Flores M M - OmicsDI

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Unknown (3866)
Transcriptomics (1169)
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Genomics (26)
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Homo sapiens (697)
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Drosophila melanogaster (33)
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Corynebacterium glutamicum (6)
Streptomyces coelicolor A3(2) (6)
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Triticum aestivum (6)
Gallus gallus (6)
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Campylobacter jejuni (4)
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Mycobacterium tuberculosis H37Rv (4)
Canis lupus familiaris (4)
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Schizosaccharomyces pombe (3)
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Repository

biostudies-arrayexpress (1188)
pride (81)
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dbGaP (1)

Tissue

Brain (11)
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Choroidal melanocyte (2)
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Leaf (2)
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Prokaryotic cell (2)
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Seed (2)
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Articular cartilage (1)
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Blood (1)
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Blood cell (1)
Bone cancer cell line (1)
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Disease

Normal (30)
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Extranodal NK/T-Cell Lymphoma derived cell line (1)
Liver cancer (1)
Leukemic (1)
Diffuse large B-cell lymphoma (1)
Refractory cytopenia with multilineage dysplasia and ringed sideroblasts (1)
Colon Cancer (1)
Acute type ATLL (1)
Alpha-1 antitrypsin deficiency (1)
Liposarcoma (1)
Malignant fibrous histiocytoma (1)
Small cell lung cancer (1)
Control (1)
NF1 atypical neurofibroma (1)
Normal blood (1)
Osteosarcoma (1)
Ductal carcinoma (1)
Multiple congenital malformation (1)
Peripheral T-cell Lymphoma (1)
Giant Cell Glioblastoma (1)
Burkitt lymphoma (1)
Adenoid cystic carcinoma (1)

Technology Type

Mass Spectrometry (81)
Shotgun proteomics (40)
Bottom-up proteomics (15)
Data-dependent acquisition (8)
Data-independent acquisition (6)
Gel-based experiment (5)
HDMSE (4)
SWATH MS (4)
Mass spectrometry (3)
Affinity purification coupled with mass spectrometry proteomics (3)
All-ion fragmentation (2)
Illumina HiSeq 2000 (1)
NMR spectroscopy (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
DiaPASEF (1)
MSE (1)
Mass spectrometry imaging (1)
Top-down proteomics (1)

Instrument Platform

Q Exactive (10)
Illumina HiSeq 2500 (5)
Agilent DNA Microarray Scanner (3)
Agilent G2565BA (3)
GenePix 4000B [Axon Instruments] (3)
Illumina HiSeq 2000 (3)
NextSeq 500 (3)
Illumina NovaSeq 6000 (2)
Agilent 7890A GC with 5975C inert XL MSD (2)
Agilent (1)
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2100 Bioanalyzer Agilent (1)
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418 [Affymetrix] (1)
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Liquid Chromatography MS - Alternating (LC-MS (Alternating)) (1)
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Liquid Chromatography MS - alternating - reverse phase (1)

Publication Date

2010 (257)
2012 (165)
2011 (156)
2013 (136)
2014 (118)
2015 (92)
2016 (61)
2008 (53)
2009 (50)
2007 (36)
2019 (23)
2025 (18)
2023 (17)
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2020 (15)
2026 (15)
2022 (14)
2017 (11)
2005 (11)
2024 (9)
2006 (8)
2018 (5)
2004 (2)
2002 (1)

CHEBI ID

CHEBI:16449 (3)
CHEBI:26271 (3)
CHEBI:29016 (3)
CHEBI:78320 (3)
CHEBI:15354 (2)
CHEBI:15428 (2)
CHEBI:15611 (2)
CHEBI:15698 (2)
CHEBI:15729 (2)
CHEBI:15741 (2)
CHEBI:15756 (2)
CHEBI:16040 (2)
CHEBI:16335 (2)
CHEBI:16450 (2)
CHEBI:16704 (2)
CHEBI:16708 (2)
CHEBI:16737 (2)
CHEBI:16750 (2)
CHEBI:16811 (2)
CHEBI:16865 (2)
CHEBI:16919 (2)
CHEBI:17084 (2)
CHEBI:17126 (2)
CHEBI:17172 (2)
CHEBI:17562 (2)
CHEBI:17568 (2)
CHEBI:17596 (2)
CHEBI:17748 (2)
CHEBI:17821 (2)
CHEBI:17822 (2)

