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TranscriptomicsRNAseq reveals different transcriptional profils of Klebsiella pneumoniae planktonic, sessile and biofilm-dispersed cells
Purpose: The goal of this study was to use RNA-seq to define the Klebsiella pneumoniae transcriptome recorded under 5 different experimental conditions, and to identify signature genes of each condition by comparing global transcriptional profiles. Methods: mRNA profiles were generated for Klebsiell...
ORGANISM(S): Klebsiella pneumoniae 
2016-03-03 | E-GEOD-71754 | biostudies-arrayexpress
TranscriptomicsMicrofluidic platform for monitoring Saccharomyces cerevisiae mutation accumulation assay
Saccharomyces cerevisiae wildtype (YPH) and ung1-deleted strains were cultivated in mutation accumulation experiments over several bottlenecks (0-50-100-150). Two different cutlure systems were used either (i) using random colony selection and plating on petri dish (classical); or (ii) a microfluidi...
ORGANISM(S): Saccharomyces cerevisiae S288C 
2021-08-01 | E-MTAB-10259 | biostudies-arrayexpress
TranscriptomicsSleep in a dish: key electrophysiological, molecular, and metabolic signatures of sleep and wakefulness revealed in primary cortical cultures
Although at the organismal level sleep is defined as a behavioral state, at the level of the cerebral cortex sleep has a distinct local and use-dependent aspect. This observation raises the question whether sleep is a functional property of a complex brain or occurs at the level of neuronal assembli...
ORGANISM(S): Mus musculus 
2012-08-31 | E-GEOD-33491 | biostudies-arrayexpress
TranscriptomicsIGR_CREMEC_CGH_STYDY_LL
Patient-derived xenograft models are considered to represent the heterogeneity of human cancers and might be more relevant preclinical models to evaluate effective therapeutic agents. Our consortium joins efforts to extensively develop and characterize a new collection of patient-derived colorectal ...
ORGANISM(S): Homo sapiens 
2012-07-27 | E-MTAB-992 | biostudies-arrayexpress
TranscriptomicsRNA-seq of cancer cell collagen tracks
Collagen tracks deposited by breast cancer cells contain specific miRNAs which reprogram non-invasive cells into highly pro-metastatic ones by inducing a partial epithelial–mesenchymal transition (EMT) associated with an increase in ECM degradation and cell invasiveness.
ORGANISM(S): Homo sapiens 
2025-12-14 | E-MTAB-15636 | biostudies-arrayexpress
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