Ge Zheng Z - OmicsDI

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Unknown (587)
Proteomics (47)
Metabolomics (14)
Transcriptomics (7)
Genomics (2)
Models (1)

Organisms

Homo sapiens (21)
Mus musculus (7)
Synechocystis sp. PCC 6803 (4)
Arabidopsis thaliana (3)
Saccharomyces cerevisiae (3)
Tardigrada (2)
Staphylococcus aureus (2)
Urocitellus parryii (1)
Oryctolagus cuniculus (1)
Acyrthosiphon pisum (1)
Carya cathayensis (1)
Cryptosporidium andersoni (1)
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Mycobacterium tuberculosis H37Rv (1)
Mycobacterium tuberculosis OFXR-32 (1)
Myotis lucifugus (1)
Pteropus alecto (1)
Sus scrofa domesticus (1)
Triticum aestivum (1)

Repository

pride (31)
iProX (13)
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biostudies-arrayexpress (9)
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Tissue

Cell culture (8)
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Disease

COVID-19 (2)
Acute leukemia (1)
Malignant neoplasm of ovary (1)
Polycystic ovary syndrome (1)
Primary ovarian insufficiency (1)
Thyroid cancer (1)

Technology Type

Mass Spectrometry (31)
Shotgun proteomics (15)
Mass spectrometry (10)
Immunopeptidomics (3)
Top-down proteomics (3)
Mass spectrometry assay (2)
Affinity purification coupled with mass spectrometry proteomics (2)
Data-dependent acquisition (2)
Data-independent acquisition (2)
SRM/MRM (2)
All-ion fragmentation (1)
Gel-based experiment (1)
SWATH MS (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (8)
Liquid Chromatography MS - positive - reverse phase (6)
Liquid Chromatography MS - positive - hilic (3)
Q Exactive HF (2)
TripleTOF 6600 (2)
Liquid Chromatography MS - - reverse phase (2)
Q Exactive (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - Alternating (LC-MS (Alternating)) (1)
Liquid Chromatography MS - negative - hilic (1)

Publication Date

2024 (11)
2023 (11)
2025 (8)
2022 (8)
2020 (7)
2021 (5)
2014 (3)
2012 (3)
2019 (3)
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2018 (3)
2017 (2)
2013 (1)
2011 (1)
2010 (1)
2016 (1)

UNIPROT ID/AC

O24646 (1)
P43254 (1)
Q8LGH4 (1)
Q9FFA7 (1)
Q9FN03 (1)
Q9LIE5 (1)
Q9LTJ6 (1)
Q9M086 (1)
Q9SYX2 (1)

CHEBI ID

CHEBI:15741 (4)
CHEBI:18300 (4)
CHEBI:7916 (4)
CHEBI:15354 (3)
CHEBI:15901 (3)
CHEBI:16204 (3)
CHEBI:16467 (3)
CHEBI:16566 (3)
CHEBI:16704 (3)
CHEBI:16737 (3)
CHEBI:16755 (3)
CHEBI:16828 (3)
CHEBI:17066 (3)
CHEBI:17151 (3)
CHEBI:17154 (3)
CHEBI:17296 (3)
CHEBI:17351 (3)
CHEBI:17368 (3)
CHEBI:17568 (3)
CHEBI:17750 (3)
CHEBI:17859 (3)
CHEBI:18183 (3)
CHEBI:27248 (3)
CHEBI:28238 (3)
CHEBI:28834 (3)
CHEBI:28997 (3)
CHEBI:29069 (3)
CHEBI:30746 (3)
CHEBI:30769 (3)
CHEBI:30805 (3)

Metabolite Name

Deoxycholic acid (3)
L-Arginine (3)
Linoleic acid (3)
Maleic acid (3)
Pantothenic acid (3)
1,3,5-Trihydroxybenzene (2)
1-Methyladenosine (2)
1H-Indole-3-carboxaldehyde (2)
Adenosine (2)
Adipic acid (2)
Aniline (2)
Beta-Tyrosine (2)
Betaine (2)
Chenodeoxycholic acid (2)
Cholic acid (2)
Choline (2)
Citric acid (2)
Cortisone (2)
Creatinine (2)
Cytidine (2)
Dibutyl phthalate (2)
Dodecanoic acid (2)
Glutaric acid (2)
Glycerophosphocholine (2)
Guanine (2)
Homovanillic acid (2)
Hypoxanthine (2)
Imidazole-4-acetaldehyde (2)
Ketoleucine (2)
L-Phenylalanine (2)

