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TranscriptomicsBacillus subtilis CU1065: fur vs fur fsrA, fur vs fur fbpAB, fur vs fur fbpC, and fur vs fur fbpABC
Global transcriptional profiling of Bacillus subtilis cells comparing fur mutant to mutants of the iron-sparing response: fur fsrA double mutant, fur fbpAB triple mutant, fur fbpC double mutant, and fur fbpABC quadruple mutant fur vs fur fsrA (fsrA), fur vs fur fbpAB (AB), fur vs fur fbpC (C), and ...
ORGANISM(S): Bacillus subtilis 
2011-02-19 | E-GEOD-27416 | biostudies-arrayexpress
TranscriptomicsFur mutant analysis
Wildtype G27 and it's Fur mutant derivative were exposed to pH 5.0 for the indicated length of time. Bacterial cells in the exponential phase of growth (denoted log) and stationary phase of growth were used. fur1 denotes a single fur mutant while fur2 denotes an additional fur mutant. An all pairs...
ORGANISM(S): Helicobacter pylori 
2006-02-02 | E-GEOD-4160 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of E. coli wild type and Fur mutant strains ectopically expressing RyhB to investigate global iron use
RyhB is a non-coding RNA regulated by the Fur repressor. It has previously been shown to cause the rapid degradation of a number of mRNAs that encode proteins that utilize iron. Here we examine the effect of ectopic RyhB production on global gene expression by microarray analysis. Many of the pre...
ORGANISM(S): Escherichia coli 
2007-09-21 | E-GEOD-3105 | biostudies-arrayexpress
TranscriptomicsPorphyromonas gingivalis 33277 wild-type vs Fur orthologue Har isogenic mutant ECR455
Porphyromonas gingivalis is a major pathogen associated with the microbial biofilm-mediated disease chronic periodontitis. P. gingivalis has an obligate requirement for iron and protoporphyrin IX which it satisfies by transporting heme and iron liberated from the human host. The level of cellular ir...
ORGANISM(S): Porphyromonas gingivalis ATCC 33277 
2015-04-01 | E-GEOD-37099 | biostudies-arrayexpress
ProteomicsPalaeoproteomics identifies beaver fur and fur trade in Danish high-status Viking Age burials
Fur is known from contemporary written sources to have been a key commodity in the Viking Age. Nevertheless, the fur trade has been notoriously difficult to study archaeologically as fur rarely survives in the archaeological record. In Denmark, fur finds are rare and fur in clothing has been limited...
ORGANISM(S): Sciuridae Mustela sp. Ovis aries Castor 
2022-06-07 | PXD030529 | Pride
Viking age Fur trade Palaeoproteomics Animal fur Ancient dna Peptide mass fingerprinting Clothing Species identification Keratin Lc-ms/ms 
TranscriptomicsTranscription profiling of H. pylori wild type G27 and Fur mutant derivative exposed to pH 5.0
Wildtype G27 and it's Fur mutant derivative were exposed to pH 5.0 for the indicated length of time. Bacterial cells in the exponential phase of growth (denoted log) and stationary phase of growth were used. fur1 denotes a single fur mutant while fur2 denotes an additional fur mutant.
ORGANISM(S): Helicobacter pylori 
2006-06-06 | E-SMDB-3498 | biostudies-arrayexpress
TranscriptomicsDifferential RNA-sequencing of Campylobacter jejuni fur perR mutant
We report the use of differential RNA-sequencing for the determination of the primary transcriptome of the fur perR mutant of Campylobacter jejuni NCTC 11168. This allows for the genome-wide determination of transcription start sites. Campylobacter jejuni NCTC 11168 fur perR mutant was grown to late...
ORGANISM(S): Campylobacter jejuni 
2014-07-01 | E-GEOD-49660 | biostudies-arrayexpress
GenomicsDeciphering the Fur transcriptional regulatory network highlights its complex role beyond iron metabolism in Escherichia coli [ChIP-Seq]
The ferric uptake regulator (Fur) plays a critical role in the transcriptional regulation of iron metabolism in many bacteria. However, the full regulatory potential of Fur beyond iron metabolism remains undefined. Here, we comprehensively reconstructed the Fur transcriptional regulatory network in ...
ORGANISM(S): Escherichia coli str. K-12 substr. MG1655 
2014-09-09 | E-GEOD-54899 | biostudies-arrayexpress
ProteomicsFree rather than total iron content is critically linked to the Fur physiology in Shewanella oneidensis
Ferric uptake regulator (Fur) is a transcriptional regulator playing a central role in iron homeostasis of many bacteria and Fur inactivation commonly results in pleiotropic phenotypes. In Shewanella oneidensis, a representative of dissimilatory metal-reducing -proteobacteria capable of respiring a...
ORGANISM(S): Shewanella Oneidensis Mr-1 
PXD021732 |
TranscriptomicsTranscriptomic analysis of Vibrio vulnificus in response to iron concentration and Fur protein
V. vulnificus is a marine bacteria that causes diseases in both mammals and fish. In both hosts, the iron concentration represents a key factor that greatly influences the virulence of this bacterium. To further define the gene repertoire that is regulated by iron concentration and Fur protein (the ...
ORGANISM(S): Vibrio vulnificus 
2014-12-20 | E-GEOD-60553 | biostudies-arrayexpress
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