Geng Li L - OmicsDI

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Unknown (1498)
Proteomics (35)
Transcriptomics (13)
Genomics (9)
Metabolomics (5)
Multiomics (1)

Organisms

Homo sapiens (22)
Salmonella enterica subsp. enterica serovar Cerro (15)
Streptococcus thermophilus (15)
Trypanosoma evansi (15)
Schistosoma japonicum (15)
Argulus foliaceus (15)
Oenothera glazioviana (15)
NEWT:2126719 (15)
Ruditapes decussatus (15)
Desulfofundulus kuznetsovii DSM 6115 (15)
Paulownia (15)
Rathayibacter toxicus (15)
Betacoronavirus sp. (15)
Pseudomonas sp. UK4 (15)
Chlorocebus aethiops aethiops (15)
Pseudomonas aeruginosa (15)
Methylorubrum extorquens DM4 (15)
Naegleria fowleri (15)
Neurospora crassa (15)
Methylorubrum extorquens PA1 (15)
artificial sequences (15)
Streptomyces lividans TK24 (15)
Mus musculus (8)
Rattus norvegicus (2)
Thermomyces lanuginosus (1)
Yersinia pestis (1)
Elaphe taeniura (1)
Aerodramus hirundinaceus (1)
Fusarium pseudograminearum (1)
Drosophila melanogaster (1)

Organisms

Yersinia pestis (1)
Mus musculus (1)

Repository

iProX (18)
biostudies-arrayexpress (16)
pride (15)
MetaboLights (5)
EGA (4)
MassIVE (2)
ENA (2)
geo (1)

Tissue

Cell culture (3)
Leaf (2)
Vitreous humor (1)
Pancreas (1)
Seed (1)
Early embryonic cell (1)
Ovary (1)
Heart (1)
Root (1)
Embryo (1)

Disease

Diabetic retinopathy (1)
Acute leukemia (1)

Technology Type

Mass Spectrometry (15)
Shotgun proteomics (8)
Mass spectrometry (5)
Gel-based experiment (3)
Data-independent acquisition (2)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
SRM/MRM (1)
Data-dependent acquisition (1)
Bottom-up proteomics (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)

Instrument Platform

Q Exactive (2)
10X Genomics Chromium Controller Instrument, Thermocycler (PCR machine), Bioanalyzer 2200 (Agilent), Qubit Fluorometer (Thermo Fisher Scientific) (1)
Biological safety cabinet, Water bath (37°C), Centrifuge, 70 µm and 35 µm cell strainers, Countstar Fluorescence Cell Analyzer (1)
Surgical scalpel (1)
Illumina NovaSeq 6000 (1)
Quattro micro API (Waters) (1)
Liquid Chromatography MS - Negative (LC-MS (Neg)) (1)
Liquid Chromatography MS - Positive (LC-MS (Pos)) (1)
Agilent 5975E GC/MSD (Agilent) (1)
API 4000 QTRAP (AB Sciex) (1)
Xevo QTof MS (Waters) (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2020 (7)
2014 (4)
2024 (4)
2022 (4)
2017 (4)
2012 (3)
2021 (3)
2026 (2)
2015 (2)
2013 (2)
2011 (2)
2010 (2)
2023 (2)
2025 (2)
2008 (1)
2019 (1)
2016 (1)

CHEBI ID

CHEBI:30769 (5)
CHEBI:17992 (3)
CHEBI:17858 (3)
CHEBI:16856 (3)
CHEBI:15741 (3)
CHEBI:17268 (3)
CHEBI:28044 (3)
CHEBI:16335 (3)
CHEBI:18012 (3)
CHEBI:30797 (3)
CHEBI:30744 (3)
CHEBI:30915 (3)
CHEBI:27732 (3)
CHEBI:27897 (3)
CHEBI:28436 (2)
CHEBI:17327 (2)
CHEBI:17141 (2)
CHEBI:16077 (2)
CHEBI:15710 (2)
CHEBI:18026 (2)
CHEBI:24809 (2)
CHEBI:27386 (2)
CHEBI:15584 (2)
CHEBI:36281 (2)
CHEBI:28635 (2)
CHEBI:16552 (2)
CHEBI:17713 (2)
CHEBI:26984 (2)
CHEBI:17553 (2)
CHEBI:17025 (2)

