Gong P P - OmicsDI

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Unknown (6828)
Transcriptomics (179)
Proteomics (132)
Metabolomics (42)
Genomics (10)
Multiomics (6)

Organisms

Homo sapiens (114)
Mus musculus (36)
Danio rerio (18)
Rattus norvegicus (10)
Colinus virginianus (9)
Eisenia fetida (9)
Gallus gallus (5)
Arabidopsis thaliana (4)
Macaca fascicularis fascicularis (2)
Iridovirus (1)
Vitis x champinii x Vitis riparia (1)
Epinephelus coioides (1)
Eisenia andrei (1)
Sitodiplosis mosellana (1)
Streptococcus mutans (1)
Gossypium hirsutum (1)
Eimeria tenella (1)
Oryza sativa (1)
Aedes aegypti (1)
Escherichia coli str. K-12 substr. MG1655 (1)
Sus scrofa (1)
Drosophila melanogaster (1)
Escherichia coli RS218 (1)
Helicoverpa armigera nucleopolyhedrovirus G4 (1)
Human CSF-associated densovirus (1)
Mus sp. (1)
Pachycrepoideus vindemmiae (1)
Parabacteroides distasonis ATCC 8503 (1)
Rattus rattus (1)
Saccharomyces cerevisiae (1)

Organisms

Homo sapiens (1)

Repository

biostudies-arrayexpress (181)
pride (87)
MetaboLights (42)
iProX (37)
EGA (5)
MassIVE (5)
PeptideAtlas (3)
ENA (2)
geo (1)

Tissue

Cell culture (25)
Epithelial cell (6)
Leaf (5)
Liver (4)
Others (3)
Blood plasma (3)
Fibroblast (3)
Skin (3)
Whole body (3)
Blood (2)
Blood serum (2)
Brain (2)
Chondrocyte (2)
Lung (2)
Permanent cell line cell (2)
Plant cell (2)
Plasma cell (2)
Root (2)
Small intestine (2)
Abscission zone (1)
B cell (1)
Culture condition:beech wood-grown cell (1)
Early embryonic cell (1)
Egg yolk (1)
Embryonic germ cell (1)
Extracellular exosome assembly (1)
Fat body (1)
Germ cell (1)
LCL-721 cell (1)
LNCaP cell (1)

Disease

Normal (4)
ACUTE MYELOID LEUKEMIA (2)
Chronic lymphocytic leukemia (2)
Lung cancer (2)
Breast cancer (2)
Disease free (2)
Mantle cell lymphoma (1)
Breast Normal (1)
Intestinal type gastric cancer (1)
CHRONIC LYMPHOCYTIC LEUKEMIA (1)
NORMAL (1)
Nonfunctioning endocrine tumors (1)
B-cell chronic lymphocytic leukemia (1)
Colorectal cancer (1)
Colon cancer (1)
Colon adenocarcinoma (1)
Acute Myeloid Leukemia (1)
Gastric cancer (1)
Adenocarcinoma (1)
Central nervous system cancer (1)
Cervical cancer (1)
Acute myeloid leukemia (1)
Acute leukemia (1)
COVID-19 (1)
Castration-resistant prostate carcinoma (1)
Lung non-squamous non-small cell carcinoma (1)
Osteoarthritis (1)
Tauopathy (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (87)
Shotgun proteomics (50)
Mass spectrometry (35)
Bottom-up proteomics (14)
Data-dependent acquisition (11)
Mass spectrometry assay (7)
SWATH MS (7)
Top-down proteomics (6)
Data-independent acquisition (4)
Gel-based experiment (4)
Affinity purification coupled with mass spectrometry proteomics (3)
AB SOLiD System 3.0 (1)
AB SOLiD 4 System (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Proteogenomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (12)
Liquid Chromatography MS - negative - reverse phase (10)
Scanning hardware (9)
Liquid Chromatography MS - negative - hilic (7)
Liquid Chromatography MS - positive - hilic (6)
ScanArray 4000XL [PerkinElmer] (5)
Liquid Chromatography MS - alternating - reverse phase (4)
MS:1000031 (3)
LTQ Orbitrap Elite (3)
Gas Chromatography MS - (3)
API 4000 QTRAP (AB Sciex) (3)
Liquid Chromatography MS - alternating - hilic (3)
Liquid Chromatography MS - positive - reverse-phase (3)
Liquid Chromatography MS - negative - reverse-phase (3)
Illumina NovaSeq 6000 (2)
Q Exactive (2)
TSQ Quantum XLS (Thermo Scientific) (2)
Agilent 5975E GC/MSD (Agilent) (2)
6540 Q-TOF LC/MS (Agilent) (2)
Axon GenePix 4000B scanner (1)
Axon- GenePix4000B (1)
BGISEQ-500 (1)
Quattro micro API (Waters) (1)
Liquid Chromatography MS - alternating – hilic (1)
Liquid Chromatography MS - alternating (1)
Matrix-assisted laser desorption-ionisation imaging MS - (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Xevo QTof MS (Waters) (1)
Liquid Chromatography MS - alternating - reverse-phase (1)
Liquid Chromatography MS - negative - HILIC (1)

