Gilbert M T P MT

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Unknown (140)
Transcriptomics (10)
Proteomics (8)
Metabolomics (7)
Genomics (1)

Organisms

Homo sapiens (9)
Mus musculus (2)
Schizophyllum commune H4-8 (1)
Mycobacterium tuberculosis SP7 (1)
Oryza sativa Japonica Group (1)
Crotalus durissus terrificus (1)
Eriocheir sinensis (1)
Candidatus Endoriftia persephonae (1)
Mycobacterium tuberculosis SP10 (1)
Mycobacterium tuberculosis SP13 (1)
Cotesia typhae (1)
Mycobacterium tuberculosis SP22 (1)
Cepaea nemoralis (1)
Enterobacter ludwigii (1)
Corynebacterium diphtheriae bv. mitis str. ISS 3319 (1)
Olea europaea (1)
Chlamydomonas reinhardtii (1)
Lama (1)
Planorbella pilsbryi (1)
Wolbachia sp. wMelPop (1)
Pyricularia oryzae P131 (1)
Enterococcus mundtii CRL35 (1)
Pongo pygmaeus (1)
Oncorhynchus tshawytscha (1)
Pseudomonas canadensis (1)
Strongylocentrotus purpuratus (1)
Influenza A virus (A/California/04/2009(H1N1)) (1)
Salmonella enterica subsp. enterica serovar Typhimurium (1)
Homo (1)
Bradyrhizobium diazoefficiens (1)

Repository

biostudies-arrayexpress (10)
MassIVE (7)
MetaboLights (6)
EGA (1)
GNPS (1)
pride (1)

Tissue

Alveolar bone (1)
Dental plaque (1)
Tooth (1)

Disease

Periodontitis (1)

Technology Type

Mass spectrometry (5)
Mass spectrometry assay (1)
Mass Spectrometry (1)
Shotgun proteomics (1)

Instrument Platform

Q Exactive (7)
Liquid Chromatography MS - positive - reverse phase (5)
LTQ Orbitrap Velos (2)
LTQ Orbitrap Elite (2)
MinION (1)
Illumina HiSeq 2000 (1)
MaXis (1)
Orbitrap Fusion Lumos (1)
Liquid Chromatography MS - positive (1)

Publication Date

2023 (6)
2016 (4)
2010 (3)
2013 (2)
2007 (2)
2025 (1)
2012 (1)
2009 (1)
2017 (1)
2024 (1)
2014 (1)

CHEBI ID

CHEBI:35038 (3)
CHEBI:16359 (3)
CHEBI:28865 (3)
CHEBI:143745 (2)
CHEBI:182784 (2)
CHEBI:143757 (2)
CHEBI:195271 (2)
CHEBI:139138 (2)
CHEBI:34687 (2)
CHEBI:173703 (2)
CHEBI:27997 (2)
CHEBI:73858 (2)
CHEBI:34494 (2)
CHEBI:75342 (2)
CHEBI:80774 (2)
CHEBI:64563 (2)
CHEBI:27432 (2)
CHEBI:181874 (1)
CHEBI:195269 (1)
CHEBI:75567 (1)
CHEBI:195266 (1)
CHEBI:195267 (1)
CHEBI:195270 (1)
CHEBI:195272 (1)
CHEBI:191103 (1)
CHEBI:34686 (1)
CHEBI:181126 (1)
CHEBI:195264 (1)
CHEBI:25640 (1)
CHEBI:190340 (1)

Metabolite Name

Tris(2-butoxyethyl) phosphate (3)
Cholic acid (3)
Dibutyl phthalate (DBP) (2)
Lyso-PC(16:0) (2)
Alpha-linolenic acid|linolenic acid|(9Z,12Z,15Z)-octadeca-9,12,15-trienoic acid (2)
1-({[2-(2-furylmethyl)-5-methylpyrrolidinyl]amino}methylene)-7-[8-({[2-(2-fury lmethyl)pyrrolidinyl]amino}methylene)-1,6-dihydroxy-3-methyl-5-(methylethyl)-7 -oxo(2-naphthyl)]-3,8-dihydroxy-6-methyl-4-(methylethyl)naphthalen-2-one (2)
NCGC00385123-01_C22H30O6_7b,9-Dihydroxy-3-(hydroxymethyl)-1,1,6,8-tetramethyl-5-oxo-1,1a,1b,4,4a,5,7a,7b,8,9-decahydro-9aH-cyclopropa[3,4]benzo[1,2-e]azulen-9a-yl acetate (2)
(2S,3S,4S,5R,6R)-6-[[(3S,4S,6aR,6bS,8aR,9R,12aS,14bR)-9-hydroxy-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-5-[(2S,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxyoxane-2-carboxylic acid (2)
2,6-Di-tert-butyl-4-hydroxymethylphenol (2)
Taurocholic acid (2)
1-Stearoyl-2-hydroxy-sn-glycero-3-phosphocholine (2)
Monoolein (2)
Elaidic acid (2)
9(10)-EpOME (2)
NCGC00168953-02_C47H76O17_(3beta,5xi,9xi,22beta)-22,24-Dihydroxyolean-12-en-3-yl 6-deoxy-alpha-L-mannopyranosyl-(1->2)-alpha-L-arabinopyranosyl-(1->2)-beta-D-glucopyranosiduronic acid (1)
Sodium taurochenodeoxycholate (1)
(R)-4-((3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-3,7,12-trihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)
(R)-4-((3R,4R,5S,8S,9S,10R,13R,14S,17R)-3,4-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)
3beta-Hydroxy-5-cholenoic acid (1)
Lyso PC (22:6) (1)
Methyl (3R,4R,5R)-5-[(2R,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(E)-3-phenylprop-2-enoyl]oxyoxan-2-yl]oxy-3,4-dihydroxycyclohexene-1-carboxylate (1)
Propanoic acid, 3,3'-thiobis-, didodecyl ester (1)
2-((R)-4-((3R,5S,7S,8R,9S,10S,13R,14S,17R)-3,7-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanamido)ethane-1-sulfonic acid (1)
LU052302 Acetyl tributyl citrate|tributyl 2-acetyloxypropane-1,2,3-tricarboxylate (1)
1-Hexadecanoyl-sn-glycerol (1)
9-Octadecenamide, (Z)- (1)
Ethanol, 2-(2-butoxyethoxy)- (1)
Alpha-TOCHOPHERYL ACETATE (1)
NCGC00186665-03!2,3-dihydroxypropyl hexadecanoate (1)
[(1S,6S,7R,10R,15S,16R,18S,19R,20R)-6-(3-Furyl)-8,9,18,19,20-pentahydroxy-3-(1-hydroxy-2-methylpropylidene)-7,12,15,17-tetramethyl-4-oxo-5,11,13,21-tetraoxaheptacyclo[10.8.1.114,17.01,10.02,7.010,15.014,19]docos-16-yl]acetic acid (1)

