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TranscriptomicsExpression data from mouse dissected dendrites
Using microdissected dendrites from primary cultures of hippocampal neurons of two mouse strains (C57BL/6 and Balb/c) and one rat strain (Sprague-Dawley), we investigate via microarrays, subcellular localization of mRNAs in dendrites of neurons to assay the evolutionary differences in subcellular de...
ORGANISM(S): Mus musculus 
2014-10-14 | E-GEOD-61082 | biostudies-arrayexpress
TranscriptomicsExpression data from rat dissected dendrites
Using microdissected dendrites from primary cultures of hippocampal neurons of two mouse strains (C57BL/6 and Balb/c) and one rat strain (Sprague-Dawley), we investigate via microarrays, subcellular localization of mRNAs in dendrites of neurons to assay the evolutionary differences in subcellular de...
ORGANISM(S): Rattus norvegicus 
2014-10-14 | E-GEOD-61083 | biostudies-arrayexpress
TranscriptomicsExpression data from Soma dissected from single-cell mouse Hippocampal neurons
To assess neuronal expression divergence between mice and rats, we used the Affymetrix array platform to assay the transcriptomes of micro-dissected individual soma and pool of dendrites of hippocampal neurons in dispersed primary cell cultures from rat and mouse. Using microdissected soma and den...
ORGANISM(S): Mus musculus 
2014-10-14 | E-GEOD-61084 | biostudies-arrayexpress
TranscriptomicsExpression data from Soma dissected from single-cell rat Hippocampal neurons
To assess neuronal expression divergence between mice and rats, we used the Affymetrix array platform to assay the transcriptomes of micro-dissected individual soma and pool of dendrites of hippocampal neurons in dispersed primary cell cultures from rat and mouse. Using microdissected soma and den...
ORGANISM(S): Rattus norvegicus 
2014-10-14 | E-GEOD-61085 | biostudies-arrayexpress
TranscriptomicsTranscriptome In Vivo Analysis (TIVA) of spatially defined single cells in intact live mouse and human brain tissue
Transcriptome profiling is an indispensable tool in advancing the understanding of single cell biology, but depends upon methods capable of isolating mRNA at the spatial resolution of a single cell. Current capture methods lack sufficient spatial resolution to isolate mRNA from individual in vivo re...
ORGANISM(S): Mus musculus 
2014-01-12 | E-GEOD-52525 | biostudies-arrayexpress
UnknownPhylogeography and resistome of pneumococcal meningitis in West Africa before and after vaccine introduction.
Not available
S-EPMC8477402 | biostudies-literature
TranscriptomicsExpression data from mouse adult and pups heart and hippocampal tissue.
To assess in order to assess potential disparities in gene expression due to developmental differences we performed a comparison between hippocampus and heart tissues from rat and mouse pup (one week old) and adult (10 week old) animals. Using heart and hippocampal tissue from mouse (C57BL/6) and r...
ORGANISM(S): Mus musculus 
2014-10-14 | E-GEOD-61086 | biostudies-arrayexpress
TranscriptomicsExpression data from rat adult and pups heart and hippocampal tissue.
To assess in order to assess potential disparities in gene expression due to developmental differences we performed a comparison between hippocampus and heart tissues from rat and mouse pup (one week old) and adult (10 week old) animals. Using heart and hippocampal tissue from mouse (C57BL/6) and r...
ORGANISM(S): Rattus norvegicus 
2014-10-14 | E-GEOD-61087 | biostudies-arrayexpress
TranscriptomicsDilution and amplification control study
Mouse adult female brainM-bM-^@M-^Ys cortex (C57BL/6, Charles River Laboratories, Inc.) was isolated and stored immediately at -80M-BM-0C. Subsequently, the mRNA (15M-BM-5g) was isolated using TRIzol Reagent and MicroFastTrack 2.0 Kit (Invitrogen). A Sample of 5M-BM-5g was assessed on Affymetrix Mou...
ORGANISM(S): Mus musculus 
2014-10-14 | E-GEOD-61081 | biostudies-arrayexpress
TranscriptomicsDeep sequencing reveals cell-type specific patterns of single cell transcriptome variation
We present high quality deep read-depth single cell RNA sequencing for 91 cells from five mouse tissues and 18 cells from two rat tissues, along with 30 control samples of bulk RNA diluted to single-cell levels. We find that transcriptomes differ globally across tissues with regard to the number of ...
ORGANISM(S): Mus musculus 
2015-05-21 | E-GEOD-56638 | biostudies-arrayexpress
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