (1)
CHEBI:140901 (1)
CHEBI:140902 (1)
CHEBI:140947 (1)
CHEBI:140986 (1)
CHEBI:140987 (1)
CHEBI:141291 (1)

Metabolite Name

(25R)-3beta,4beta-dihydroxycholest-5-en-26-oate(1-) (1)
(S)-Succinyldihydrolipoamide (1)
(Z)-22-Hentriacontene-2,4-dione (1)
1,2-Epoxy-1,2,7,7',8,8',11,12-octahydro-psi,psi-carotene (1)
1,20-Eicosanediol (1)
1-dimethylisopropylsilyloxy-3-methylbut-2-ene (1)
2,4-dihydroxybutyric acid (1)
2-Amino-3-carboxymuconic acid semialdehyde (1)
2-methoxyhydroquinone (1)
24,25,26,27-Tetranor-23-oxo-hydroxyvitamin D3 (1)
3'-Deaminofusarochromanone (1)
3-(3-hydroxyphenyl)-2-phenyl-4-[(E)-2-phenylethenyl]-2,3-dihydro-1-benzofuran-6-ol (1)
3-O-caffeoyl-quinic acid (1)
4-O-B-D-glucopyranosylvanillic acid (1)
4-methoxyresorcinol-1-O-glucoside (1)
5-Hydroxy-6-methoxyindole glucuronide (1)
5-oxo-proline (1)
6-[(3-carboxy-3-hydroxy-2-{[3-(4-hydroxy-3-methoxyphenyl)prop-2-enoyl]oxy}propanoyl)oxy]-3,4,5-trihydroxyoxane-2-carboxylic acid (1)
9-cis-beta-Carotene (1)
Albanin F (1)
Artemoin C (1)
B-cyano-alanine (1)
B-sitosterol (1)
Bis(4-isothiocyanatobutyl) disulfide (1)
Brassinolide (1)
Bufotenine O-glucoside (1)
Cholest-5-ene (1)
DG(16:0) (1)
DG(35:3) (1)
DG(36:3) (1)

Study type

Transcription profiling by array (6)
Methylation profiling by array (3)
Comparative genomic hybridization by array (1)
Other (1)
ChIP-seq (1)
RNA-seq of coding RNA from single cells (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of coding RNA (1)

Release Date

2025 (60)
2022 (54)
2021 (53)
2024 (53)
2023 (44)
2020 (43)
2019 (30)
2015 (30)
2018 (29)
2014 (28)
2016 (26)
2013 (16)
2017 (16)
2009 (14)
2011 (13)
2012 (5)
2010 (5)
2026 (5)
2007 (3)
2008 (2)
2006 (2)
2004 (1)
2005 (1)
2001 (1)

Lab affiliation

Department of Biochemistry and Molecular Biology & Infection and Immunity Program, Biomedicine Discovery Institute, Monash University, Clayton, Victoria 3800, Australia (1)
Department of Biochemistry and Molecular Biology, Pennsylvania State University College of Medicine, Milton S. Hershey Medical Center, Hershey, PA 17033 (1)
Department of Medicine, University of California San Francisco, USA (1)

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Towards engineering ectomycorrhization into switchgrass bioenergy crops via a lectin receptor-like kinase

Soil-borne microbes can establish compatible relationships with host plants, providing a large variety of nutritive and protective compounds in exchange for photosynthesized sugars. However, the molecular mechanisms mediating the establishment of these beneficial relationships remain unclear. Our pr...

2021-08-11 | MTBLS2597 | MetaboLights

Targeted Private Well Outreach Following a Change in Drinking Water Standard: Arsenic and the New Jersey Private Well Testing Act.

Not available

S-EPMC9712494 | biostudies-literature

The effects of ultra-selective beta1-antagonism on the metabolic and cytokine profile in septic shock patients receiving noradrenaline: a sub-investigation from the STRESS-L Randomised Study.

Not available

S-EPMC11754546 | biostudies-literature

Implementation and staff understanding of shared decision-making in the context of recovery-oriented care across US Veterans Health Administration (VHA) inpatient mental healthcare units: a mixed-methods evaluation.

Not available

S-EPMC9152945 | biostudies-literature

Human-derived microRNA 21 regulates indole and L-tryptophan biosynthesis transcripts in the gut commensal <i>Bacteroides thetaiotaomicron</i>.

Not available

S-EPMC11898669 | biostudies-literature

Observations on spiny dogfish ( Squalus acanthias) captured in late spring in a North Carolina estuary.

Not available

S-EPMC4240240 | biostudies-literature

Inside help: An integrative review of champions in healthcare-related implementation.

Not available

S-EPMC5960847 | biostudies-literature

Persistence of seed-based activity following microRNA segmentation

microRNAs are M-bM-^HM-<22 nucleotide regulatory RNAs that are processed into duplexes from hairpin structures and incorporated into Argonaute proteins. We find that a nick in the middle of the guide strand of an miRNA sequence allows for seed-based targeting characteristic of miRNA activity. Insert...

ORGANISM(S): Homo sapiens

2010-11-12 | E-GEOD-25224 | biostudies-arrayexpress

Arsenic in private well water part 2 of 3: Who benefits the most from traditional testing promotion?

Not available

S-EPMC5191845 | biostudies-literature

Estimating summary measures of health: a structured workbook approach.

Not available

S-EPMC1156945 | biostudies-literature