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TranscriptomicsComparisons of gene expressions in zebrafish (Danio rerio) brain and gill after cold acclimation
Ambient temperature affects organisms comprehensively, however cold responses are different among tissues. Here, we adopt a transcript screening approach to explore and compare the cold responses in zebrafish gills and brain. Zebrafish were exposed to cold and the oligonucleotide-based microarray wa...
ORGANISM(S): Danio rerio 
2016-07-01 | E-GEOD-10958 | biostudies-arrayexpress
MetabolomicsChromosome‐level genome of Camellia lanceoleosa provides a valuable resource for understanding genome evolution and self‐incompatibility

The section Oleifera (Theaceae) has attracted attention for the high levels of unsaturated fatty acids found in its seeds. Here, we report the chromosome-scale genome of the sect. Oleifera using diploid wild Camellia lanceoleosa with a final size of 3.00 Gb and an N50 s...

2022-07-14 | MTBLS3769 | MetaboLights
UnknownAn RNA transmethylation pathway governs kidney nephrogenic potential.
Not available
S-EPMC12120073 | biostudies-literature
TranscriptomicsInhibitory effects of galacturonic acid on Saccharomyces cerevisiae: involvement of hexose transporters
Aim: Analyse inhibitory effects of galacturonic acid, an important constituent of plant biomass hydrolysates, on growing and starving cultures of Saccharomyces cerevisiae CEN.PK113-7D. Method & Results: Biomass yields in aerobic and anaerobic glucose-limited chemostat cultures (pH 3.5) were reduce...
ORGANISM(S): Saccharomyces cerevisiae 
2015-04-14 | E-GEOD-43474 | biostudies-arrayexpress
TranscriptomicsTranscriptional analysis of late ripening stages of grapevine berry
Background: The composition of grapevine berry at harvest is a major determinant of wine quality. Optimal oenological maturity of berries is characterized by a high sugar/acidity ratio, high anthocyanin content in the skin, and low astringency. However, harvest time is still mostly determined empiri...
ORGANISM(S): Vitis vinifera 
2011-11-08 | E-MTAB-481 | biostudies-arrayexpress
UnknownEngineering potent chimeric antigen receptor T cells by programming signaling during T-cell activation.
Not available
S-EPMC11392953 | biostudies-literature
TranscriptomicsSerial gene expression analysis in locally advanced breast cancer patients who failed to respond to neoadjuvant chemotherapy
To elucidate candidate genes and pathways associated with poor response, we retrospectively analyzed gene expression profiles in serial biopsies from women with locally advanced breast cancer who failed to respond to anthracycline-based chemo followed by taxane in the I-SPY Of the 221 patients who c...
ORGANISM(S): Homo sapiens 
2015-06-12 | E-GEOD-32603 | biostudies-arrayexpress
TranscriptomicsMammalian PERIOD complex regulates repair of DSB in active chromatin through anchoring to the nuclear envelope
Repair of DNA Double Strand Breaks produced in transcriptionally active chromatin occurs through a mechanism, Transcription-Coupled DSB repair (TC-DSBR), that is yet poorly characterized. Here, using a screening approach scoring multiple outputs in human cells, we identified the PER complex, a key m...
ORGANISM(S): Homo sapiens 
2025-11-12 | E-MTAB-12712 | biostudies-arrayexpress
TranscriptomicsPlasmodium falciparum treated with cyclohexylamine
Transcriptional profiling of P. falciparum cultures treated with cyclohexylamine over time (18, 25 and 30 hours post invasion) A control experiment was also set up in which P. falciparum was not treated with cyclohexylamine, and samples were taken at 18, 25 and 30 h post invasion). Background Plasm...
ORGANISM(S): Plasmodium falciparum 
2010-04-19 | E-GEOD-18075 | biostudies-arrayexpress
TranscriptomicsGenome-wide gene expression analysis in mouse embryonic stem cells
Embryonic stem cells studies have generated a great interest due to their ability to form a wide variety of matured cells. However, there remains a poor understanding of mechanisms regulating the cell state of ESCs and of the genes they express during early differentiation. Gene expression analysis ...
ORGANISM(S): Mus musculus 
2010-11-17 | E-GEOD-25403 | biostudies-arrayexpress
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