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TranscriptomicsGermination of Leafy Spurge (Euphorbia esula) Seeds under Constant and Alternating Temperature
Transcriptome changes were investigated for Euphorbia esula (leafy spurge) seeds with a focus on the effect of constant and diurnal fluctuating temperature on dormancy and germination. Leafy spurge seeds do not germinate when incubated for 21 days at 20°C constant temperatures, but nearly 30% germin...
ORGANISM(S): Euphorbia esula 
2010-06-01 | E-GEOD-18533 | biostudies-arrayexpress
TranscriptomicsLow temperatures impact dormancy status, flowering competence, and transcript profiles in crown buds of leafy spurge.
Leafy spurge (Euphorbia esula) is an herbaceous perennial weed that produces vegetatively from an abundance of underground adventitious buds. The objectives of this study were to determine how mimicking natural seasonal conditions (photoperiod and temperature) under controlled environmental conditio...
ORGANISM(S): Euphorbia esula 
2010-05-19 | E-GEOD-19217 | biostudies-arrayexpress
TranscriptomicsExpression analysis of leafy spurge crown buds during seasonal dormancy transitions.
This submission contains the RNAseq data from a study of leafy spurge crown buds transitioning through a seasonal dormancy time course where buds transitioned from paradoprmancy to endodormancy and then to ecodormancy. The sequences in this study were mapped to an assembled transcriptome built from ...
ORGANISM(S): Euphorbia esula 
2015-08-05 | E-GEOD-71321 | biostudies-arrayexpress
TranscriptomicsExpression analysis of leafy spurge crown buds during seasonal dormancy transitions after glyphosate treatments.
This submission contains the RNAseq data from a study of leafy spurge crown buds transitioning through a seasonal dormancy time course following glyphosate treatments where buds transitioned from paradoprmancy to endodormancy and then to ecodormancy. The sequences in this study were mapped to an ass...
ORGANISM(S): Euphorbia esula 
2015-08-05 | E-GEOD-71406 | biostudies-arrayexpress
TranscriptomicsBreaking endodormancy in leafy spurge crown buds by dehydration-stress and vernalization identifies overlapping molecular networks linked to growth regulators
Persistence of the invasive perennial weed leafy spurge is mainly attributed to seasonal production of underground adventitious buds (UABs), which undergo well-defined phases of dormancy (para-, endo- and eco-dormancy). These well-defined phases of dormancy also allow UABs of leafy spurge to survive...
ORGANISM(S): Euphorbia esula 
2011-04-05 | E-GEOD-28047 | biostudies-arrayexpress
UnknownPrecore and Basal Core Promoter Hepatitis B Virus (HBV) Variants Are Present From a Young Age and Differ Across HBV Genotypes.
Not available
S-EPMC8570313 | biostudies-literature
GenomicsAboriginal Australia Genome Consortium
Data Access Committee EGAC00001000465
EGAC00001000465 | EGA
Genomicsena-DATASET-UNIBE-07-04-2016-07:41:15:505-596 - samples
Mapped data (bam files) for high-throughput whole genome sequence data for 83 modern Aboriginal Australians
EGAD00001002001 | EGA
Genomics37a30206-29b3-47a0-90c4-eee326fe5b8b - samples
Genotype calls for 83 Aboriginal Australian genomes split by chromosomes. In short, genotypes were called individually with samtools. They were subsequently filtered with thresholds related to sequencing depth, location of variants, sequencing error, and strand bias. Once combined, the genotypes wer...
EGAD00001004155 | EGA
GenomicsRFMix
This dataset contains the per-chromosome RFMix input and output files for the local ancestry inference of 59 Aboriginal Australian genomes as reported in Malaspinas et al., 2016. Local ancestry was inferred assuming four mixing ancestral populations represented by: Europeans (27 individuals), Asians...
EGAD00010001575 | EGA
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