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Unknown (16438)
Genomics (587)
Transcriptomics (344)
Proteomics (136)
Metabolomics (61)
Models (42)
Clinical (40)
Other (16)
Genomic (2)
Methylation profiling (1)

Organisms

Homo sapiens (197)
Mus musculus (120)
Rattus norvegicus (21)
Bos taurus (12)
Salmo salar (7)
Saccharomyces cerevisiae (6)
Sus scrofa (5)
Macaca mulatta (5)
Gallus gallus (4)
Macaca fascicularis (3)
Oryctolagus cuniculus (2)
Arabidopsis thaliana (2)
Nannochloropsis oceanica (2)
Scophthalmus maximus (2)
Phytophthora sojae (2)
Chlamydomonas reinhardtii (2)
Canis lupus familiaris (1)
Mammalia (1)
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Escherichia sp. TW14265 (1)
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Streptococcus mutans UA159 (1)
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Populus maximowiczii x Populus nigra (1)
Spodoptera frugiperda (1)
Theobroma cacao (1)
Coturnix japonica (1)
Equus caballus (1)
Oryza sativa Indica Group (1)

Organisms

Mus musculus (78)
Homo sapiens (70)
Rattus norvegicus (12)
Pimephales promelas (8)
Bos taurus (6)
Sus scrofa (4)
Macaca mulatta (4)
soil metagenome (4)
Achaea janata (3)
rat gut metagenome (3)
unidentified (3)
Gallus gallus (3)
human gut metagenome (3)
mouse gut metagenome (3)
Dinoroseobacter shibae DFL 12 = DSM 16493 (2)
Enchytraeus crypticus (2)
Pseudomonas aeruginosa (2)
Lactiplantibacillus plantarum (2)
plant metagenome (2)
Echinochloa crus-galli (2)
bioreactor metagenome (2)
Bacillus sp. CKA1(RSM) (1)
Eggerthella lenta DSM 2243 (1)
Kosakonia sp. Pn16 (1)
Bacillus sp. OA1 (1)
Vreelandella sp. RoRo2 (1)
Phanerodontia chrysosporium (1)
Planococcus maritimus (1)
Carpinus putoensis (1)
Prunus clarofolia (1)

Repository

ENA (549)
biostudies-arrayexpress (196)
geo (172)
pride (59)
MetaboLights (55)
MassIVE (51)
BioModels (36)
EGA (29)
iProX (16)
PanoramaPublic (7)
GNPS (6)
PMR (4)
jPOST (3)
Cell Collective (2)
dbGaP (2)
PAXDB (2)
EVA (1)

Tissue

Cell culture (13)
Liver (4)
Blood plasma (3)
Stem cell (3)
Blood (3)
Plant cell (2)
Heart (2)
Blood cell (2)
Mesenchymal stem cell of adipose (1)
Hypocotyl (1)
Biofilm (1)
Eukaryotic cell (1)
Knee (1)
Telencephalon (1)
White adipose tissue (1)
Hypothalamus (1)
Bone matrix (1)
Intestine (1)
Brown adipose tissue (1)
Chondrocyte (1)
Leukocyte (1)
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Feces (1)
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Root (1)
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Primary cell (1)
Lung (1)

Disease

Malignant neoplasm of breast of unspecified site (7)
Neoplasms (3)
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Alzheimer's disease (2)
Secondary malignant neoplasm of large intestine and rectum (2)
Inflammatory Bowel Diseases (2)
Constipation (2)
Malignant neoplasm of colon, unspecified (2)
Pancreatic Neoplasms (2)
Tuberculosis (1)
Androgen-dependent prostate cancer (1)
Non-diseased (1)
None (1)
Normal (1)
Large cell lung cancer (1)
Gastric Neoplasms (1)
Radiation proctitis (1)
Anxiety disorders (1)
Colorectal and gastric cancer (1)
Non-squamous non-small cell lung cancer (1)
Peritoneal carcinomatosis of colorectal cancer (1)
Safety and Efficacy of Tattooing Substance (1)
Colorectal cancer/gynecological disease (1)
Breast cancer (1)
Cancer (1)
Infections (1)
Patients with Metastatic Breast Cancer, Dukeâ??s C Colon Cancer or Metastatic Colorectal Cancer (1)
Metastatic Breast Cancer, Dukeâ??s C Colon Cancer or Metastatic Colorectal Cancer (1)
Colorectal (1)
Carcinoma (1)

