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TranscriptomicsPlant and bird presence strongly influences the microbial communities in soils of Admiralty Bay, Maritime Antarctica
Understanding the environmental factors that shape microbial communities is crucial, especially in extreme environments, like Antarctica. Two main forces were reported to influence Antarctic soil microbes: birds and plants. Both birds and plants are currently undergoing unprecedented changes in thei...
ORGANISM(S): Bacteria 
2012-05-31 | E-GEOD-33847 | biostudies-arrayexpress
MetabolomicsMicrobial community-scale metabolic modelling predicts personalized short-chain fatty acid production profiles in the human gut
Microbially derived short-chain fatty acids (SCFAs) in the human gut are tightly coupled to host metabolism, immune regulation and integrity of the intestinal epithelium. However, the production of SCFAs can vary widely between individuals consuming the same diet, with lower levels often associated ...
2026-05-26 | MTBLS2308 | MetaboLights
TranscriptomicsComprehensive, high resolution analysis of cis-acting regulatory networks at the alpha globin locus (array)
We have combined the 4C chromosome conformation capture protocol with high throughput, genome-wide sequence analysis to characterise in full a cis-acting regulatory network at a single locus. In contrast to methods which identify large interacting regions (10-1000kb), the 4C approach provides a comp...
ORGANISM(S): Homo sapiens 
2013-06-06 | E-GEOD-42383 | biostudies-arrayexpress
UnknownComparing Quality of Surgical Care Between the US Department of Veterans Affairs and Non-Veterans Affairs Settings: A Systematic Review.
Not available
S-EPMC10344435 | biostudies-literature
GenomicsA SNF2 protein targets variable copy number repeats and thereby influences allele-specific expression
ATRX is an X-linked gene of the SWI/SNF family whose role in vivo is currently unknown. Mutations in ATRX cause syndromal mental retardation. ATRX binds to tandem repeat (TR) sequences both in heterochromatin (e.g. telomeres) and euchromatin. Genes associated with these TRs can be dysregulated when ...
ORGANISM(S): Homo sapiens 
2010-11-02 | E-GEOD-22162 | biostudies-arrayexpress
TranscriptomicsComprehensive, high resolution analysis of cis-acting regulatory networks at the alpha globin locus (HTS)
We have combined the 4C chromosome conformation capture protocol with high throughput, genome-wide sequence analysis to characterise in full a cis-acting regulatory network at a single locus. In contrast to methods which identify large interacting regions (10-1000kb), the 4C approach provides a comp...
ORGANISM(S): Homo sapiens 
2013-06-06 | E-GEOD-42382 | biostudies-arrayexpress
TranscriptomicsTime course of the mRNA expression in wild-type Thermus thermophilus HB8 strain grown on a rich medium (labeling:ENZO)
We observed the expression profile of the total mRNA of wild-type Thermus thermophilus HB8 strain grown in a rich (TT) medium at 70oC. Keywords: time course Three wild-type T. thermophilus HB8 strains were pre-cultured at 70oC for 16 h in 3 ml of TT medium containing 0.8% polypeptone, 0.4% yeast ext...
ORGANISM(S): Thermus thermophilus HB8 
2010-05-27 | E-GEOD-7165 | biostudies-arrayexpress
TranscriptomicsComparative expression analysis between CRP (TTHA1437) deletion mutant and wild-type of T. thermophilus HB8
We observed the expression profile of the total mRNA of crp (TTHA1437) deletion mutant of Thermus thermophilus HB8 strain grown in a rich (TT) medium at 70oC compared with that of wild type. Keywords: cell type comparison Three wild-type and mutant T. thermophilus HB8 strains were each pre-cultured ...
ORGANISM(S): Thermus thermophilus HB8 
2010-05-27 | E-GEOD-7166 | biostudies-arrayexpress
TranscriptomicsDietary heme alters microbiota and mucosa of mouse colon without functional changes in host-microbe cross-talk.
Colon cancer is a major cause of cancer deaths in Western countries and is associated with diets high in red meat. Heme, the iron-porphyrin pigment of red meat, induces cytotoxicity of gut contents which injures surface cells leading to compensatory hyperproliferation of crypt cells. This hyperproli...
ORGANISM(S): Mus musculus 
2012-12-19 | E-GEOD-40672 | biostudies-arrayexpress
UnknownManagement of symptomatic cholelithiasis: a systematic review.
Not available
S-EPMC9743645 | biostudies-literature
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