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TranscriptomicsGlobal gene expresssion profiling the gills of amoebic gill disease (AGD) affected Atlantic salmon (Salmo salar)
Amoebic gill disease (AGD) is an ectoparasitic condition of some farm-reared marine fish and is caused by Neoparamoeba perurans. Tanks housing Atlantic salmon (Salmo salar) were inoculated with Neoparamoeba perurans and fish were sampled at 36 days postinoculation (pi.). AGD-affected gill tissue was...
ORGANISM(S): Salmo salar 
2010-05-25 | E-GEOD-9595 | biostudies-arrayexpress
ProteomicsIdentification and spectral annotation of the threespine stickleback gill proteome
Gill proteome samples from four populations of threespined sticklebacks; Six biological replicates each for 4 different populations: Bodega Harbor, CA (fully plated, marine), Lake Solano (low-plated, freshwater), Laguna de la Bocana del Rosario, Mexico (low plated, brackish water, warm-adapted), Wes...
ORGANISM(S): Gasterosteus Aculeatus (ncbitaxon:69293) 
2017-12-09 | MSV000081795 | MassIVE
TranscriptomicsIntegration of Transcriptome, Gross Morphology and Histopathology in the Gill of Sea Farmed Atlantic Salmon (Salmo salar): Lessons from Multi-site Sampling
The experiment focused on the transcriptomic changes associated with gill inflammation in sea farmed Atlantic salmon (Salmo salar). To ensure the multifactorial aspect of gill inflammation, fish were sampled at three marine production sites (A on Isle of Mull, B in Shetland and C in Shetland) betwee...
ORGANISM(S): Salmo salar 
2020-06-01 | E-MTAB-8855 | biostudies-arrayexpress
TranscriptomicsGill Transcriptomic Responses to Toxin-producing Alga Prymnesium parvum in Rainbow Trout
Prymnesium parvum is regarded as one of the most notorious harmful algal bloom (HAB) species worldwide. In recent years, it has frequently formed toxic blooms in coastal and brackish waters of America, Europe, Australia, Africa and Asia, causing large-scale mortalities of wild and cultured fish and ...
ORGANISM(S): Oncorhynchus mykiss 
2021-11-10 | E-MTAB-10541 | biostudies-arrayexpress
TranscriptomicsPacific salmon gill samples
This SuperSeries is composed of the following subset Series: GSE22171: Pacific salmon gill samples: fate tracking in river, sampled in ocean GSE22177: Pacific salmon gill samples: fate tracking in river GSE22347: Pacific salmon gill samples: fate tracking at spawning grounds Refer to individual Seri...
ORGANISM(S): Oncorhynchus nerka 
2010-12-31 | E-GEOD-22179 | biostudies-arrayexpress
ProteomicsEffect of water emersion on the gill proteome of Mangrove killifish
Gill proteome of Mangrove killifish was compared by LC-MS/MS using 6 biological replicates of fish exposed to emersion stress versus 6 biological replicates kept under water that served as controls. PI: Experiments and fish exposures were performed in the laboratory of Prof. Patricia Wright at the U...
ORGANISM(S): Kryptolebias Marmoratus (ncbitaxon:37003) 
2017-03-15 | MSV000080634 | MassIVE
GenomicsGills of S. aurata
Gills of S. aurata microbioma
PRJNA985893 | ENA
TranscriptomicsTranscription profiling of gill, liver and kidney from amoebic gill disease infected and disease-free Atlantic salmon
The transcriptome response of 12 amoebic gill disease (AGD) affected Atlantic salmon were compared to 6 AGD naive Atlantic salmon at 19 days post infection. The transcriptome response was examined in the gill, liver and anterior kidney.
ORGANISM(S): Salmo salar 
2008-09-01 | E-MEXP-1286 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of gill from ameobic gill disease resistant and susceptible Atlantic salmon
We compared gill transcriptomes of two groups of Atlantic salmon, one designated putatively resistant, and one designated susceptible to amoebic gill disease (AGD).
ORGANISM(S): Salmo salar 
2008-12-01 | E-MEXP-1396 | biostudies-arrayexpress
ProteomicsHost-symbiont proteomes of Bathymodiolus thermophilus
Bathymodiolus mussels inhabiting deep-sea hydrothermal vents harbor bacterial symbionts in their gills, which support the animals’ diet. While the basic mechanisms of energy generation and CO2 fixation that drive these symbioses are largely established, details of molecular interactions between the ...
ORGANISM(S): Bathymodiolus azoricus (Mussel) Bathymodiolus thermophilus 
2019-11-08 | PXD011639 | Pride
Bathymodiolus Symbiosis Hydrothermal vent Symbiont Host Proteome 
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