Technology Type

Mass Spectrometry (59)
Mass spectrometry (38)
Shotgun proteomics (34)
Mass spectrometry assay (15)
Bottom-up proteomics (11)
Data-dependent acquisition (8)
SWATH MS (3)
Gel-based experiment (3)
Illumina HiSeq 2500, ILLUMINA (2)
NMR spectroscopy (2)
Data-independent acquisition (2)
Illumina MiSeq, Illumina Genome Analyzer IIx (1)
Illumina HiSeq 2000 (1)
Metaproteomics (1)
Proteogenomics (1)
Mass spectrometry imaging (1)
MSE (1)
HDMSE (1)
SRM/MRM (1)
Top-down proteomics (1)
Affinity purification coupled with mass spectrometry proteomics (1)

Instrument Platform

Illumina NovaSeq 6000 (13)
Q Exactive (12)
NextSeq 500 (7)
Illumina HiSeq 2500 (4)
Impact (4)
NextSeq 2000 (3)
Illumina HiSeq 2000 (3)
DNBSEQ-T7 (2)
NextSeq 550 (2)
Illumina HiSeq 3000 (2)
Illumina HiSeq 4000 (2)
DNBelab C Series High-throughput Single-cell RNA Library Preparation Set V3.0 (MGI Tech) (1)
DNBelab C-TaiM droplet generator (MGI Tech) (1)
Avatarget 12-well dual-chamber organ-on-chip system; AvatarFlow Organ Chip Flow Initiation Controller System (Avatarget Co., Ltd., Suzhou, China) (1)
Qiagen RNEasy Mini ki (1)
BD FACSAriaIIu cell sorter (1)
Poly-T oligo-attached magnetic beads (1)
High-performance computing workstation (1)
Protocol computer workstation running R statistical software (1)
Thermal cycler (PCR); Covaris ME220 focused ultrasonicator; magnetic separation rack; Agilent TapeStation system (D5000 and D1000 ScreenTape assays); Qubit fluorometer or equivalent; microcentrifuge. (1)
JANUS® G3 MDT automated liquid handling workstation (PerkinElmer); thermal cycler or incubator (42 °C); Zymo DNA Clean & Concentrator columns; AMPure XP magnetic bead purification system; magnetic separation rack. (1)
Multichannel pipettes or automated liquid handler; 384-well tissue culture plates; Class II biological safety cabinet; CO₂ incubator (37 °C, 5% CO₂). (1)
PromethION (1)
Agilent G2505B scanner (1)
GenePix 4000B [Axon Instruments] (1)
NA (1)
- (1)
N/A (1)
DNBSEQ-G400 (1)
Illumina MiSeq (1)

Publication Date

2026 (78)
2024 (57)
2025 (54)
2021 (44)
2023 (32)
2020 (31)
2011 (30)
2017 (27)
2019 (25)
2015 (25)
2016 (23)
2022 (23)
2018 (23)
2013 (23)
2009 (21)
2012 (19)
2010 (19)
2014 (17)
2008 (10)
2005 (8)
2007 (3)
2002 (1)

UNIPROT ID/AC

P60568 (2)
P07278 (1)
P06245 (1)
P05986 (1)
P06244 (1)
P19158 (1)
P01120 (1)
P53152 (1)
P52490 (1)
P32849 (1)
P0CG63 (1)
P06104 (1)
P10862 (1)
P15873 (1)
P04821 (1)
P22434 (1)
P06776 (1)
P28239 (1)
P08678 (1)
P01137 (1)
A0A1D5R940_MACMU (1)
A0A1D5Q515_MACMU (1)
F7FXB6_MACMU (1)
F7H2I7_MACMU (1)
A0A1D5R5D8_MACMU (1)
F7FDZ2_MACMU (1)
F7BAI3_MACMU (1)
H9YYR9_MACMU (1)
F6WGW5_MACMU (1)
A0A5F8AUX3_MACMU (1)

CHEBI ID

CHEBI:16235 (21)
CHEBI:17368 (20)
CHEBI:17596 (19)
CHEBI:16708 (19)
CHEBI:16335 (19)
CHEBI:17172 (14)
CHEBI:16450 (14)
CHEBI:17712 (14)
CHEBI:28997 (14)
CHEBI:17256 (14)
CHEBI:15414 (14)
CHEBI:11812 (13)
CHEBI:11596 (13)
CHEBI:77740 (13)
CHEBI:17594 (13)
CHEBI:17164 (13)
CHEBI:74393 (13)
CHEBI:77802 (13)
CHEBI:35621 (13)
CHEBI:58680 (13)
CHEBI:74631 (13)
CHEBI:15593 (13)
CHEBI:132957 (13)
CHEBI:74604 (13)
CHEBI:32528 (13)
CHEBI:58675 (13)
CHEBI:58083 (13)
CHEBI:73784 (13)
CHEBI:73898 (13)
CHEBI:320061 (13)

