Gnat - OmicsDI

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Unknown (189)
Transcriptomics (96)
Genomics (55)
Proteomics (18)
Metabolomics (2)
Other (1)

Organisms

Mus musculus (31)
Homo sapiens (22)
Saccharomyces cerevisiae (21)
Schizosaccharomyces pombe (13)
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Escherichia coli str. K-12 substr. MG1655 (2)
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Arabidopsis (1)
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Organisms

Neurospora crassa (3)
Pseudomonas aeruginosa (3)
Bradysia coprophila (2)
Escherichia coli str. K-12 substr. MG1655 (2)
Schizosaccharomyces pombe (2)
Bradysia impatiens (1)
Arabidopsis (1)
Oryza sativa (1)
Toxoplasma gondii (1)
Arabidopsis thaliana (1)
Mus musculus (1)
Homo sapiens (1)

Repository

biostudies-arrayexpress (111)
ENA (26)
geo (14)
MassIVE (8)
jPOST (4)
pride (4)
iProX (2)
MetaboLights (2)
ExpressionAtlas (1)

Tissue

Cell culture (2)
Rosette (1)
Whole body (1)

Technology Type

Mass Spectrometry (4)
Shotgun proteomics (4)
Mass spectrometry assay (2)

Instrument Platform

NextSeq 500 (8)
Illumina MiSeq (3)
Illumina HiSeq 2000 (3)
LTQ (3)
Agilent G2505B scanner (2)
Axon GenePix 4000B scanning hardware (2)
Orbitrap Fusion Lumos (2)
Axon GenePix 4000A scanning hardware (1)
Ion Torrent S5 (1)
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Vortex (1)
Illumina HiSeq 2500 (1)
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Orbitrap Fusion (1)
Q Exactive (1)
Q Exactive HF (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2012 (15)
2011 (15)
2014 (14)
2015 (13)
2010 (12)
2013 (11)
2009 (9)
2020 (8)
2016 (7)
2021 (6)
2026 (5)
2025 (4)
2023 (4)
2022 (4)
2019 (3)
2007 (3)
2024 (3)
2008 (2)
2005 (2)
2004 (2)
2018 (1)
2017 (1)

CHEBI ID

CHEBI:233140 (1)
CHEBI:175918 (1)
CHEBI:233141 (1)
CHEBI:170014 (1)
CHEBI:233142 (1)
CHEBI:52524 (1)
CHEBI:174241 (1)
CHEBI:197331 (1)
CHEBI:186442 (1)
CHEBI:189698 (1)
CHEBI:67547 (1)
CHEBI:194376 (1)
CHEBI:175995 (1)
CHEBI:168436 (1)
CHEBI:177623 (1)
CHEBI:166520 (1)
CHEBI:174192 (1)
CHEBI:172332 (1)
CHEBI:167530 (1)
CHEBI:78321 (1)
CHEBI:172489 (1)
CHEBI:139328 (1)
CHEBI:34962 (1)
CHEBI:82589 (1)
CHEBI:72822 (1)
CHEBI:27566 (1)
CHEBI:41131 (1)
CHEBI:74561 (1)
CHEBI:16563 (1)
CHEBI:157839 (1)

Metabolite Name

Apigenin-7-O-(6''-malonyl)glucoside (1)
N-benzoyl-2-aminoethyl-ÉÇ-D-glucopyranoside (1)
Luteolin-7-O-glucuronide-5-O-rhamnoside (1)
Daturanolide C (1)
Methyl-4,5-diacetyloxy-3-hydroxy-6-[4-(hydroxymethyl)phenoxy]oxane-2-carboxylate (1)
4,6-(S)-Hexahydroxydiphenoyl-ÉÇ-D-glucose (1)
3-hydroxy-5-methoxybenzaldehyde (1)
6ÉÇ-Hydroxy-8Ï«-methoxyeremophila-1(10),7(11)-dien-12,8ÉÇ-olide (1)
Deoxymutaaspergillic acid (1)
Spiroapplanatumine M (1)
Apigenin-7-O-neohesperidoside (Rhoifolin) (1)
Ganoleuconin B (1)
Spirolingzhine D (1)
3-Hydroxyolean-12-en-24-oic acid (Ï«-Boswellic acid) (1)
Lochrovicine (1)
3-Hydroxyolean-12-en-28-oic acid (Oleanolic acid) (1)
2-Hydroxy-7-methoxy-1,4-benzoxazin-3(2H)-one (HMBOA) (1)
3,4-Open loop-lupine-4(23),20(29)-diene-24-hydroxy-3-carboxylic acid (1)
1-(3,5-Dihydroxyphenyl)pentadecan-1-one (1)
Ajugalaevigatic acid (1)
Syringic acid-4-O-(6''-feruloyl)glucoside (1)
Scutellarein (5,6,7,4'-Tetrahydroxyflavone) (1)
2,3,6,23-Tetrahydroxyurs-12-en-28-oic acid (Madecassic acid) (1)
GANODERMATRIOL(P) (1)
Alnusdiol (1)
Dictamnoside A (1)
7-O-(4''-O-glucosyl)coumaroyl-loganic acid (1)
2-Amino-5-[(1-Carboxy-2-Phenylethyl)Amino]-5-Oxopentanoic acid (1)
3,4-Cycloopen-cycloaltin-4(29),25-diene-24(S)-hydroxy-3-carboxylic acid (1)
Rhamnazin 3-Glucosyl-Arabinofuranoside (1)