Metabolite Name

Citrate (3)
Sucrose (3)
Phytol (2)
ADP (2)
Isocitrate (2)
Mannose (2)
Fructose (2)
Glucose (2)
Dihydroxyacetone phosphate (2)
Alpha-Linolenate (1)
(9E)-Octadecenoic Acid (1)
FA(8:0) (1)
Glycochenodeoxycholic acid (GCDCA) (1)
Glycocholic acid (GCA) (1)
Glycodeoxycholic acid (GDCA) (1)
Glycolithocholic Acid sulfate (1)
P-Hydroxybenzoic acid (1)
FA(6:0) (1)
Taurochenodeoxycholic Acid (TCDCA) (1)
Taurohyocholic acid (THCA) (1)
Taurolithocholic acid -3-O-sulfate (1)
3a,6a,7a,12a-Tetrahydroxy-5b-cholanoic acid (2a,3a,7a,12a-THBA) (1)
FA(13:0) (1)
Vanillomandelic acid (VMA) (1)
Dioxolithocholic acid (1)
Glycerol-3-Phosphate (1)
CL(18:2/18:2/18:2/18:1) (1)
Homovanillic acid (HVA) (1)
FA(10:0) (1)
N-Carbamoyl-L-aspartic acid (1)

First Public Date

2014 (2)

Classification

bacteria (1)

Study type

Transcription profiling by array (6)
ChIP-seq (3)
Other (2)
RNA-seq of coding RNA (2)
Transcription profiling by RT-PCR (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2025 (247)
2022 (226)
2024 (203)
2023 (201)
2021 (153)
2020 (115)
2019 (67)
2018 (60)
2015 (51)
2017 (48)
2026 (43)
2016 (39)
2014 (21)
2013 (15)
2011 (6)
2008 (6)
2012 (5)
2009 (4)
2010 (3)
2005 (1)

Lab affiliation

State Key Laboratory of Reproductive Medicine and Offspring Health, Center for Reproductive Medicine, Institute of Women, the Second Hospital, Children and Reproductive Health, Shandong University (1)
College of Agronomy, Shandong Agricultural University, Tai’an,China (1)
College of Agronomy, Shandong Agricultural University, Tai’an, Shandong,China (1)
dana farber cancer institute and harvard medical school (1)
Biology Department University of Florida (1)
University of Health and Rehabilitation Sciences (1)
Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences.Shenzhen 518055，China (1)
Department of Cell Biology, Harvard Medical School, Boston, USA (1)
Agronomy College, Henan Agricultural University, China (1)
Shanghai Center for Systems Biomedicine, Shanghai Jiao Tong University, Shanghai, China. (1)
UNC-Chapel Hill (1)
Eye Institute and School of Optometry, Tianjin Medical University Eye Hospital, (1)
Nation Center for Protein Sciences, Beijing (1)
Shandong Technology Innovation Center of Molecular Targeting and Intelligent Diagnosis and Treatment (1)
Peking University (1)

Tags

xref:PubMed:23365080 (1)
xref:PubMed:21345178 (1)
pathogen (1)
pathogen:bacterium (1)

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Expression analysis of Tim-3 knockdown RAW264.7 cell

Investigation of whole genome gene expression level changes in a Tim-3 knockdown RAW264.7 cell, compared to control siRNA transfected RAW264.7 cell. The Tim-3 knockdown of this cell render it hyper-reactive to TLR stimulation. Tim-3 knockdown analyzed in this study are further described in Li Y, Fen...

ORGANISM(S): Mus musculus

2012-12-05 | GSE42729 | GEO

Expression analysis of Tim-3 knockdown RAW264.7 cell

ORGANISM(S): Mus musculus

2012-12-05 | E-GEOD-42729 | biostudies-arrayexpress

Genetic Dissection of Salt Tolerance and Yield Traits of Geng (japonica) Rice by Selective Subspecific Introgression.

Not available

S-EPMC10296937 | biostudies-literature

Pedigree genome data of an early-matured Geng/japonica glutinous rice mega variety Longgeng 57.

Not available

S-EPMC10884013 | biostudies-literature

Time-ordering japonica/geng genomes analysis indicates the importance of large structural variants in rice breeding.

Not available

S-EPMC9829401 | biostudies-literature

Cytochrome P450 2C9 (CYP2C9) polymorphisms in Chinese Li population.

Not available

S-EPMC4723878 | biostudies-literature

Genomic insights on the contribution of introgressions from Xian/Indica to the genetic improvement of Geng/Japonica rice cultivars.

Not available

S-EPMC9251437 | biostudies-literature

Multifunctional solvent molecule design enables high-voltage Li-ion batteries.

Not available

S-EPMC10113204 | biostudies-literature

Unveiling Multi-Omics and Immune Landscapes in COVID-19 Patients' Ovaries Microenvironment for Oocyte Competency Biomarkers Identification

Background: The outbreak of coronavirus disease 2019 (COVID-19) poses a considerable health threat to humanity, with potential implications for the ovarian microenvironment remaining uncertain. Methods: Transcriptomic and proteomic analyses of ovarian granulosa cells, along with metabolomic and lipi...

ORGANISM(S): Homo sapiens (Human)

2025-05-07 | PXD058234 | Pride

Low Temperature Fast-Charging Li Ion Batteries Enabled by f-Orbital Hybridization Induced TiNb<sub>2</sub>O<sub>7</sub> Electronic Structure.

Not available

S-EPMC12442630 | biostudies-literature

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1561 Results

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