Ge Yali Y - OmicsDI

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Transcriptomics (3)
Metabolomics (2)
Genomics (1)
Proteomics (1)

Organisms

Bos taurus (2)
Homo sapiens (2)
Cucumis sativus (1)

Repository

biostudies-arrayexpress (4)
MetaboLights (2)
iProX (1)

Technology Type

Mass spectrometry (2)

Instrument Platform

Gas Chromatography MS - positive (1)
Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2015 (2)
2011 (1)
2010 (1)
2018 (1)
2025 (1)
2021 (1)

CHEBI ID

CHEBI:62783 (1)
CHEBI:68950 (1)
CHEBI:176647 (1)
CHEBI:176649 (1)
CHEBI:27082 (1)
CHEBI:42383 (1)
CHEBI:42111 (1)
CHEBI:17521 (1)
CHEBI:22599 (1)
CHEBI:26984 (1)
CHEBI:17025 (1)
CHEBI:33508 (1)
CHEBI:27693 (1)
CHEBI:17822 (1)
CHEBI:15978 (1)
CHEBI:18237 (1)
CHEBI:22660 (1)
CHEBI:22653 (1)
CHEBI:18186 (1)
CHEBI:26986 (1)
CHEBI:17234 (1)
CHEBI:28300 (1)
CHEBI:29864 (1)
CHEBI:15676 (1)
CHEBI:24898 (1)
CHEBI:16934 (1)
CHEBI:25017 (1)
CHEBI:86348 (1)
CHEBI:28842 (1)
CHEBI:15428 (1)

Metabolite Name

4-methoxyresorcinol-1-O-glucoside (1)
2-methoxyhydroquinone (1)
B-sitosterol (1)
Xylotriose (1)
3-O-caffeoyl-quinic acid (1)
4-O-B-D-glucopyranosylvanillic acid (1)
A-linolenic acid (1)
Glycerol-1/3-phosphate (1)
L-dihydroorotic acid (1)
Malic acid, 4-ethyl ether (1)
B-cyano-alanine (1)
1-dimethylisopropylsilyloxy-3-methylbut-2-ene (1)
Sulphate (1)
\TG(22:5(4Z,7Z,10Z,13Z,16Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/18:3(9Z,12Z,15Z))\ (1)
\TG(20:3(5Z,8Z,11Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/20:5(5Z,8Z,11Z,14Z,17Z))\ (1)
\TG(18:2(9Z,12Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z))\ (1)
\TG(20:4(8Z,11Z,14Z,17Z)/22:5(7Z,10Z,13Z,16Z,19Z)/20:5(5Z,8Z,11Z,14Z,17Z))\ (1)
\TG(22:5(4Z,7Z,10Z,13Z,16Z)/22:5(7Z,10Z,13Z,16Z,19Z)/18:4(6Z,9Z,12Z,15Z))\ (1)
\TG(20:5(5Z,8Z,11Z,14Z,17Z)/20:3n6/22:6(4Z,7Z,10Z,13Z,16Z,19Z))\ (1)
\TG(18:4(6Z,9Z,12Z,15Z)/22:4(7Z,10Z,13Z,16Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z))\ (1)
\TG(22:5(7Z,10Z,13Z,16Z,19Z)/18:3(6Z,9Z,12Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z))\ (1)
\TG(20:5(5Z,8Z,11Z,14Z,17Z)/20:4(8Z,11Z,14Z,17Z)/22:5(7Z,10Z,13Z,16Z,19Z))\ (1)
\TG(20:5(5Z,8Z,11Z,14Z,17Z)/20:4(5Z,8Z,11Z,14Z)/22:5(7Z,10Z,13Z,16Z,19Z))\ (1)
\TG(20:4(5Z,8Z,11Z,14Z)/22:5(7Z,10Z,13Z,16Z,19Z)/20:5(5Z,8Z,11Z,14Z,17Z))\ (1)
\TG(20:5(5Z,8Z,11Z,14Z,17Z)/20:3(5Z,8Z,11Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z))\ (1)
\TG(22:5(4Z,7Z,10Z,13Z,16Z)/20:5(5Z,8Z,11Z,14Z,17Z)/20:4(8Z,11Z,14Z,17Z))\ (1)
\TG(20:4(8Z,11Z,14Z,17Z)/20:5(5Z,8Z,11Z,14Z,17Z)/22:5(7Z,10Z,13Z,16Z,19Z))\ (1)
\TG(20:4(8Z,11Z,14Z,17Z)/20:4(8Z,11Z,14Z,17Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z))\ (1)
\TG(20:4(8Z,11Z,14Z,17Z)/22:5(4Z,7Z,10Z,13Z,16Z)/20:5(5Z,8Z,11Z,14Z,17Z))\ (1)
\TG(20:4(8Z,11Z,14Z,17Z)/20:4(5Z,8Z,11Z,14Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z))\ (1)

