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ProteomicsInsilico TOF top-down proteomics datasets generated using FTMS simulator (Spectroswiss)
This dataset consists of in silico generated TOF top-down proteomics spectra created using the FTMS simulator software (Spectroswiss). The simulated datasets are designed to evaluate FDR estimation in spectral deconvolution. Protein sequences were used to generate MS datasets with varying resolution...
ORGANISM(S): Homo sapiens (Human) 
2026-03-09 | PXD063631 | Pride
Ftms simulator In silico Human proteins Deconvolution Top-down proteomics Orbitrap 
ProteomicsIn silico Orbitrap top-down proteomics datasets generated using FTMS simulator (Spectroswiss)
This dataset consists of in silico generated Orbitrap top-down proteomics spectra created using the FTMS simulator software (Spectroswiss). The simulated datasets are designed to evaluate false discovery rate (FDR) estimation in spectral deconvolution workflows. Protein sequences were used to genera...
ORGANISM(S): Homo sapiens (Human) 
2026-03-09 | PXD063573 | Pride
Ftms simulator In silico Human proteins Deconvolution Top-down proteomics Orbitrap 
ProteomicsPROTEOGOLD: Generation of Reference MS/MS Datasets for Large Protein Using FTMS Simulation
Top- and middle-down (TD/MD) mass spectrometry is widely used to characterize proteins and biotherapeutics. These workflows routinely produce highly complex, information-dense spectra—overlapping isotopic patterns, multiple charge-state envelopes, and crowded product-ion populations—that increasingl...
ORGANISM(S): Bos taurus (Bovine) 
2026-05-22 | PXD075270 | Pride
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