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TranscriptomicsTranscriptome profiling during interactions between food-spoilage-associated lactic acid bacteria: Leuconostoc gelidum, Lactococcus piscium and Lactobacillus oligofermentans
Mostly, lactic acid bacteria (LAB), including food-spoilage-associated, grow in communities consisting of several microbial species. The interspecies interactions eventually shape the structure and global activity of a given microbial community. Generally, the knowledge on system level responses of ...
ORGANISM(S): Leuconostoc gelidum subsp. gasicomitatum LMG 18811 + Lactobacillus oligofermentans LMG 22743 
2018-04-27 | E-MTAB-5499 | biostudies-arrayexpress
TranscriptomicsCross-laboratory validation of the OncoScan FFPE Assay, a multiplex tool for whole genome tumour profiling
162 FFPE samples, representing six different tumour types, were profiled in triplicate across three independent laboratories. OncoScan¬ FFPE assay data was then analysed for reproducibility of genome-wide copy number, loss of heterozygosity and somatic mutations.
ORGANISM(S): Homo sapiens 
2015-02-18 | E-MTAB-2914 | biostudies-arrayexpress
TranscriptomicsBiological Aging and Circadian Mechanisms in Murine Brown Adipose Tissue, Inguinal White Adipose Tissue, and Liver (Nov 2009 dataset)
The circadian profile of the transcriptomes in murine tissues was compared between groups of young and old male mice. The oscillatory phase and absolute expression levels were evaluated as a function of biological age. Distinct differences in multiple pathways were apparent based on biological and c...
ORGANISM(S): Mus musculus 
2012-03-15 | E-GEOD-25323 | biostudies-arrayexpress
TranscriptomicsBiological Aging and Circadian Mechanisms in Murine Brown Adipose Tissue, Inguinal White Adipose Tissue, and Liver (Jan 2010 dataset)
The circadian profile of the transcriptomes in murine tissues was compared between groups of young and old male mice. The oscillatory phase and absolute expression levels were evaluated as a function of biological age. Distinct differences in multiple pathways were apparent based on biological and c...
ORGANISM(S): Mus musculus 
2012-03-15 | E-GEOD-25324 | biostudies-arrayexpress
TranscriptomicsGene expression profiling of high (HAB) vs. low (LAB) anxiety-related behavior mice in seven brain regions.
Investigating the molecular basis and correlates of anxiety-related and depression-like behaviors, we generated a mouse model consisting of high (HAB) and low (LAB) anxiety-related behavior mice. We utilized the elevated plus-maze for testing the genetic predisposition to anxiety-related behavior an...
ORGANISM(S): Mus musculus 
2011-08-29 | E-GEOD-28999 | biostudies-arrayexpress
UnknownGut microbiota in very early systemic sclerosis: the first case-control taxonomic and functional characterisation highlighting an altered butyric acid profile.
Not available
S-EPMC11574430 | biostudies-literature
UnknownThe Potential of Plant-Based Lifestyle Interventions to Reduce the Burden of Disease in a Multi-Crisis Era.
Not available
S-EPMC12851919 | biostudies-literature
TranscriptomicsPedigreed Primate Embryonic Stem Cells Express Homogeneous Familial Gene Profiles
Pedigreed primate ESCs display homogeneous and reliable expression profiles. These similarities to mouse ESCs suggest that heterogeneities found among hESCs result from their disparate origins rather than intrinsic biological limitations with primate embryonic stem cells. Keywords: different nhpESC ...
ORGANISM(S): Macaca mulatta 
2008-04-14 | E-GEOD-7534 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of human HUVEC T-cell (CD40L+) induced, anti-CD40-siRNA treated
The CD40-CD40L dyad seems to play a prominent role fostering the immune-inflammatory response triggered by endothelial cell (EC)-T cell interaction. To comprehensively delineate the involvement of CD40 (TNFRSF5) in EC activation, we combined RNAi-mediated CD40 knock-down with comparative genome-wide...
ORGANISM(S): Homo sapiens 
2009-02-21 | E-GEOD-10601 | biostudies-arrayexpress
TranscriptomicsMicroarray transcriptional analysis of leptin signaling knockdown and rescue in 72-hour post fertilization zebrafish
The effects of leptin-A morpholino oligonucleotides and recombinant leptin-A on embryonic zebrafish transcriptome content were evaluated using Affymetrix 1.1 ST gene array strips.
ORGANISM(S): Danio rerio 
2018-04-02 | E-MTAB-6548 | biostudies-arrayexpress
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