Ge Sun S - OmicsDI

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Unknown (1362)
Transcriptomics (66)
Proteomics (60)
Metabolomics (9)
Genomics (5)

Organisms

Homo sapiens (40)
Mus musculus (29)
Streptococcus pneumoniae D39 (4)
Staphylococcus aureus subsp. aureus NCTC 8325 (3)
Rattus norvegicus (3)
Gallus gallus (3)
Staphylococcus aureus (3)
Neurospora crassa (2)
Danio rerio (2)
Saccharomyces cerevisiae (2)
Arabidopsis thaliana (2)
Tardigrada (2)
Bienertia sinuspersici (2)
Canis lupus familiaris (2)
Triticum aestivum (2)
Pinus taeda (1)
Nicotiana attenuata (1)
Aspergillus flavus (1)
Rana pirica (1)
Populus tremuloides (1)
Aggregatibacter actinomycetemcomitans (1)
Bos indicus (1)
Actinobacillus pleuropneumoniae (1)
Apis mellifera (1)
Vitis vinifera (1)
Mycobacterium tuberculosis (1)
Pseudomonas aeruginosa PAO1 (1)
Drosophila melanogaster (1)
Mycolicibacterium smegmatis MC2 155 (1)
Amphiroa fragilissima (1)

Repository

biostudies-arrayexpress (71)
pride (38)
iProX (18)
MetaboLights (7)
MassIVE (4)
GNPS (2)

Tissue

Cell culture (7)
Brain (4)
Leaf (4)
Liver (4)
Whole body (4)
Adipose tissue (3)
Blood plasma (3)
Heart (3)
Kidney (3)
Plant cell (3)
Spleen (3)
Large intestine (2)
Lung (2)
Muscle (2)
Oocyte (2)
Pancreas (2)
Photosynthetic cell (2)
Root (2)
Seed (2)
Skin (2)
Small intestine (2)
Stomach (2)
Bacterial protein (1)
Embryo (1)
Flag leaf (1)
Neutrophil (1)
Permanent cell line cell (1)
T cell (1)
Urine (1)
Venom (1)

Disease

Endometrioid carcinoma (1)
Coronavirus infectious disease (1)
Disease free (1)
Liver cirrhosis (1)
Myocardial ischemia (1)

Technology Type

Mass Spectrometry (38)
Shotgun proteomics (21)
Mass spectrometry (7)
SWATH MS (4)
Affinity purification coupled with mass spectrometry proteomics (2)
All-ion fragmentation (2)
Bottom-up proteomics (2)
Gel-based experiment (2)
Top-down proteomics (2)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Data-dependent acquisition (1)
Data-independent acquisition (1)
DiaPASEF (1)
Mass spectrometry imaging (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (4)
Liquid Chromatography MS - positive - reverse phase (4)
Q Exactive HF (2)
TripleTOF 6600 (2)
NextSeq 500 (1)
Orbitrap Fusion (1)
Q Exactive (1)
Agilent 7890A+LECO Chroma TOF PEGASUS HT (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - negative - HILIC (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - HILIC (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2011 (15)
2010 (12)
2022 (12)
2015 (11)
2013 (10)
2021 (10)
2025 (10)
2023 (8)
2020 (8)
2012 (7)
2016 (6)
2014 (6)
2019 (6)
2026 (5)
2024 (5)
2018 (3)
2009 (2)
2007 (1)
2006 (1)
2005 (1)
2017 (1)

CHEBI ID

CHEBI:30769 (4)
CHEBI:15354 (3)
CHEBI:15741 (3)
CHEBI:15756 (3)
CHEBI:16708 (3)
CHEBI:17351 (3)
CHEBI:17521 (3)
CHEBI:17597 (3)
CHEBI:18012 (3)
CHEBI:6650 (3)
CHEBI:10782 (2)
CHEBI:143235 (2)
CHEBI:15428 (2)
CHEBI:15702 (2)
CHEBI:15793 (2)
CHEBI:16119 (2)
CHEBI:16335 (2)
CHEBI:16449 (2)
CHEBI:16704 (2)
CHEBI:16828 (2)
CHEBI:17234 (2)
CHEBI:17268 (2)
CHEBI:17295 (2)
CHEBI:17345 (2)
CHEBI:17368 (2)
CHEBI:17716 (2)
CHEBI:17748 (2)
CHEBI:17895 (2)
CHEBI:18183 (2)
CHEBI:18237 (2)