IsPrivate

False (1)

Modelling Approach

Ordinary differential equation model (1)

Study type

ChIP-seq (2)
Transcription profiling by array (2)
RNA-seq of coding RNA (2)
RNA-seq of non coding RNA (2)
Other (1)

Release Date

2025 (92)
2024 (86)
2023 (78)
2022 (76)
2021 (61)
2020 (36)
2019 (26)
2026 (22)
2018 (22)
2015 (22)
2016 (17)
2017 (15)
2014 (13)
2013 (12)
2012 (6)
2011 (5)
2007 (2)
2010 (1)
2009 (1)
2008 (1)
2006 (1)
2003 (1)

Lab affiliation

College of Veterinary Medicine, Henan Agricultural University, Zhengzhou, China (2)
State Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, No.1 West Beichen Rd., Beijing 100101, China (2)
State Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, No.1 West Beichen Rd., Beijing 100101, China. (2)
1 Shanghai Key Laboratory of Tuberculosis, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai 200433, PR China 2 Department of Microbiology and Immunology, Tongji University School of Medicine, Shanghai 200049, PR China 3 Clinical Translation Research Center, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai 200433, China. (1)
Army Medical University (Third Military Medical University) (1)
China Agricultural University (West Campus) College of Animal Science and Technology (1)
Department of Pathophysiology, Key Laboratory of Cell Differentiation and Apoptosis of Chinese Ministry of Education, Rui-Jin Hospital, Shanghai Jiao Tong University School of Medicine (SJTU-SM), Shanghai 200025, China. (1)
Department of Pathophysiology, Key Laboratory of Cell Differentiation and Apoptosis of Chinese Ministry of Education, Rui-Jin Hospital, and State Key Laboratory of Oncogenes and Related Genes and Chinese Academy of Medical Sciences Research Unit (NO.2019RU043), Shanghai Cancer Institute, Shanghai Jiao Tong University School of Medicine, Shanghai 200025, China. (1)
Department of Reproductive Medicine, Affiliated Jinling Hospital , Nanjing Medical University (1)
Guangxi University,China (1)
Key Laboratory of Functional Protein Research of Guangdong Higher Education Institutes, Institute of Life and Health Engineering, College of Life Science and Technology, Jinan University, Guangzhou 510632, China (1)
Key Laboratory of Molecular Epigenetics of the Ministry of Education (MOE), Northeast Normal University (1)
MOE Key Laboratory of Tumor Molecular Biology and Key Laboratory of Functional Protein Research of Guangdong Higher Education Institutes, Institute of Life and Health Engineering, Jinan University, Guangzhou 510632, China (1)
NHC Key Laboratory of Diagnosis and Treatment on Brain Functional Diseases, The First Affiliated Hospital of Chongqing Medical University, 1 Youyi Road, Yuzhong District, Chongqing 400016, China; (1)
National Key Laboratory of Veterinary Public Health and Safety, College of Veterinary Medicine, China Agricultural University, Beijing, 100094, PR China. (1)
National Key Laboratory of Veterinary Public Health and Safety, College of Veterinary Medicine, China Agricultural University, Beijing, 100094, (1)
National Key Laboratory of Veterinary Public Health and Safety, College of Veterinary Medicine, China Agricultural University, Beijing, 100094National Key Laboratory of Veterinary Public Health and Safety, College of Veterinary Medicine, China AgriculturNational Key Laboratory of Veterinary Public Health and Safety, College of Veterinary Medicine, China Agricultural University, Beijing, 100094,al University, Beijing, 100094, (1)
Nurturing Station for the State Key Laboratory of Subtropical Silviculture, Zhejiang A 20 & F University, Dong Hu Campus, 88 Northern Circle Road, Linan 311300, China. (1)
School of Life Sciences, Westlake University, Hangzhou, Zhejiang Province, China (1)
Shanghai Key Laboratory of Tuberculosis, Clinic and Research Center of Tuberculosis,Shanghai Pulmonary Hospital, Tongji University School of Medicine (1)
State Key Laboratory of Biocatalysis and Enzyme Engineering, School of Life Sciences, Hubei University, Wuhan, Hubei 430062, China (1)
State Key Laboratory of Crop Stress Biology for Arid Areas, College of Agronomy, Northwest A&F University, Yangling, Shaanxi, China (1)
State Key Laboratory of Materials-Oriented Chemical Engineering, College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, 211816, P.R. China; (1)
State Key Laboratory of Reproductive Medicine, Department of Histology and Embryology, Nanjing Medical University, Nanjing, China (1)
The First Affiliated Hospital of Nanjing Medical University (1)
The Second Affiliated Hospital of Zhejiang University, Medicine Cancer Institute (1)
The Third Affiliated Hospital of Shenzhen University (1)
Tsinghua University (1)

