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ProteomicsProteomic analysis of Flavobacterium johnsoniae
The soil bacterium Flavobacterium johnsoniae was grown on agar plates with or without pectin,bacteria were harvested, lysed, and subjected to LC-MS/MS analysis
ORGANISM(S): Flavobacterium johnsoniae 
2021-04-12 | PXD023649 | Pride
Flavobacterium Proteomics Johnsoniae Lfq Pectin 
ProteomicsHemicellulose utilisation in Flavobacterium
The plant hemicellulose xyloglucan (XyG) is secreted from the roots of numerous plant species, including cereals, and contributes towards soil aggregate formation in terrestrial systems. Whether XyG represents a key nutrient for plant-associated bacteria is unclear. The phylum Bacteroidota are abund...
ORGANISM(S): Flavobacterium sp. F52 
2025-05-07 | PXD053370 | Pride
Flavobacterium Warwick_rtp Hemicellulose Xyloglucan 
ProteomicsRibosomes lacking bS21 gain function to regulate protein synthesis in Flavobacterium johnsoniae
Ribosomes of Bacteroidia (formerly Bacteroidetes) fail to recognize Shine-Dalgarno (SD) sequences even though they harbor the anti-SD (ASD) of 16S rRNA. This is due to sequestration of the 3’ tail of 16S rRNA in a pocket formed by bS21, bS18, and bS6 on the 30S platform, which functionally occludes ...
ORGANISM(S): Flavobacterium johnsoniae 
2023-03-11 | PXD036353 | Pride
Flavobacterium johnsoniae Proteomics Lcmsms 
GenomicsFlavobacterium psychrophilum
Flavobacterium psychrophilum genome sequencing and assembly
PRJNA1471286 | ENA
ProteomicsThe anti-Shine-Dalgarno element of 16S rRNA is needed for translation of one gene, rpsU, in Flavobacterium johnsoniae
Bacteroidia ribosomes are “blind” to SD sequences, even though they contain the conserved anti-SD (ASD) element of 16S rRNA. A structure of the Flavobacterium johnsoniae ribosome shows that the 3’ tail of 16S rRNA is sequestered in a pocket formed by bS21, bS18, and bS6 on the 30S platform, explaini...
ORGANISM(S): Flavobacterium johnsoniae 
2026-03-05 | PXD067211 | Pride
Proteomics 16s rrna Flavobacterium johnsoniae Rpsu Lc-ms/ms 
ProteomicsProteomic analysis of the fish pathogen Flavobacterium columnare
Clinical Flavobacterium columnare ATCC 49512 was grown on Flavobacterium columnare growth medium (FCGM). Bacteria from four colonies at mid-exponential phase were harvested, total proteins were isolated, and identified using 2-DE MALDI TOF/TOF MS and 2-D LC ESI MS/MS analyses. The MS/MS spectra for ...
ORGANISM(S): Flavobacterium columnare 
2016-03-11 | PRD000810 | Pride
GenomicsFlavobacterium
Flavobacterium Genome sequencing
PRJNA1496232 | ENA
GenomicsFlavobacterium psychrophilum
Flavobacterium psychrophilum Genome sequencing
PRJNA1065097 | ENA
GenomicsFlavobacterium
Flavobacterium Genome sequencing and assembly
PRJNA523733 | ENA
GenomicsFlavobacterium
Flavobacterium Raw sequence reads
PRJNA382862 | ENA
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