Metabolite Name

Creatinine (11)
Carnosine (8)
Spermidine (7)
Taurine (7)
Allantoin (6)
Palmitic acid (6)
Dopamine (5)
Serotonin (5)
Taurocholic acid (5)
Deoxycholic acid (5)
Malic acid (5)
Histamine (5)
Glutaric acid (5)
Creatine (5)
Cytidine (5)
Xanthine (5)
DOPA (4)
Val (4)
Tyr (4)
Trp (4)
Thr (4)
Ser (4)
Pro (4)
Phe (4)
Met (4)
Lys (4)
Leu (4)
Ile (4)
His (4)
Gly (4)

First Public Date

2026 (121)
2025 (96)
2024 (67)
2023 (49)
2022 (40)
2014 (38)
2021 (33)
2019 (31)
2020 (23)
2018 (17)
2017 (11)
2015 (10)
2013 (7)
2016 (6)

Modelling Approach

Ordinary differential equation model (18)
Constraint-based model (14)
Physiologically based pharmacokinetic model (1)
Logical model (1)

Study status

Completed (20)
Recruiting (9)
Not yet recruiting (5)
Not provided (4)
Terminated (2)

Lab affiliation

LIST_Environmental and industrial biotechnologies Bioprocessing and formulation L-4940, BASCHARAGE LUXEMBOURG (2)
Associate professor Department of Biotechnology National Institute of Pharmaceutical Education and Research, Hajipur, Bihar-844102 (1)
Translational Biology and Engineering Program, Ted Rogers Centre for Heart Research, Toronto, Ontario M5G 1M1, Canada (1)
School of Biosciences (1)
Clinical Proteomics Universitätsklinikum Knappschaftskrankenhaus Bochum GmbH Klinik für Anästhesiologie, Intensivmedizin und Schmerztherapie & Medizinisches Proteom-Center, Ruhr-University Bochum (1)
Living Systems Institute, University of Exeter, UK (1)
Chair, Department of Environmental and Global Health, College of Public Health and Health Professions, University of Florida (1)
University of Gdansk, Laboratory of Mass Spectrometry (1)
Departamento de Fisiologia e Biofísica, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte – MG, CEP: 31270-901, Brazil. (1)
Department of Molecular Systems Biology, Helmholtz-Centre for Environmental Research - UFZ, Leipzig, Germany (1)
Ultrasound Department, The Second Affiliated Hospital of Fujian University of Traditional Chinese Medicine (1)
Kings College University London (1)
German Cancer Research Center DKFZ (1)
Department of Life, Health and Environmental Sciences (1)
Molecular and Applied Microbiology, Leibniz Institute for Natural Product Research and Infection Biology, Hans Knöll Institute Jena (Leibniz-HKI), Jena, Germany (1)
CNC-Center for Neuroscience and Cell Biology, University of Coimbra, 3004-517 Coimbra, Portugal; Biocant, Biotechnology Innovation Center, 3060-197 Cantanhede, Portugal (1)
Medical Mycology Lab Biology Department Maynooth University Ireland (1)
Department of Analytical Chemistry and CAS Key Laboratory of Receptor Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, 201203, China (1)
Analytical Chemistry Facility - Istituto Italiano di Tecnologia, Italy (1)
Canada Research Chair in Bioinformatics University Professor David R. Cheriton School of Computer Science University of Waterloo, Ontario, Canada (1)
Nanomedicine and Nanotoxicology Group, Physics Institute of São Carlos, São Paulo University. Avenida Trabalhador São Carlense, 400, CEP13560970 (Brazil) Phone: (+55) 16 3373 8656, São Carlos – SP – Brazil. (1)
Department of Chemistry, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand (1)
NICM HRI, Western Sydney University, NSW, Australia (1)
Laboratory for Medical Mass spectrometry Aalborg University Fredrik Bajersvej 3B 9220 Aalborg (1)
LIST-ERIN-BEAP, Bascharage, Luxembourg (1)
Department of Internal Medicine V, Heidelberg University Hospital, 69120 Heidelberg, Germany (1)
University of Groningen. GRIP. (1)
Kids Neuroscience Centre, Kids Research, Sydney Children Hospital Network (1)
Roche (1)
Laboratoire des bactériophages et de phagothérapie, CRISP, CHUV, Lausanne, Switzerland (1)

