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UnknownRedB, a Member of the CRP/FNR Family, Functions as a Transcriptional Redox Brake.
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S-EPMC9603854 | biostudies-literature
UnknownModulation of global low-frequency motions underlies allosteric regulation: demonstration in CRP/FNR family transcription factors.
Not available
S-EPMC3769225 | biostudies-literature
TranscriptomicsComparative expression analysis between logarithmic and stationary phase of T. thermophilus HB8 on a synthetic medium
We observed the expression profile of the total mRNA of Thermus thermophilus HB8 wild-type strain grown in a synthetic medium at 70°C. Three wild-type T. thermophilus HB8 strains were pre-cultured at 70°C for 16 h in 3 ml of synthetic medium. The cells (2 ml) were inoculated into 500 ml of the same ...
ORGANISM(S): Thermus thermophilus HB8 
2008-08-03 | E-GEOD-11671 | biostudies-arrayexpress
TranscriptomicsTime course of the mRNA expression in wild-type Thermus thermophilus HB8 strain grown on a rich medium.
We observed the expression profile of the total mRNA of wild-type Thermus thermophilus HB8 strain grown in a rich (TR) medium at 70°C. Keywords: time course Three wild-type T. thermophilus HB8 strains were pre-cultured at 70°C for 16 h in 3 ml of TR medium containing 0.8% polypeptone, 0.4% yeast e...
ORGANISM(S): Thermus thermophilus HB8 
2010-05-25 | E-GEOD-10368 | biostudies-arrayexpress
TranscriptomicsComparative expression analysis between SdrP (TTHA1359) deletion mutant and wild-type of T. thermophilus HB8
We observed the expression profile of the total mRNA of TTHA1359 deletion mutant of Thermus thermophilus HB8 strain grown in a rich (TR) medium at 70°C compared with that of wild type. Keywords: cell type comparison Four wild-type and mutant T. thermophilus HB8 strains were each pre-cultured at 70Â...
ORGANISM(S): Thermus thermophilus HB8 
2010-05-25 | E-GEOD-10369 | biostudies-arrayexpress
TranscriptomicsSuperSeries for the study of expression analysis of the SdrP (TTHA1359) in T. thermophilus HB8
This SuperSeries is composed of the following subset Series: GSE10368: Time course of the mRNA expression in wild-type Thermus thermophilus HB8 strain grown on a rich medium. GSE10369: comparative expression analysis between TTHA1359 deletion mutant and wild-type of T. thermophilus HB8 GSE11671: com...
ORGANISM(S): Thermus thermophilus HB8 
2010-05-25 | E-GEOD-10370 | biostudies-arrayexpress
TranscriptomicsFine-tuning modulation of oxidation-mediated posttranslational control of Bradyrhizobium diazoefficiens FixK2 transcription factor
Genome-wide transcription profiling of B. diazoefficiens (formerly B. japonicum) wild type and a C183D FixK2 encoding strain which were cultured under microoxic conditions (0.5% O2). For comparison, this work also includes the expression data samples GSM210246 to GSM210268, and samples GSM313727 to ...
ORGANISM(S): Bradyrhizobium diazoefficiens Bradyrhizobium diazoefficiens USDA 110 
2022-05-05 | GSE196031 | GEO
TranscriptomicsExpanding the regulon of the Bradyrhizobium diazoefficiens NnrR transcription factor: New insights into denitrification pathway
Genome-wide transcription profiling of B. diazoefficiens (formerly B. japonicum) wild type and nnrR mutant strain which were grown in free-living anoxic denitrifying conditions (using nitrate as final electron aceptor). This study includes also the expression data of the wild type strain grown oxica...
ORGANISM(S): Bradyrhizobium diazoefficiens Bradyrhizobium diazoefficiens USDA 110 
2019-08-22 | GSE130684 | GEO
GenomicsChIP-Seq of the Sinorhizobium meliloti CRP-like protein Clr in combination with either cAMP or cGMP under different growth conditions
In bacteria, Crp-Fnr superfamily transcription factors mediate 3',5'-cyclic adenosine monophosphate (cAMP) and 3',5'-cyclic guanosine monophosphate (cGMP) signaling. The CRP-like protein Clr of the soil-dwelling and plant-symbiotic α-proteobacterium Sinorhizobium meliloti was previously shown to act...
ORGANISM(S): Sinorhizobium meliloti 
2023-03-23 | E-MTAB-11788 | biostudies-arrayexpress
TranscriptomicsElectric current induced genes in Escherichia coli
The control of cellular processes by direct electronic interface will facilitate the development of biosensors, synthetic biology, and nanobiotechnology by providing the means to pass information from synthetic to living elements of hybrid systems. To investigate the potential of manipulating cellu...
ORGANISM(S): Escherichia coli 
2010-06-25 | E-GEOD-5192 | biostudies-arrayexpress
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