Metabolite Name

Arginine (2)
Creatine (2)
Creatinine (2)
Lactate (2)
Proline (2)
(3S)-3-hydroxy-3-methylglutaryl-CoA (1)
(7Z,10Z)-hexadecadienoylcarnitine (1)
(9Z,12Z)-3-hydroxyhexadecadienoylcarnitine (1)
(N(omega)-L-arginino)succinic acid (1)
(R)-3-(4-hydroxyphenyl)lactic acid (1)
1,11-Undecanedicarboxylic acid (1)
12-aminododecanoic acid (1)
2'-deoxyadenosine 5'-monophosphate (1)
2'-deoxycytidine (1)
2'-deoxycytosine 5'-monophosphate (1)
2'-deoxyguanosine (1)
2'-deoxyguanosine 3'-monophosphate (1)
2'-deoxyuridine (1)
2-hydroxybenzenesulfonic acid (1)
2-hydroxybutyrate (1)
2-hydroxyglutaric acid (1)
2-hydroxyisovalerate (1)
2-hydroxyvalerate (1)
2-oxoadipic acid (1)
2-oxobutanoic acid (1)
2-oxosuccinamic acid (1)
3'-AMP (1)
3'-UMP (1)
3-Cresotinic acid (1)
3-Hydroxybenzoic acid (1)

IsPrivate

False (1)

Modelling Approach

Differential equation model (1)

Study type

Comparative genomic hybridization by array (704)
Transcription profiling by array (247)
ChIP-chip by tiling array (42)
Unknown experiment type (38)
ChIP-chip by array (38)
Methylation profiling by array (34)
RNA-seq of coding RNA (15)
Genotyping by array (14)
Other (11)
DNA-seq (8)
ChIP-seq (7)
Transcription profiling by tiling array (5)
Methylation profiling by high throughput sequencing (4)
RNA-seq of non coding RNA (4)
Human - Two-color microarray (2)
One-color microarray (2)
Transcription profiling by RT-PCR (2)
Transcription profiling by SAGE (1)
Baseline (1)
Two-color microarray (1)
Cell line - Two-color microarray (1)
Tiling path by array (1)
High-throughput sequencing (1)
Animal - High-throughput sequencing (1)
Trajectory (1)
Ribo-seq (1)
MicroRNA profiling by array (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2025 (522)
2022 (518)
2023 (459)
2024 (440)
2021 (438)
2020 (344)
2010 (297)
2012 (226)
2019 (222)
2015 (219)
2013 (219)
2014 (212)
2011 (202)
2018 (164)
2016 (145)
2017 (123)
2026 (72)
2009 (70)
2008 (63)
2007 (45)
2006 (18)
2005 (17)
2004 (6)
2003 (4)
2002 (2)
2001 (2)
2000 (2)
1999 (1)
1998 (1)
1997 (1)