Study type

Transcription profiling by array (6)
Comparative genomic hybridization by array (2)
Methylation profiling by array (1)
RNA-seq of total RNA (1)

Release Date

2021 (26)
2022 (19)
2024 (12)
2025 (10)
2023 (10)
2014 (9)
2015 (8)
2020 (7)
2018 (7)
2017 (6)
2013 (5)
2012 (5)
2019 (5)
2016 (5)
2010 (4)
2009 (3)
2007 (3)
2011 (2)
2004 (2)
2026 (1)
2008 (1)

Lab affiliation

Department of Anthropology, University of Oklahoma, USA (1)

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Abnormal Developmental Control of Replication Timing Domains in Pediatric Acute Lymphoblastic Leukemia

Abnormal replication timing has been observed in cancer but no study has comprehensively evaluated this misregulation. We generated genome-wide replication timing profiles for pediatric leukemias from 17 patients and 3 cell lines, as well as normal B and T cells. Non-leukemic EBV-transformed lymphob...

ORGANISM(S): Homo sapiens

2012-05-16 | E-GEOD-37987 | biostudies-arrayexpress

Transcription profiling of human lymphoblastoid cell response to ultaviolet and ionising radiation

Peripheral blood lymphocytes from a total of 15 healthy individuals without history of cancer (NoCa) were immortalized with Epstein-Barr virus.

Cells were exposed to mock treatment (Mock), ultra-violet radiation (UV), or ionizing radiation (IR). For UV radiation treatment, cells were exposed...

ORGANISM(S): Homo sapiens

2007-09-05 | E-GEOD-1977 | biostudies-arrayexpress

Five-Year Follow-Up of Standard-of-Care Axicabtagene Ciloleucel for Large B-Cell Lymphoma: Results From the US Lymphoma CAR T Consortium.

Not available

S-EPMC11483191 | biostudies-literature

Host-gut microbiota interactions shape parasite infections in farmed Atlantic salmon

Animals and their associated microbiota share long evolutionary histories. However, it is not always clear how host genotype and microbiota interact to affect phenotype. We applied a hologenomic approach to explore how host-microbiota interactions shape lifetime growth and parasite infection in f...

2024-01-24 | MTBLS8575 | MetaboLights

TruSeq-Based Gene Expression Analysis of Formalin-Fixed Paraffin-Embedded (FFPE) Cutaneous T-Cell Lymphoma Samples: Subgroup Analysis Results and Elucidation of Biases from FFPE Sample Processing on the TruSeq Platform.

Not available

S-EPMC5614967 | biostudies-literature

G9a selectively represses a class of late-replicating genes at the nuclear periphery (WG_CGH)

We have investigated the role of the histone methyltransferase G9a in the establishment of silent nuclear compartments. Following conditional knockout of the G9a methyltransferase in mouse ESCs, 167 genes were significantly up-regulated, and no genes were strongly down-regulated. A partially overlap...

ORGANISM(S): Mus musculus

2009-11-02 | E-GEOD-18079 | biostudies-arrayexpress

Most of the extant mtDNA boundaries in south and southwest Asia were likely shaped during the initial settlement of Eurasia by anatomically modern humans.

Not available

S-EPMC516768 | biostudies-literature

G9a selectively represses a class of late-replicating genes at the nuclear periphery (Expression)

ORGANISM(S): Mus musculus

2010-06-20 | E-GEOD-18076 | biostudies-arrayexpress

Holo omic investigation of host and microbe in broiler chicken (HoloFood Trial 1/2/3)

Chicken farming is critical for future food security, yet there is still a need for improving animal welfare and optimised feeding strategies. HoloFood will explore the interaction and impact of the microbiome together with the host (animal) in response to different feeding strategies already imp...

2023-06-13 | MTBLS6988 | MetaboLights

Transcription profiling of human lymphoblastoid cells from patients with limited or acute radiation toxicity, skin cancer patients and normal controls, exposed to UV or IR light

Peripheral blood lymphocytes from a total of 57 patients were immortalized with Epstein-Barr virus. Fourteen radiation-therapy patients suffered unusual levels of radiation toxicity (RadS). Thirteen radiation-therapy patients with limited toxicity (RadC) were enrolled as controls. Fifteen patient...

ORGANISM(S): Homo sapiens

2007-08-05 | E-GEOD-1725 | biostudies-arrayexpress

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166 Results

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