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TranscriptomicsGene expression of the colonic epithelial cells in CRB mice fed with HFD and LFD
To elucidate the mechamisms of colonic Treg cell induction by microbial metabolite(s), chroloform-resistant bacteria (CRB)-associated mice was developed and given low-fiber diet (LFD) and high-fiber diet (HFD). The colonic epithelial cells were isolated and gene expression profiles were analyzed by ...
ORGANISM(S): Mus musculus 
2014-08-11 | E-GEOD-41104 | biostudies-arrayexpress
TranscriptomicsComparative transcriptomic analysis of BA- or BL-
This SuperSeries is composed of the following subset Series: GSE12997: Comparative transcriptomic analysis of BA- or BL- associated murine colonic epithelium GSE12998: Comparative transcriptomic analysis of BA- or BL- associated murine colonic epithelium after O157 infection Refer to individual Seri...
ORGANISM(S): Mus musculus 
2011-01-27 | E-GEOD-13061 | biostudies-arrayexpress
TranscriptomicsComparative transcriptomic analysis of BA- or BL- associated murine colonic epithelium
A huge number of microorganisms are colonized in human gut and the balance of their composition is closely related to human health. Recently, many probiotics such as bifidobacteria or lactobacilli have been introduced in our life as effective agents. However, we have not well understood their benefi...
ORGANISM(S): Mus musculus 
2011-01-27 | E-GEOD-12997 | biostudies-arrayexpress
TranscriptomicsComparative transcriptomic analysis of BA- or BL- associated murine colonic epithelium after O157 infection
A huge number of microorganisms are colonized in human gut and the balance of their composition is closely related to human health. Recently, many probiotics such as bifidobacteria or lactobacilli have been introduced in our life as effective agents. However, we have not well understood their benefi...
ORGANISM(S): Mus musculus 
2011-01-27 | E-GEOD-12998 | biostudies-arrayexpress
TranscriptomicsTranscription profiling by array of colonic epithelial cells from mice starved, subsequently refed with or without antibiotics metronidazol and vancomycin
Oral food intake maintains gastrointestinal cell turnover and impacts the morphology and function of intestinal epithelial cells. However, the underlying mechanism is not fully elucidated, especially in the large intestine. Therefore, we analyzed the colonic epithelial cell turnover in starved and r...
ORGANISM(S): Mus musculus 
2014-08-11 | E-GEOD-40370 | biostudies-arrayexpress
TranscriptomicsA novel metabolic monitoring system identified nutrition-mediated microbial interactions
"Omics" technologies have been developed to understand the whole complex microbial systems; however, most omics studies reported so far were utilized to analyze the living matters of “single-species”. To understand the cell-cell interaction in the gut microbial complex, we selected to exam...
ORGANISM(S): Escherichia coli 
2011-09-30 | E-GEOD-18474 | biostudies-arrayexpress
TranscriptomicsEffect of VEGF on expressions of C2H2 zinc finger proteins in human umbilical vein endothelial cells.
Angiogenic homeostasis is maintained by a balance between vascular endothelial growth factor (VEGF) and Notch signalling in endothelial cells (ECs). We screened for molecules that might mediate the coupling of VEGF signal transduction with down-regulation of Notch signalling, and identified B-cell c...
ORGANISM(S): Homo sapiens 
2012-03-25 | E-GEOD-35171 | biostudies-arrayexpress
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