Frank Lisa L - OmicsDI

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Transcriptomics (15)
Unknown (5)
Genomics (2)
Metabolomics (2)
Proteomics (1)

Organisms

Rattus norvegicus (5)
Homo sapiens (5)
Mus musculus (4)
Rattus rattus (2)
Drosophila melanogaster (1)

Repository

biostudies-arrayexpress (16)
MetaboLights (2)
EGA (1)
MassIVE (1)

Technology Type

Mass spectrometry (2)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (2)
Illumina HiSeq 2500 (1)
Illumina NovaSeq 6000 (1)
Illumina HiSeq 4000 (1)
Orbitrap Exploris 480 (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2006 (6)
2012 (3)
2013 (2)
2023 (2)
2021 (1)
2020 (1)
2017 (1)
2015 (1)
2005 (1)
2025 (1)

CHEBI ID

CHEBI:28931 (2)
CHEBI:17822 (2)
CHEBI:15611 (2)
CHEBI:26271 (2)
CHEBI:16856 (2)
CHEBI:15978 (2)
CHEBI:16040 (2)
CHEBI:22660 (2)
CHEBI:26986 (2)
CHEBI:16811 (2)
CHEBI:28300 (2)
CHEBI:16695 (2)
CHEBI:15698 (2)
CHEBI:1157 (2)
CHEBI:27592 (2)
CHEBI:17562 (2)
CHEBI:16750 (2)
CHEBI:15729 (2)
CHEBI:16977 (2)
CHEBI:24898 (2)
CHEBI:25017 (2)
CHEBI:15428 (2)
CHEBI:17148 (2)
CHEBI:16610 (2)
CHEBI:6650 (2)
CHEBI:28044 (2)
CHEBI:16865 (2)
CHEBI:17196 (2)
CHEBI:7916 (2)
CHEBI:16946 (2)

Metabolite Name

Nicotinamide adenine dinucleotide phosphate (NADP+) (1)
Beta-Nicotinamide adenine dinucleotide reduced (NADH) (1)
Beta-Nicotinamide adenine dinucleotide (NAD+) (1)
Adenosine 5'-triphosphate (5'-ATP) (1)
Inosine 5'-monophosphate (5'-IMP) (1)
Ketoleucine (4-Methyl-2-oxopentanoic acid) (1)
S-(5'-Adenosyl)-L-methionine (SAM) (1)
Adenosine 5'-monophosphate (5'-AMP) (1)
L-Glutathione reduced (1)
Homoserine betaine (1)
L-Glutathione oxidized (1)
L-(+)-Lactic acid (1)
Tryptamine (1)
Folic acid (1)
Ectoine (1)
4-amino-5-aminomethyl-2-methylpyrimidine (1)
4-aminobenzoic acid (1)
Adenosine 5'-monophosphate (1)
2'-deoxycytidine (1)
L-ornithine (1)
Glutathione (1)
Acetyl-CoA (1)
Pyruvic acid (1)
Taurine (1)
Sarcosine (1)
Guanosine (1)
Gamma-aminobutyric acid (1)
Cytosine (1)
Cytidine (1)
Cysteine (1)

Study type

Transcription profiling by array (10)
RNA-seq of coding RNA (3)
Genotyping by array (1)
ChIP-seq (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2006 (6)
2012 (3)
2021 (2)
2020 (2)
2013 (2)
2017 (1)
2015 (1)
2005 (1)
2022 (1)
2018 (1)
2014 (1)

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Large neutral amino acid levels tune perinatal neuronal excitability and survival

Surprisingly little is known about the critical metabolic changes that neural cells have to undergo during development and how even mild, temporary shifts in this program can influence brain circuitries and behavior. Inspired by the discovery that mutations in SLC7A5, a transporter of metabolically-...

2023-03-28 | MTBLS6578 | MetaboLights

Total and phosphoproteome analysis of effects of topoisomerase 1 and ATR inhibitors in small cell lung cancer nuclei

Total and phosphoproteome analysis of effects of topoisomerase 1 (SN-38) and ATR (M1774) inhibitors in small cell lung cancer. Experiments performed in nuclear extract. See MetaData for more information.

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2023-02-21 | MSV000091336 | MassIVE

Interaction of human osteoblast-like Saos-2 and MG-63 cells with thermally oxidized surfaces of a titanium-niobium alloy.

Not available

S-EPMC4076233 | biostudies-literature

Advancing Reef Monitoring Techniques through Exometabolomics: Quantification of Labile Dissolved Organic Metabolites on Coral Reefs

Extracellular chemical cues constitute much of the language of life among marine organisms from microbes to mammals. These chemical cues shape foraging and feeding strategies, symbiotic interactions, selection of mates and habitats, and the transfer of energy and nutrient...

2025-07-16 | MTBLS9008 | MetaboLights

Transcription profiling of lung from Dahl salt sensitive (SS) rats and SS11BN consomic rats during hypoxia treatment

Examination of gene expression changes during hypoxia of the Dahl salt sensative (SS) rat and SS11BN consomic rat. SS11BN rats are derived from introgression of chromosome 11 from Brown Norway (BN) rat into the SS genetic background.