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Construction of pseudorabies virus variant attenuated vaccine: codon deoptimization of US3 and UL56 genes based on PRV gE/TK deletion strain.

Not available

S-EPMC10595036 | biostudies-literature

Tailoring Ge Nanocrystals via Ag-Catalyzed Chemical Vapor Deposition to Enhance the Performance of Non-Volatile Memory.

Not available

S-EPMC12844894 | biostudies-literature

Histone Deacetylase BpHST1 Regulates Plant Architecture and Photosynthesis in Birch.

Not available

S-EPMC12729910 | biostudies-literature

Ouyang2014 - photomorphogenic UV-B signalling network

Ouyang2014 - photomorphogenic UV-B signalling network This model is described in the article: Coordinated photomorphogenic UV-B signaling network captured by mathematical modeling. Ouyang X, Huang X, Jin X, Chen Z, Yang P, Ge H, Li S, Deng XW. Proc. Natl. Acad. Sci. U.S.A. 201...

2024-09-02 | BIOMD0000000545 | BioModels

Chemistry Design Towards a Stable Sulfide-Based Superionic Conductor Li₄ Cu₈ Ge₃ S₁₂.

Not available

S-EPMC6850061 | biostudies-literature

Serum organic acid metabolites can be used as potential biomarkers to identify prostatitis, benign prostatic hyperplasia, and prostate cancer (Untargeted assay)

BACKGROUND: Noninvasive methods for the early identify diagnosis of prostatitis, benign prostatic hyperplasia (BPH), and prostate cancer (PCa) are current clinical challenges.

METHODS: The serum metabolites of 20 healthy individuals and patients with prosta...

2023-04-17 | MTBLS6039 | MetaboLights

Serum organic acid metabolites can be used as potential biomarkers to identify prostatitis, benign prostatic hyperplasia, and prostate cancer (Targeted organic acid assay)

BACKGROUND: Noninvasive methods for the early identify diagnosis of prostatitis, benign prostatic hyperplasia (BPH) and prostate cancer (PCa) are current clinical challenges.

METHODS: The serum metabolites of 20 healthy individuals and patients with prostat...

2023-04-17 | MTBLS6038 | MetaboLights

Multi-omics association analysis reveals interactions between the oropharyngeal microbiome and the metabolome in pediatric patients with influenza A virus pneumonia.

Children are at high risk for influenza A virus (IAV) infections, which can develop into severe illnesses. However, little is known about interactions between the microbiome and respiratory tract metabolites and their impact on the development of IAV pneumonia in children. Using a combination of liq...

2024-09-25 | MTBLS4816 | MetaboLights

Hyocholic acid species as novel biomarkers for metabolic disorders

Hyocholic acid (HCA) is a major bile acid (BA) species in the BA pool of pigs, a species known for its exceptional resistance to spontaneous development of diabetic phenotypes. HCA and its derivatives are also present in human blood and urine. We investigate whether human HCA profiles can predict th...

2021-10-06 | MTBLS2343 | MetaboLights

Identification of four insertion sites for foreign genes in a pseudorabies virus vector.

Not available

S-EPMC8117506 | biostudies-literature

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