First Public Date

2021 (6)
2019 (4)
2014 (4)
2026 (3)
2018 (3)
2023 (2)
2025 (1)
2020 (1)
2015 (1)
2013 (1)

Classification

bacteria (5)
protozoa (1)

Study type

Transcription profiling by array (48)
ChIP-seq (19)
RNA-seq of coding RNA (19)
Methylation profiling by high throughput sequencing (6)
Unknown experiment type (3)
ChIP-chip by array (3)
ChIP-chip by tiling array (2)
Other (2)
RNA-seq of total RNA (2)
MNase-seq (1)
Human - High-throughput sequencing (1)
Animal - High-throughput sequencing (1)
Cell line - High-throughput sequencing (1)
Genotyping by array (1)
Comparative genomic hybridization by array (1)
RNA-seq of non coding RNA (1)

Release Date

2015 (27)
2014 (22)
2020 (21)
2021 (21)
2022 (20)
2025 (19)
2011 (19)
2012 (18)
2019 (17)
2013 (16)
2016 (15)
2010 (13)
2023 (11)
2024 (11)
2018 (9)
2009 (8)
2017 (8)
2008 (6)
2007 (4)
2004 (4)
2005 (3)
2003 (3)
2026 (2)
2006 (2)
2002 (1)

Lab affiliation

Henan University of Technology (1)
Key Laboratory of Zoonotic of Liaoning Province, College of Animal Science and Veterinary Medicine, Shenyang Agricultural University, Liaoning Province, Shenyang 110866, P. R. China (1)
Protein Maturation, Cell fate and Therapeutics Institute for Integrative, Biology of the Cell (I2BC) CNRS UMR9198, Bâtiment 21, 1 avenue de la Terrasse F-91198 Gif-sur-Yvette cedex, France (1)
Protein Maturation, Cell fate and Therapeutics, Institute for Integrative Biology of the Cell (I2BC), CNRS UMR9198, Batiment 21, 1 Avenue de la Terrasse, F-91198 Gif-sur-Yvette CEDEX, France (1)

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Mechanism of translation inhibition by type II GNAT toxins: AtaT, TacT, and ItaT

PRJNA624163 | ENA

Mechanism of translation inhibition by type II GNAT toxins: AtaT, TacT, and ItaT

Type II toxin-antitoxin (TA) systems are two-gene modules widely distributed among prokaryotes. GNAT toxins associated with the DUF1778 antitoxins represent a large family of type II TAs. GNAT toxins inhibit cell growth by disrupting translation via acetylation of aminoacyl-tRNAs. Using ribosome pro...

ORGANISM(S): Escherichia coli str. K-12 substr. MG1655

2020-06-17 | GSE148424 | GEO

GNAT toxins evolve toward narrow tRNA target specificities.

Not available

S-EPMC9177977 | biostudies-literature

Global gene expression profiles of 10 gastric cancer (GC) samples and 10 gastric normal adjacent tissue (gNAT) samples

PRJEB33436 | ENA

Repurposing the GNAT Fold in the Initiation of Polyketide Biosynthesis.

Not available

S-EPMC6949403 | biostudies-literature

Classification and phylogeny for the annotation of novel eukaryotic GNAT acetyltransferases.

Not available