Gigantea - OmicsDI

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Unknown (299)
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Arabidopsis thaliana (16)
Aerococcus urinae NBRC 15544 = CCUG 36881 (6)
Allexis (6)
Canis lupus familiaris (6)
Carya cathayensis (6)
Clostridioides difficile 630 (6)
Cyanophora paradoxa (6)
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Leishmania major strain Friedlin (6)
Listeria monocytogenes (6)
Lotus japonicus (6)
Medicago truncatula (3)
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Phlebiopsis gigantea (2)
Jatropha curcas (2)
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Oryza sativa Japonica Group (2)
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Cercis gigantea (nom. inval.) (1)
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Organisms

Phlebiopsis gigantea (44)
Phanerodontia chrysosporium (12)
Arabidopsis thaliana (10)
Cupressus gigantea (6)
Condylactis gigantea (6)
Calotropis gigantea (5)
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Haliotis gigantea (5)
Saxidomus gigantea (5)
Macrocybe gigantea (5)
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Dendronephthya gigantea (4)
Lottia gigantea (4)
Bipolaris gigantea (3)
Phlebiopsis gigantea 11061_1 CR5-6 (3)
Alicella gigantea (3)
Aldabrachelys gigantea (2)
Leucocasia gigantea (2)
Brassica rapa subsp. pekinensis (2)
Solanum tuberosum (2)
Diapherodes gigantea (1)
Smutsia temminckii (1)
Porospora cf. gigantea A (1)
Cactaceae (1)
Grallaria gigantea (1)
Fulica gigantea (1)
Celtica gigantea (1)
Euchroma gigantea (1)
Heterobasidion annosum (1)
Drosophila mettleri (1)

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geo (20)
biostudies-arrayexpress (13)
pride (6)
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UNIPROT ID/AC

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Modelling Approach

Ordinary differential equation model (2)

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Transcription profiling by array (9)
RNA-seq of coding RNA (2)
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Lab affiliation

BioArCh, University of York, United Kingdom (1)
Department of Plant & Microbial Biology, University of Minnesota,St. Paul, MN, USA (1)
Institute for Microbial and Biochemical Sciences, USDA Forest Products Laboratory, Madison WI (1)
Institute for the Animal Production System in the Mediterranean Environment (ISPAAM), National Research Council, Naples ITALY (1)
ProGenTomics, Laboratory of Pharmaceutical Biotechnology, Faculty of Pharmaceutical Sciences, Ghent University, Belgium (1)
Yale University (1)

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Mechanism of extractive degradation by Phlebiopsis gigantea

Mass spectrometric analysis of extracellular proteins in culture filtrate was performed to elucidate the mechanisms of extractive degradation by Phlebiopsis gigantea of microcrystalline cellulose coated and uncoated with an acetone extract from the Pinus taeda (loblolly pine)

ORGANISM(S): Phlebiopsis gigantea 11061_1 CR5-6

2020-09-14 | PXD021332 | Pride

GIGANTEA interaction proteomics time course

Interaction proteomics time course over 24h every 4h, looking for novel interactors of the circadian clock and flowering time protein GIGANTEA. Plants expressing 35S:GIGANTEA:3xFlag6His were used, as well as WT plants for a background control.

ORGANISM(S): Arabidopsis Thaliana (ncbitaxon:3702)

2017-07-03 | MSV000081217 | MassIVE

High-throughput sequencing and degradome analysis reveal two distinct evolutionary patterns of Cercis gigantea microRNAs and their targets

In this study, C. gigantea miRNAs and their target genes were investigated by extracting RNA from young roots, tender stems, young leaves, and flower buds of C. gigantea to establish a small RNA (sRNA) library and a degradome library to further sequence. This study identified 194 known miRNAs belong...

ORGANISM(S): Cercis gigantea

2016-03-10 | E-GEOD-66754 | biostudies-arrayexpress

Comparisons of Phlebiopsis gigantea transcript profiles when cultured different substrates

Collectively classified as white-rot fungi, certain basidiomycetes efficiently degrade the major structural polymers of wood cell walls. A small subset of these Agaricomycetes, exemplified by Phlebiopsis gigantea, is capable of colonizing freshly exposed conifer sapwood despite its high pitch conten...

ORGANISM(S): Phlebiopsis gigantea

2014-10-01 | E-GEOD-53112 | biostudies-arrayexpress

Macrocybe gigantea Raw sequence reads