Garcia-Garcia Mar M

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Unknown (2788)
Metabolomics (14)
Transcriptomics (8)
Proteomics (6)
Models (2)

Organisms

Homo sapiens (8)
Schizophyllum commune H4-8 (6)
Mycobacterium tuberculosis SP7 (6)
Salmonella enterica subsp. enterica serovar Typhimurium str. T000240 (6)
Oryza sativa Japonica Group (6)
Rabbit calicivirus (6)
Crotalus durissus terrificus (6)
Eriocheir sinensis (6)
Candidatus Endoriftia persephonae (6)
Mycobacterium tuberculosis SP10 (6)
Mycobacterium tuberculosis SP13 (6)
Cotesia typhae (6)
Mycobacterium tuberculosis SP22 (6)
Cepaea nemoralis (6)
Geobacillus kaustophilus HTA426 (6)
Enterobacter ludwigii (6)
Trichoderma asperellum CBS 433.97 (6)
Corynebacterium diphtheriae bv. mitis str. ISS 3319 (6)
Nakaseomyces glabratus (6)
Olea europaea (6)
Mumps virus strain Enders (6)
Chlamydomonas reinhardtii (6)
Deinococcus deserti VCD115 (6)
Lama (6)
Planorbella pilsbryi (6)
Paradendryphiella salina (6)
Wolbachia sp. wMelPop (6)
Pyricularia oryzae P131 (6)
Lactococcus garvieae (1)
Bordetella pertussis (1)

Repository

MetaboLights (14)
biostudies-arrayexpress (8)
pride (6)
BioModels (2)

Tissue

Epithelial cell (2)
Bone (1)
Peripheral blood mononuclear cell (1)
HeLa cell (1)
Permanent cell line cell (1)

Disease

Lymphoid leukemia (2)
Breast cancer (1)
COVID-19 (1)
Cervix carcinoma (1)
Influenza (1)

Technology Type

Mass spectrometry (11)
Mass Spectrometry (6)
Shotgun proteomics (5)
NMR spectroscopy (3)
Data-dependent acquisition (1)
Affinity purification coupled with mass spectrometry proteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (8)
Liquid Chromatography MS - negative - reverse phase (4)
Bruker (2)
Scanning hardware (1)
Direct infusion MS - Positive (1)
Direct infusion MS - Negative (1)
6550 Q-TOF LC-MS Agilent (1)
LTQ Orbitrap XL (Thermo Scientific) (1)
Matrix-assisted laser desorption-ionisation imaging MS - (1)
Nuclear Magnetic Resonance (NMR) - (1)

Publication Date

2010 (4)
2023 (4)
2022 (4)
2017 (3)
2024 (2)
2009 (2)
2021 (2)
2019 (2)
2025 (1)
2006 (1)
2020 (1)
2018 (1)
2026 (1)
2016 (1)
2015 (1)

CHEBI ID

CHEBI:16737 (5)
CHEBI:16919 (5)
CHEBI:20067 (4)
CHEBI:17196 (4)
CHEBI:17895 (4)
CHEBI:17750 (4)
CHEBI:15354 (4)
CHEBI:30769 (4)
CHEBI:89843 (3)
CHEBI:15366 (3)
CHEBI:68616 (3)
CHEBI:36281 (3)
CHEBI:15603 (3)
CHEBI:4676 (3)
CHEBI:16704 (3)
CHEBI:18132 (3)
CHEBI:32805 (3)
CHEBI:17445 (3)
CHEBI:17620 (3)
CHEBI:28865 (3)
CHEBI:17650 (3)
CHEBI:17405 (3)
CHEBI:1879 (3)
CHEBI:17561 (3)
CHEBI:15971 (3)
CHEBI:17203 (3)
CHEBI:16414 (3)
CHEBI:57589 (3)
CHEBI:17191 (3)
CHEBI:18019 (3)

Metabolite Name

Creatine (4)
Creatinine (4)
Cholic acid (2)
Phytuberin (2)
Acetate (2)
Valine (2)
Mannose (2)
Dimethylamine (2)
Zingerone (2)
3-Hydroxybutyrate (2)
Taurine (2)
Isoleucine (2)
Glycerophosphocholine (2)
Betaine (2)
Tyrosol (2)
L-Histidine (2)
L-Asparagine (2)
Citric acid (2)
Lactate (2)
Glutamate (2)
Alanine (2)
Uridine (2)
Choline (2)
L-Lysine (2)
L-Proline (2)
L-Valine (2)
NCGC00168953-02_C47H76O17_(3beta,5xi,9xi,22beta)-22,24-Dihydroxyolean-12-en-3-yl 6-deoxy-alpha-L-mannopyranosyl-(1->2)-alpha-L-arabinopyranosyl-(1->2)-beta-D-glucopyranosiduronic acid (1)
Sodium taurochenodeoxycholate (1)
(R)-4-((3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-3,7,12-trihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)
(R)-4-((3R,4R,5S,8S,9S,10R,13R,14S,17R)-3,4-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)

IsPrivate

False (2)

Submitter Keywords

Immuno-oncology (2)

Modelling Approach

Ordinary differential equation model (2)

Study type

Comparative genomic hybridization by array (5)
Transcription profiling by array (2)
ChIP-chip by tiling array (1)

Release Date

2022 (427)
2023 (364)
2025 (348)
2021 (338)
2024 (280)
2020 (188)
2018 (138)
2019 (135)
2017 (119)
2015 (92)
2016 (85)
2014 (58)
2026 (50)
2012 (46)
2010 (31)
2013 (30)
2011 (24)
2009 (22)
2007 (5)
2008 (4)
2006 (3)
2005 (3)
2004 (3)
2003 (2)
1999 (1)

Lab affiliation

ECRC, IGMM, University of Edinburgh (1)
Proteome Dynamics, Max Delbruck Center for Molecular Medicine, Germany (1)
Department of Human Evolution, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany (1)
systems biology Ireland, UCD (1)
Spanishg National Center for Cardiovascular Research (CNIC), Madrid, Spain. (1)
Epigenetics Program, Department of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania (1)

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CGH profiles of primary breast carcinomas from HBOC (Hereditary Breast and Ovarian Cancer) families

89 tumors from women that were eligible for, and subjected to, routine diagnostic testing according to the HBOC criteria but were negative for pathogenic BRCA1/2-mutations or carried an UV in either BRCA1/2 A BRCA2-classifier was built using array-CGH profiles of 28 BRCA2-mutated and 28 sporadic bre...

ORGANISM(S): Homo sapiens

2010-07-05 | E-GEOD-22481 | biostudies-arrayexpress

Untargeted lipidomic profiling of grape highlights the importance of modified lipid species beyond the traditional compound classes

The aim of this paper is to provide a detailed characterisation of grape lipidome. To achieve this objective, it starts by describing a pipeline implemented in R software to allow the semi-automatic annotation of the detected lipid species. It also provides an extensive description of the differe...

2023-01-02 | MTBLS5261 | MetaboLights

Quantifying histone PTMs by bottom-up MS

Histone post-translational modifications (PTMs) contribute to chromatin function through their chemical properties which influence chromatin structure, and their ability to recruit chromatin interacting proteins. Nanoflow liquid chromatography coupled with high resolution tandem mass spectrometry (n...

ORGANISM(S): Homo sapiens (Human)

2015-03-27 | PXD001541 | Pride