Keyword

Camptothecin (2)
Irinotecan (2)
Bevacizumab (2)
Locally advanced rectal cancer (resectable) (1)
Locally advanced rectal cancer (non-resectable) (1)
Nanopharmaceutical (1)
CLRX101 (1)
Drug screening (1)
Organoids-on-a-chip (1)
Methylnaltrexone bromide for SC injection: 12 mg (0.6 mL, 20 mg/mL) in prefilled syringes (1)
ENTRECTINIB (Ro 710-2122/F15) FILM-COATED TABLETS, 50 mg (20 x 2.5 mg) (1)
ENTRECTINIB (Ro 710-2122/F16) FILM-COATED TABLETS, 50 mg (20 x 2.5 mg) (1)
Entrectinib (RXDX-101) F06 hard capsules, 200 mg (Ro 710 2122/F04) (1)
Entrectinib F06 HPMC Capsules (unmilled/coarse API), 200 mg (1)
Epinephrine (1)
Bupivacaine (1)
Tap block (1)
Liposomal bupivacaine (1)
Exparel (1)
Talzenna (1)
BRCA mutation (1)
Bioavailability (1)
Food effect (1)
ATM mutation (1)
PARP inhibitor (1)
Abiraterone Acetate (1)
AZD4635 (1)
Oleclumab (1)
Enzalutamide (1)
Regional anesthesia (1)

IsPrivate

False (36)

Model Flag

Non Kinetic (2)

Submitter Keywords

Immuno-oncology (4)
FROG (1)

Classification

bacteria (9)
viruses (2)

Modification

Not available (1)

Study type

Transcription profiling by array (125)
RNA-seq of coding RNA (27)
Interventional (24)
Other (11)
Comparative genomic hybridization by array (7)
RNA-seq of coding RNA from single cells (6)
MicroRNA profiling by array (5)
RNA-seq of total RNA (5)
Observational (4)
Animal - High-throughput sequencing (3)
Genotyping by array (2)
Methylation profiling by high throughput sequencing (2)
Unknown experiment type (1)
Plant - Two-color microarray (1)
Animal - One-color microarray (1)
ChIP-chip by tiling array (1)
One-color microarray (1)
Human - High-throughput sequencing (1)
Cell line - One-color microarray (1)
Human - One-color microarray (1)
Other (1)
Single nucleus RNA sequencing (1)
ChIP-seq (1)
DNA-seq (1)
Methylation profiling by array (1)
Observational patient registry (1)

Release Date

2025 (2337)
2022 (2144)
2023 (2027)
2021 (1709)
2024 (1681)
2020 (1383)
2019 (1058)
2018 (904)
2017 (700)
2016 (527)
2015 (434)
2026 (370)
2014 (366)
2013 (271)
2012 (203)
2011 (147)
2010 (128)
2009 (91)
2008 (44)
2007 (34)
2006 (23)
2003 (14)
2005 (13)
2001 (8)
2004 (7)
2002 (5)
2000 (4)
1999 (1)
1998 (1)

Location

India (11)
Australia (7)
China (6)
Iran (4)
United States (4)
Brazil (2)
Italy (2)
New Zealand (1)
United Kingdom (1)
Netherlands (1)
Spain (1)
France (1)
South Korea (1)

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Decoding Food Chemical Reactivity under Formulation Changes by Untargeted LC-HRMS/MS and Feature-Based Molecular Networking

Method applicability where the impact of formulation is investigated by replacing the wheat flour with an alternative flour, and assessing how this substitution is explained through untargeted approach, combined with the molecular network.

2026-09-18 | MTBLS13917 | MetaboLights

Novel alginate formulation for fecal microbiota transplantation: comparative and long-term stability evaluation

PRJEB98142 | ENA

Cryoprotectant formulation differentially shapes cardiac and immune transcriptomes in frozen storage

PRJNA1517364 | ENA

human gut metagenome

Pediatric FMT Formulation

PRJNA846614 | ENA

A Polysorbate-Based Lipid Nanoparticle Vaccine Formulation Induces In Vivo Immune Response Against SARS-CoV-2.

Not available

S-EPMC12030230 | biostudies-literature

Evaluating the Compatibility of New Recombinant Protein Antigens (Trivalent NRRV) with a Mock Pentavalent Combination Vaccine Containing Whole-Cell Pertussis: Analytical and Formulation Challenges.

Not available

S-EPMC11209613 | biostudies-literature

Physiologically Based Biopharmaceutics Modeling of Food Effect for Basmisanil: A Retrospective Case Study of the Utility for Formulation Bridging.

Not available

S-EPMC9862143 | biostudies-literature

Microbial diversity of Fermented formulation

PRJNA1194139 | ENA

Investigation of the Physico-Chemical Properties that Enable Co-Formulation of Basal Insulin Degludec with Fast-Acting Insulin Aspart.

Not available

S-EPMC4452210 | biostudies-literature

Impact of a multistrain probiotic formulation with high bifidobacterial

Impact of a multistrain probiotic formulation with high bifidobacterial content on the fecal bacterial community and short-chain fatty acid levels of healthy adults

PRJEB36929 | ENA