Lab affiliation

Department of Leukemia, Division of Cancer Medicine, The University of Texas MD Anderson Cancer Center, Houston, TX (4)
Faculty of Helath Sciences. University of Copenhagen. Copenhagen. Denmark (3)
Biomedical Research Center, Slovak Academy of Sciences (2)
Faculty of Health Sciences, University of Copenhagen, Copenhagen, Denmark (2)
Leukemia Department, MD Anderson Cancer Center, Houston, TX 77030 (2)
Barts Cancer Institute, Queen Mary University of London (1)
Basic Immune System of Plants / Protein Mass Spectrometry Max Planck Institute for Plant Breeding Research Carl-von-Linne-Weg 10, 50829 Cologne, Germany (1)
Bioanalytics department, Proteomics group, Leibniz-Institut für Analytische Wissenschaften – ISAS – e.V., Dortmund, Germany (1)
Biochemistry Department, Cinvestav-IPN (1)
CENTD, Instituto Butantan (1)
California State University Long Beach (1)
Cell Cycle Unit, Children's Medical Research Institute, 214 Hawkesbury Road, Westmead, NSW 2145, Australia (1)
Cellular Biology Department, Oxidative Stress and Neurodegeneration group, Ciudad Real Medical School, Castilla-La Mancha University (1)
Centre of Excellence in New Target Discovery (CENTD), Butantan Institute, Sao Paulo, Brazil. (1)
Centro Nacional de Biotecnología CNB/CSIC (1)
Chief, Molecular Parasitology and Entomology Unit Laboratory of Malaria and Vector Research National Institutes of Health (1)
Church Lab, Department of Genetics, Harvard Medical School, Boston, USA (1)
Deaprtment of Biochemistry, University of Oxford (1)
Departamento de Bioquímica, Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional (Cinvestav). Av. IPN No. 2508, Ciudad de México, C.P. 07360. (1)
Department of Biochemistry and Microbiology, L-Probe Lab Ghent University (1)
Department of Biochemistry, Cinvestav-IPN. (1)
Department of Biochemistry, University of Cambridge, United Kingdom (1)
Department of Biochemistry, University of Oxford, United Kingdom (1)
Department of Drug Design and Pharmacology. University of Copenhagen. Denmark (1)
Department of Food Science and Technology, The Ohio State University, Columbus, OH, USA (1)
Department of Laboratory Medicine, Wiita Lab, University of California, San Francisco, USA (1)
Department of Pathology and Medicine, University of California at San Diego, La Jolla, CA 92093, USA (1)
Department of Rickettsiology Biomedical Research Center Sloval Republic (1)
Department of Veterinary disease biology. Faculty of health sciences. University of Copenhagen. Copehnagen. Denmark (1)
European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI) (1)

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Gene expression profiles of M. tuberculosis constitutively expressing the transcriptional regulator DosR (Rv3133c).

Background: Conflicting results have been reported about the role of the two-component sensor and transcriptional regulator DosS/DosR, controlling the expression of the dormancy DosR regulon, for in vivo virulence of M. tuberculosis. Here, we have used a new approach to further analyze the relevance...

ORGANISM(S): Mycobacterium tuberculosis

2012-06-12 | E-GEOD-19838 | biostudies-arrayexpress

Revision of the subgenus Mesopraocis Flores & Pizarro-Araya of the Neotropical genus Praocis Eschscholtz (Coleoptera, Tenebrionidae, Pimeliinae).

Not available

S-EPMC9848888 | biostudies-literature

High-resolution, genome-wide analysis of human metastatic neuroblastoma samples by array-Comparative Genomic Hybridization (aCGH)

Less than 30% of children with high-risk (HR) metastatic neuroblastoma (NB) show a long survival (Pearson 2000). In order to identify novel molecular prognostic markers useful to better predict patientsM-bM-^@M-^Y relapse risk estimation, we performed genome- and/or transcriptome-wide analyses of 12...

ORGANISM(S): Homo sapiens

2012-10-05 | E-GEOD-35953 | biostudies-arrayexpress

Dataset on bryophyte species distribution across an elevational gradient on Flores Island.

Not available

S-EPMC12658425 | biostudies-literature

The M Protein of Streptococcus pyogenes Strain AP53 Retains Cell Surface Functional Plasminogen Binding after Inactivation of the Sortase A Gene.

Not available

S-EPMC7186463 | biostudies-literature

Molecular characterization of Escherichia coli producing extended-spectrum β-lactamase CTX-M-14 and CTX-M-28 in Mexico.

Not available

S-EPMC10920525 | biostudies-literature

Large-scale mass wasting on small volcanic islands revealed by the study of Flores Island (Azores).

Not available

S-EPMC6141455 | biostudies-literature

Late Pleistocene songbirds of Liang Bua (Flores, Indonesia); the first fossil passerine fauna described from Wallacea.

Not available

S-EPMC5563437 | biostudies-literature

Marine algal flora of Flores and Corvo Islands, Azores.

Not available

S-EPMC7875959 | biostudies-literature

Characterization of mycobacterial oligopeptide permease system

M. tuberculosis strain 1254 wild type (WT) and its isogenic delta Rv3662c-Rv3665c KO (opp KO) and complemented opp::opp were cultured in vitro, in liquid 7H9 media supplemented with OADC and 0.05% Tween 80, 0.5% glycerol, in a 150 mL volume, contained in roller bottles, incubated at 37oC. Growth wa...

ORGANISM(S): Mycobacterium tuberculosis

2009-10-06 | E-GEOD-18426 | biostudies-arrayexpress

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