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ProteomicsIdentification and spectral annotation of the threespine stickleback gill proteome
Gill proteome samples from four populations of threespined sticklebacks; Six biological replicates each for 4 different populations: Bodega Harbor, CA (fully plated, marine), Lake Solano (low-plated, freshwater), Laguna de la Bocana del Rosario, Mexico (low plated, brackish water, warm-adapted), Wes...
ORGANISM(S): Gasterosteus Aculeatus (ncbitaxon:69293) 
2017-12-09 | MSV000081795 | MassIVE
TranscriptomicsGill Transcriptomic Responses to Toxin-producing Alga Prymnesium parvum in Rainbow Trout
Prymnesium parvum is regarded as one of the most notorious harmful algal bloom (HAB) species worldwide. In recent years, it has frequently formed toxic blooms in coastal and brackish waters of America, Europe, Australia, Africa and Asia, causing large-scale mortalities of wild and cultured fish and ...
ORGANISM(S): Oncorhynchus mykiss 
2021-11-10 | E-MTAB-10541 | biostudies-arrayexpress
TranscriptomicsIntegration of Transcriptome, Gross Morphology and Histopathology in the Gill of Sea Farmed Atlantic Salmon (Salmo salar): Lessons from Multi-site Sampling
The experiment focused on the transcriptomic changes associated with gill inflammation in sea farmed Atlantic salmon (Salmo salar). To ensure the multifactorial aspect of gill inflammation, fish were sampled at three marine production sites (A on Isle of Mull, B in Shetland and C in Shetland) betwee...
ORGANISM(S): Salmo salar 
2020-06-01 | E-MTAB-8855 | biostudies-arrayexpress
TranscriptomicsPacific salmon gill samples
This SuperSeries is composed of the following subset Series: GSE22171: Pacific salmon gill samples: fate tracking in river, sampled in ocean GSE22177: Pacific salmon gill samples: fate tracking in river GSE22347: Pacific salmon gill samples: fate tracking at spawning grounds Refer to individual Seri...
ORGANISM(S): Oncorhynchus nerka 
2010-12-31 | E-GEOD-22179 | biostudies-arrayexpress
ProteomicsInsights into the natural defences of a coral reef fish against gill ectoparasites: integrated metabolome and microbiome approach.
Understanding natural defence mechanisms against parasites can be a valuable tool for the development of innovative therapies. In this study, we investigated the interplay between the gill mucus metabolome and microbiome of Chaetodon lunulatus, a butterflyfish known to avoid gill monogeneans whilst ...
ORGANISM(S): Chaetodon lunulatus 
2020-11-25 | PXD018867 | Pride
Chaetodon Multi-omics Fish mucus Metabolomics Microbiome Host-parasite interactions Butterflyfish 
TranscriptomicsBP oil spill - lab - gill
In this study we characterize the gill transcriptome changes in Gulf killifish (Fundulus grandis) that coincide with controlled laboratory-based exposure to various concentrations of experimentally-weathered south Louisiana crude oil. Gill transcription was contrasted between doses and across timep...
ORGANISM(S): Fundulus grandis 
2014-08-11 | E-MTAB-2834 | biostudies-arrayexpress
TranscriptomicsPacific salmon gill samples: fate tracking in river
The long-term viability of Pacific salmon stocks and the fisheries they support are threatened if large numbers die prematurely en-route to spawning grounds. Physiological profiles that were correlated with the fate of wild sockeye salmon during river migration were discovered using functional genom...
ORGANISM(S): Oncorhynchus nerka 
2010-12-31 | E-GEOD-22177 | biostudies-arrayexpress
TranscriptomicsGill transcriptomics of Atlantic salmon smolts
We used gill RNA-seq and histopathology to compare commercially farmed autumn and spring smolts at two sampling times approximately 8 months apart, testing whether transcriptomic and histopathological profiles were more strongly associated with smolt production strategy or time in seawater.
ORGANISM(S): Salmo salar 
2026-08-10 | E-MTAB-17447 | biostudies-arrayexpress
TranscriptomicsPacific salmon gill samples: fate tracking in river, sampled in ocean
The long-term viability of Pacific salmon stocks and the fisheries they support are threatened if large numbers die prematurely en-route to spawning grounds. Physiological profiles that were correlated with the fate of wild sockeye salmon during river migration were discovered using functional genom...
ORGANISM(S): Oncorhynchus nerka 
2010-12-31 | E-GEOD-22171 | biostudies-arrayexpress
TranscriptomicsPacific salmon gill samples: fate tracking at spawning grounds
The long-term viability of Pacific salmon stocks and the fisheries they support are threatened if large numbers die prematurely en-route to spawning grounds. Physiological profiles that were correlated with the fate of wild sockeye salmon during river migration were discovered using functional genom...
ORGANISM(S): Oncorhynchus nerka 
2010-12-31 | E-GEOD-22347 | biostudies-arrayexpress
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