Metabolite Name

Adenine (3)
Citric acid (3)
4-Hydroxybenzaldehyde (2)
Adenosine (2)
Butylparaben (2)
Choline (2)
Fumaric acid (2)
Hypoxanthine (2)
Lactose (2)
Linoleic acid (2)
Palmitic acid (2)
Pyroglutamic acid (2)
Succinic acid (2)
Terephthalic acid (2)
Thymidine (2)
Trehalose (2)
Uric acid (2)
Uridine (2)
(+)-Pinoresinol (1)
(+/-)12(13)-dihome (1)
(+/-)9(10)-epome (1)
(+/-)9,10-dihydroxy-12z-octadecenoic acid (1)
(+/-)9-hpode (1)
(15z)-9,12,13-trihydroxy-15-octadecenoic acid (1)
(1S,2S,8xi,9beta,16alpha,17xi)-1-(beta-D-Glucopyranosyloxy)-2,16,20-trihydroxy-9,10,14-trimethyl-11,22-dioxo-4,9-cyclo-9,10-secocholest-5-en-25-yl acetate (1)
(2e)-3-(acetoxymethyl)-5-[(1s,4ar,8ar)-2-(hydroxymethyl)-5,5,8a-trimethyl-1,4,4a,5,6,7,8,8a-octahydro-1-naphthalenyl]-2-pentenoic acid (1)
(2e)-3-[4-({2-o-[(2s,3r,4r)-3,4-dihydroxy-4-(hydroxymethyl)tetrahydro-2-furanyl]-beta-d-glucopyranosyl}oxy)-3-methoxyphenyl]acrylic acid (1)
(3R)-beta-Leucine (1)
(3beta,9xi)-3,14-Dihydroxycarda-5,20(22)-dienolide (1)
(3r,4r,6r)-n-allyl-6-{[4-(3-hydroxyphenyl)-1h-1,2,3-triazol-1-yl]methyl}-n-methylquinuclidine-3-carboxamide (1)

Modification

N6-dimethyl-L-lysine (1)

Study type

Transcription profiling by array (52)
RNA-seq of coding RNA (6)
ChIP-seq (3)
ChIP-chip by tiling array (2)
Other (2)
Methylation profiling by high throughput sequencing (2)
Transcription profiling by SAGE (1)
Comparative genomic hybridization by array (1)
Methylation profiling by array (1)
RNA-seq of non coding RNA (1)

Release Date

2025 (226)
2024 (186)
2022 (178)
2023 (169)
2021 (156)
2020 (97)
2019 (75)
2018 (61)
2015 (49)
2017 (44)
2016 (37)
2013 (27)
2011 (27)
2026 (24)
2014 (21)
2010 (17)
2012 (15)
2009 (8)
2008 (6)
2007 (4)
2006 (4)
2005 (2)