Study type

Comparative genomic hybridization by array (2)
ChIP-seq (1)
Transcription profiling by array (1)

Release Date

2015 (2)
2011 (1)
2010 (1)

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Translatome analysis by iTRAQ in cucumber

Proteome analysis by iTRAQ mass spec of cucumber plant samples

ORGANISM(S): Cucumis Sativus

2018-03-23 | PXD009314 |

Assessment of genome integrity with array CGH of cattle transgenic cell lines produced by homologous recombination and somatic cell cloning

Background Transgenic cattle carrying multiple genomic modifications have been produced by sequential gene targeting and serial rounds of somatic cell chromatin transfer (cloning). However, cloning efficiency tends to decline with the increase of rounds of cloning. It is possible that multiple round...

ORGANISM(S): Bos taurus

2011-05-23 | E-GEOD-26132 | biostudies-arrayexpress

Towards engineering ectomycorrhization into switchgrass bioenergy crops via a lectin receptor-like kinase

Soil-borne microbes can establish compatible relationships with host plants, providing a large variety of nutritive and protective compounds in exchange for photosynthesized sugars. However, the molecular mechanisms mediating the establishment of these beneficial relationships remain unclear. Our pr...

2021-08-11 | MTBLS2597 | MetaboLights

Deciphering the Role of N-Acetyltransferase 10 in Thalamic Hemorrhage Through Integrative Multi-Omics and Experimental Validation

Thalamic hemorrhage (TH) is a severe neurological condition, the molecular mechanisms of which are poorly understood, particularly in clinical settings. N-acetyltransferase 10 (NAT10), a regulator of RNA N4-acetylcytidine (ac4C) modification, has been implicated in cell cycle regulation and ident...

2025-11-18 | MTBLS11752 | MetaboLights

Gene expression profiling in Nalm6 ALL leukemia cells

Identify the expression intensity for all genes in Nalm6 cells and all the genes are divided into 4 equal groups with group 1 containing the 25% of genes that were expressed at the highest levels, and group 4 containing the 25% of genes that were expressed at the lowest levels. Total RNA are isolate...

ORGANISM(S): Homo sapiens

2015-11-03 | E-GEOD-44214 | biostudies-arrayexpress

Initial analysis of copy number variations in cattle selected for resistance or susceptibility to intestinal nematodes

Here we describe the initial analysis of copy number variations in cattle selected for resistance or susceptibility to intestinal nematodes The custom aCGH chips that interrogated the whole genome CNVs were build for 3 pairs of contemporary parasite-susceptible and resistant Angus.

ORGANISM(S): Bos taurus

2010-12-22 | E-GEOD-21538 | biostudies-arrayexpress

Mechanisms of Ikaros Tumor Suppression with HDAC1 through distinct histone markers in Pre-B ALL Leukemia

Ikaros functions as a master regulator of lymphocyte differentiation and a tumor suppressor. Ikaros binds DNA and regulates gene expression by chromatin remodeling. Mechanisms of Ikaros-mediated tumor suppression are unknown. Here we examined genome-wide occupancy of Ikaros and histone deacetylase 1...