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Unknown (452)
Transcriptomics (200)
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Homo sapiens (157)
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biostudies-arrayexpress (217)
pride (15)
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Illumina HiSeq 2000, ILLUMINA (1)
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Instrument Platform

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Centrifuge (4 °C); ice/cold block (1)
Tissue Homogenizer (required to process mucosal tissue for the miRNeasy kit). Refrigerated Centrifuge (4 °C) (required for the miRNeasy protocol). (1)
Illumina Hi-Seq 2000 (1)
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NextSeq 2000 (1)
Illumina MiSeq (1)
Instrument (1)
7890A GC (Agilent, Santa Clara, CA, USA) instrument coupled to a 5975C MSD single quadrupole mass spectrometer (Agilent).Dionex Ultimate 3000 (Thermo Scientific) coupled to TSQ Quantum Ultra mass spectrometer (Thermo Scientific) (1)
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Publication Date

2014 (29)
2010 (26)
2013 (25)
2015 (22)
2012 (19)
2011 (17)
2016 (16)
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2025 (12)
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2009 (8)
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2020 (4)
2018 (3)
2017 (3)
2023 (3)
2005 (2)
2019 (2)
2006 (1)
2002 (1)

CHEBI ID

CHEBI:16335 (3)
CHEBI:15676 (2)
CHEBI:15698 (2)
CHEBI:16450 (2)
CHEBI:16556 (2)
CHEBI:16668 (2)
CHEBI:16750 (2)
CHEBI:16811 (2)
CHEBI:17012 (2)
CHEBI:17200 (2)
CHEBI:17256 (2)
CHEBI:17596 (2)
CHEBI:17797 (2)
CHEBI:17822 (2)
CHEBI:18012 (2)
CHEBI:18066 (2)
CHEBI:22653 (2)
CHEBI:22660 (2)
CHEBI:24266 (2)
CHEBI:24298 (2)
CHEBI:26271 (2)
CHEBI:28044 (2)
CHEBI:30769 (2)
CHEBI:30887 (2)
CHEBI:30915 (2)
CHEBI:32816 (2)
CHEBI:43355 (2)
CHEBI:49033 (2)
CHEBI:6650 (2)
CHEBI:68616 (2)

Metabolite Name

Adenosine (5)
Jasmonic acid (5)
5-Aminopentanoic acid (3)
5-Hydroxyindoleacetate (3)
Allantoin (3)
Creatine (3)
Creatinine (3)
Guanine (3)
Hypoxanthine (3)
Inosine (3)
L-Tyrosine (3)
Lumichrome (3)
Melibiose (3)
Pyridoxal (3)
Strictosidine (3)
Taurodeoxycholic acid (3)
Uracil (3)
Xanthine (3)
(+)-cis-abscisic aldehyde (2)
(S)-9-Hydroxy-10-undecenoic acid (2)
1-Naphthylamine (2)
1-methylhistamine (2)
11-Hydroxy-9-tridecenoic acid (2)
2'-O-methylinosine (2)
2'-deoxycytidine (2)
2'-deoxyinosine (2)
3-(2-Hydroxyphenyl)propanoic acid (2)
3-(3,4,5-Trimethoxyphenyl)propanoic acid (2)
3-Hydroxyglutaric acid (2)
3-Oxododecanoic acid (2)

Modification

4x(15)N labeled L-arginine (1)

Study type

Transcription profiling by array (138)
RNA-seq of coding RNA (35)
ChIP-seq (12)
Comparative genomic hybridization by array (5)
Unknown experiment type (3)
Other (3)
Methylation profiling by array (3)
MicroRNA profiling by array (2)
DNA-seq (2)
RNA-seq of coding RNA from single cells (2)
Methylation profiling by high throughput sequencing (2)
RNA-seq of non coding RNA (2)
ChIP-chip by tiling array (1)
Cell line - High-throughput sequencing (1)
Transcription profiling by tiling array (1)
RNAi profiling by array (1)
Genotyping by array (1)
Transcription profiling by RT-PCR (1)
Ribo-seq (1)

Release Date

2021 (55)
2022 (53)
2020 (53)
2014 (46)
2024 (41)
2015 (40)
2013 (38)
2010 (35)
2025 (34)
2016 (33)
2018 (32)
2023 (31)
2011 (30)
2019 (30)
2017 (29)
2012 (27)
2008 (17)
2026 (15)
2009 (15)
2007 (6)
2006 (4)
2005 (2)
2002 (1)
2003 (1)
1998 (1)

