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TranscriptomicsMR-1 nitrate sample to fumarate sample
One of the most striking observations in the S. oneidensis genome regarding nitrate respiration is that napC is missing and nrfBCD is degenerated. To gain insights into candidate genes encoding the protein(s) in place of NapC and NrfBCD function, i.e., delivering electrons to NapA and NrfA, transcri...
ORGANISM(S): Shewanella oneidensis MR-1 
2010-05-19 | E-GEOD-11198 | biostudies-arrayexpress
TranscriptomicsGenomic Array Footprinting of Shewanella oneidensis grown under aerobic conditions
We undertook a genomic array footprinting to identify genes important for aerobic growth of S. oneidensis. The data revealed that removal of 96 genes resulted in significant impacts on aerobic growth. Experimental cells collected 5 days after competition started; Control cells collected 1 day after ...
ORGANISM(S): Shewanella oneidensis 
2013-12-31 | E-GEOD-42479 | biostudies-arrayexpress
ProteomicsFree rather than total iron content is critically linked to the Fur physiology in Shewanella oneidensis
Ferric uptake regulator (Fur) is a transcriptional regulator playing a central role in iron homeostasis of many bacteria and Fur inactivation commonly results in pleiotropic phenotypes. In Shewanella oneidensis, a representative of dissimilatory metal-reducing -proteobacteria capable of respiring a...
ORGANISM(S): Shewanella Oneidensis Mr-1 
2020-09-29 | PXD021732 |
UnknownProbing regulon of ArcA in Shewanella oneidensis MR-1 by integrated genomic analyses.
Not available
S-EPMC2262068 | biostudies-literature
TranscriptomicsPellicle formation of MR-1
Shewanella oneidensis is an important model organism for bioremediation studies because of its diverse respiratory capabilities. In recent years, biofilm development of S. oneidensis has been extensively studied because it is essential to reduce solid metals. As a special form of biofilm, however, p...
ORGANISM(S): Shewanella oneidensis MR-1 
2010-09-01 | E-GEOD-14331 | biostudies-arrayexpress
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