Lab affiliation

Key Laboratory of Functional Protein Research of Guangdong Higher Education Institutes, Institute of Life and Health Engineering, College of Life Science and Technology, Jinan University, Guangzhou 510632, China (3)
State Key Laboratory of Crop Stress Biology for Arid Areas, College of Agronomy, Northwest A&F University, Yangling, Shaanxi, China (2)
Barnett Institute of Chemical and Biological Analysis and Department of Chemistry & Chemical Biology, Northeastern University, Boston, MA, USA. (1)
Beijing Friendship Hospital, Capital Medical University (1)
CAS Key Laboratory of Tropical Marine Bio-resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou, China (1)
CAS Key Laboratory of Tropical Marine Bio-resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Sciences,Guangzhou, China (1)
Center for Metabolic Disease Research (CMDR) Lewis Katz School of Medicine at Temple University Medical Education and Research Building, Room 1060 3500 N. Broad Street Philadelphia, PA 19140, USA (1)
China Agricultural University (1)
College of Life Sciences (1)
College of Life sciences, Heilongjiang University/Heilongjiang Provincial Key Laboratory of Ecological Restoration and Resource Utilization for Cold Region, China (1)
College of Veterinary Medicine, Gansu Agricultural University (1)
Cornell University (1)
Cornell University, Ithaca NY (USA) (1)
Department of Cellular and Molecular Pharmacology University of California San Francisco (UCSF) San Francisco, CA 94158 USA (1)
Department of Chemistry, The University of Hong Kong (1)
Department of Pathophysiology, Key Laboratory of Cell Differentiation and Apoptosis of Chinese Ministry of Education, Rui-Jin Hospital, and State Key Laboratory of Oncogenes and Related Genes and Chinese Academy of Medical Sciences Research Unit (NO.2019RU043), Shanghai Cancer Institute, Shanghai Jiao Tong University School of Medicine, Shanghai 200025, China. (1)
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 50463, Republic of Korea (1)
Department of Structural Biology and Developmental Neurobiology, Center for Proteomics and Metabolomics, St. Jude Children's Research Hospital, Memphis, TN 38105, USA (1)
Guangdong Provincial Key Laboratory of Protein Function and Regulation in Agricultural Organisms, College of Life Sciences, South China Agricultural University, Guangzhou 510642, PR China (1)
Institute for Systems Biology, Seattle, WA, US (1)
Institute for Systems Biology, Seattle, WA, USA (1)
Institute of Ecology and Evolution, University of Bern, Baltzerstrasse 6, CH-3012 Bern, Switzerland (1)
Institute of Life and Health Engineering, College of Life Science and Technology, Jinan University (1)
Key Laboratory of Acupuncture and Medicine Research of Ministry of Education, Nanjing University of Chinese Medicine (1)
Key Laboratory of Functional Protein Research of Guangdong Higher Education Institutes, Institute of Life and Health Engineering, College of Life Science and Technology, Jinan University, Guangzhou, China (1)
Laboratory of Molecular Pharmacology and Drug Discovery, Institute of Chinese Materia Medica, The Fourth Clinical Medical College, Guangzhou University of Chinese Medicine, Shenzhen, Guangdong 518033, China (1)
MOE Key Laboratory of Tumor Molecular Biology and Key Laboratory of Functional Protein Research of Guangdong Higher Education Institutes, Institute of Life and Health Engineering, Jinan University, Guangzhou 510632, China (1)
MOE Key Laboratory of Tumor Molecular Biology and Key Laboratory of Functional Protein Research of Guangdong Higher Education Institutes, Institute of Life and Health Engineering, Jinan University, Guangzhou, China (1)
Nantong University (1)
Proteomics Facility, Institute of Biotechnology, Cornell University, Ithaca, NY 14853, USA (1)

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Based on the Metabolomic Approach the Energy Metabolism Responses of Oriental River Prawn Macrobrachium nipponense Hepatopancreas to Acute Hypoxia and Reoxygenation

Hypoxia represents a major physiological challenge for prawns and is a problem in aquaculture. Therefore, an understanding of the metabolic response mechanism of economically important prawn species to hypoxia and re-oxygenation is essential. However, little is known about the intrinsic mechanisms b...

2021-05-17 | MTBLS584 | MetaboLights

Silver binding proteins in S. aureus

The rapid emergence of drug resistant Staphylococcus aureus (S. aureus), in particular, methicillin-resistant S. aureus (MRSA) poses a serious threat to public health globally. Reuse of metal-based antimicrobials stands for one of the most promising strategies to resensitize drug resistant bacteria ...

ORGANISM(S): Staphylococcus aureus

2021-09-10 | PXD025106 | Pride

Silver-binding protein S. aureus

Global proteome-wide analysis of cysteine S-nitrosylation in Toxoplasma gondii

Toxoplasma gondii transmitted via various route and rapidly duplicated during the acute infection, which caused the important zoonosis regarding to medicine and veterinary, toxoplasmosis. T. gondii possessed innate capability of producing nitric oxide (NO) and nitric oxide derivatives and S-nitrosyl...

ORGANISM(S): Toxoplasma gondii

2024-01-26 | PXD046083 | Pride

Toxoplasma gondii post-translational modifications cysteine s-nitrosylation s-nitrosylated pro-teome

Quantum Spin Hall States in Stanene/Ge(111).

Not available

S-EPMC4642698 | biostudies-literature

Exploring the mystical relationship between the Moon, Sun, and birth rate.

Not available

S-EPMC11218357 | biostudies-literature

Symmetry collapse due to the presence of multiple local aromaticity in Ge₂₄⁴.

Not available

S-EPMC9021308 | biostudies-literature