Lab affiliation

Forschungszentrum Juelich GmbH ZEA-3 Analytics Wilhelm-Johnen-Str D-52425 Juelich Germany (2)
Bavarian Center for Biomolecular Mass Spectrometry (BayBioMS) Technische Universität München (TUM) Gregor-Mendel-Straße 4 85354 Freising GERMANY (1)
Department of Cancer Biology, University of Cincinnati College of Medicine (1)
Department of Chemistry, Umeå University, Umeå, Sweden (1)
Dept of Chemistry, Umeå University, Umeå, Sweden. (1)
Exploring the Dynamics of Proteomes laboratory; UGA/CEA/Inserm U1038 CEA/Grenoble 17 Avenue des Martyrs F-38054 Grenoble (1)
Hubrecht Institute-KNAW & University Medical Center Utrecht, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands. (1)
Laboratory of Cell and Developmental Signaling, National Cancer Institute, National Institutes of Health, Frederick, MD 21702, USA (1)
Max Planck Institute for Biology of Ageing, Cologne, Germany. Institute of Healthy Ageing, and Department of Genetics, Evolution and Environment, UCL, London, UK. (1)
Molecular Proteomics Laboratory, Biomedical Research Center (BMFZ), Heinrich Heine University, Medical Faculty, Düsseldorf, Germany (1)
Pitter Huesgen Forschungszentrum Juelich ZEA-3 Analytics (1)
The International Institute of Molecular Mechanisms and Machines, Polish Academy of Sciences (1)
Umea University, Department of Chemistry, 90187 Umea, Sweden (1)
ZEA-3 Analytics, Forschugnszentrum Jülich (1)

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Expression data from Balb/c mice kidney samples

Males are 50% more likely to develop end stage kidney failure compared to women. As a model of the human condition we analyzed gene expression changes in healthy and diseased mouse kidneys. Interestingly, the set of gender biased genes in healthy kidneys were different from those in diseased kidneys...

ORGANISM(S): Mus musculus

2010-03-03 | E-GEOD-12683 | biostudies-arrayexpress

The Effect of Expert Performance Microtiming on Listeners' Experience of Groove in Swing or Funk Music.

Not available

S-EPMC5050221 | biostudies-literature

Rational Design of [13 C,D14 ]Tert-butylbenzene as a Scaffold Structure for Designing Long-lived Hyperpolarized 13 C Probes.

Not available

S-EPMC6820848 | biostudies-literature

A Straightforward Approach to Synthesize 7-Aminocephalosporanic Acid In Vivo in the Cephalosporin C Producer Acremonium chrysogenum.

Not available

S-EPMC9144927 | biostudies-literature

Genome-wide analysis of parental and wild-type SK-N-Be(2)C neuroblastoma cell lines as well as those co-treated with the histone deacetylase inhibitor SAHA

Analysis of varied biologic pathways in neuroblastoma SK-N-Be(2)C cells grown in doxorubicin and/or SAHA. We hypothesized that SK-N-Be(2)C cells undergo a mesenchymal change through mesenchymal change resulting in a more invasive as well as drug resistant phenotype, and that the mechanism of SAHAs e...

ORGANISM(S): Homo sapiens

2016-05-31 | E-GEOD-47669 | biostudies-arrayexpress

Transcription profiling of human Ewing sarcoma (A673) cells treated with cytarabine, doxorubicin and puromycin oral tongue squamous cell carcinomas to identify novel potential prognosticators

An increasing number of cancer-associated mutations have been identified. Unfortunately, little therapy today exploits these tumor-specific genetic lesions. Often, the resulting oncoproteins have been intractable to easy manipulation with current small molecule screening approaches. To overcome this...

ORGANISM(S): Homo sapiens

2008-11-22 | E-GEOD-6930 | biostudies-arrayexpress

New tricks for the glycyl radical enzyme family.

Not available

S-EPMC5911432 | biostudies-literature

The dynamics of cortical neuronal activity in the first minutes after spontaneous awakening in rats and mice.

Not available

S-EPMC4096203 | biostudies-literature

Plasmids for C-terminal tagging in Saccharomyces cerevisiae that contain improved GFP proteins, Envy and Ivy.

Not available

S-EPMC4390471 | biostudies-literature

AP-1 regulates cyclin D1 and c-MYC transcription in an AKT-dependent manner in response to mTOR inhibition: role of AIP4/Itch-mediated JUNB degradation.