Flavobacterium johnsoniae

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Organisms

Flavobacterium johnsoniae (15)
Flavobacterium johnsoniae UW101 (3)
Flavobacterium anhuiense (1)

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RNA-seq of coding RNA (1)

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Lab affiliation

Biochemistry and Molecular Biology, Michael Smith Laboratories, University of British Columbia, Canada (1)
Department of Biochemistry and Biology, UBC (1)
Department of Biochemistry, University of Oxford, Oxford, United Kingdom (1)
Department of Microbiology, The Ohio State University, USA (1)
LISM – CNRS UMR7255 _ Aix Marseille University Team : Assembly of bacterial multi-protein complexes (1)
Melbourne Dental School, The University of Melbourne (1)
Melbourne Dental School, University of Melbourne Parkville, Victoria, Australia (1)
Research Unit in Biology of Microorganisms (URBM), Namur Research Institute for life Sciences (Narilis), University of Namur, Namur, Belgium (1)
School of Biosciences University of Sheffield Western Bank Sheffield S10 2TN United Kingdom (1)
Soil, Water and Environmental Sciences, Soil Chemistry, Plant Nutrition and Microbiology Unit Institute of Soil, Water and Environmental Sciences Volcani Center Agricultural Research Organization Bet Dagan Israel (1)
University of Namur Research Unit in Biology of Microorganisms (URBM) Namur Research Institute for Life Sciences (NARILIS) Belgium (1)
University of Namur Research Unit in Biology of Microorganisms (URBM) Namur Research Institute for Life Sciences (NARILIS) Belgium. (1)
University of Oxford, Department of Biochemistry South Parks Road, Oxford, OX13QU (1)

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xref:PubMed:31602466 (1)
xref:PubMed:19717629 (1)
xref:PubMed:36724091 (1)

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Proteomic analysis of Flavobacterium johnsoniae

The soil bacterium Flavobacterium johnsoniae was grown on agar plates with or without pectin,bacteria were harvested, lysed, and subjected to LC-MS/MS analysis

ORGANISM(S): Flavobacterium johnsoniae

2021-04-12 | PXD023649 | Pride

Ribosomes lacking bS21 gain function to regulate protein synthesis in Flavobacterium johnsoniae

Ribosomes of Bacteroidia (formerly Bacteroidetes) fail to recognize Shine-Dalgarno (SD) sequences even though they harbor the anti-SD (ASD) of 16S rRNA. This is due to sequestration of the 3’ tail of 16S rRNA in a pocket formed by bS21, bS18, and bS6 on the 30S platform, which functionally occludes ...

ORGANISM(S): Flavobacterium johnsoniae

2023-03-11 | PXD036353 | Pride

Flavobacterium johnsoniae Proteomics Lcmsms

Flavobacterium johnsoniae

Flavobacterium johnsoniae Transcriptome or Gene expression

PRJNA876254 | ENA

Flavobacterium johnsoniae

Flavobacterium johnsoniae Transcriptome or Gene expression

PRJNA876252 | ENA

Flavobacterium johnsoniae

Flavobacterium johnsoniae Transcriptome or Gene expression

PRJNA876253 | ENA

The anti-Shine-Dalgarno element of 16S rRNA is needed for translation of one gene, rpsU, in Flavobacterium johnsoniae

Bacteroidia ribosomes are “blind” to SD sequences, even though they contain the conserved anti-SD (ASD) element of 16S rRNA. A structure of the Flavobacterium johnsoniae ribosome shows that the 3’ tail of 16S rRNA is sequestered in a pocket formed by bS21, bS18, and bS6 on the 30S platform, explaini...

ORGANISM(S): Flavobacterium johnsoniae

2026-03-05 | PXD067211 | Pride

Proteomics 16s rrna Flavobacterium johnsoniae Rpsu Lc-ms/ms

Flavobacterium johnsoniae strain:JH0041

Flavobacterium johnsoniae JH0041 genome sequencing

PRJNA463265 | ENA

Flavobacterium johnsoniae strain:JH0037

Flavobacterium johnsoniae JH0037 genome sequencing

PRJNA463264 | ENA

Flavobacterium johnsoniae UW101

Flavobacterium johnsoniae ribosome profiling

PRJNA564991 | ENA