Publication Date

2025 (38)
2010 (38)
2022 (27)
2014 (22)
2013 (22)
2023 (22)
2024 (20)
2011 (19)
2016 (18)
2015 (16)
2026 (16)
2021 (16)
2008 (14)
2012 (12)
2007 (12)
2005 (9)
2018 (7)
2020 (7)
2019 (7)
2009 (6)
2017 (6)
2006 (1)
2004 (1)

UNIPROT ID/AC

A0A024R563 (3)
A0A024R8H9 (3)
A0A024RAN2 (3)
A0A024RC46 (3)
A0A087WUD1 (3)
A0A087WVZ5 (3)
A0A087WWK8 (3)
A0A087WXI0 (3)
A0A087WZE9 (3)
A0A087X1S3 (3)
A0A0A0MR66 (3)
A0A0A0MS51 (3)
A0A0A0MSA7 (3)
A0A0B4J220 (3)
A0A0C4DG89 (3)
A0A0C4DGT3 (3)
A0AV96 (3)
A0AVT1 (3)
A0FGR8 (3)
A0FGR8-2 (3)
A0FGR8-6 (3)
A0JLT2 (3)
A0JNW5 (3)
A0MZ66 (3)
A0PJW6 (3)
A0PK00 (3)
A1A4S6 (3)
A1L0T0 (3)
A1L170 (3)
A1L390 (3)

ENSEMBL ID

ENSG00000147251 (3)
ENSG00000170477 (3)
ENSG00000247315 (3)

CHEBI ID

CHEBI:16335 (16)
CHEBI:17368 (16)
CHEBI:16704 (15)
CHEBI:15891 (15)
CHEBI:17568 (14)
CHEBI:16750 (14)
CHEBI:17562 (14)
CHEBI:17154 (14)
CHEBI:16708 (13)
CHEBI:17748 (13)
CHEBI:17750 (13)
CHEBI:17596 (13)
CHEBI:16709 (12)
CHEBI:16610 (12)
CHEBI:16393 (12)
CHEBI:17509 (12)
CHEBI:16919 (12)
CHEBI:17895 (12)
CHEBI:15756 (12)
CHEBI:17256 (11)
CHEBI:17992 (11)
CHEBI:55328 (11)
CHEBI:16411 (11)
CHEBI:32805 (11)
CHEBI:28875 (11)
CHEBI:16856 (11)
CHEBI:27248 (11)
CHEBI:16235 (11)
CHEBI:16737 (11)
CHEBI:15354 (11)

Metabolite Name

Adenosine (13)
Hypoxanthine (13)
Pyridoxine (11)
Guanine (10)
Cytidine (10)
L-Histidine (9)
Guanosine (9)
L-Tyrosine (9)
L-Phenylalanine (9)
Inosine (9)
Betaine (8)
Sphingosine (8)
Taurine (8)
L-Tryptophan (8)
Uridine (8)
Creatinine (8)
Creatine (8)
L-Leucine (8)
L-Alanine (7)
Uracil (7)
Thymine (7)
Nicotinamide (7)
Choline (7)
L-Arginine (7)
L-Lysine (7)
Urocanic acid (7)
Spermidine (7)
Cytosine (7)
Palmitic acid (7)
Adenine (7)

First Public Date

2024 (1)
2015 (1)

Modification

Not available (1)

Study type

Transcription profiling by array (117)
MicroRNA profiling by array (26)
RNA-seq of coding RNA (19)
Unknown experiment type (6)
RNA-seq of non coding RNA (4)
Methylation profiling by array (3)
ChIP-seq (2)
Transcription profiling by SAGE (1)
Comparative genomic hybridization by array (1)
RNA-seq of coding RNA from single cells (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2025 (999)
2022 (922)
2023 (859)
2024 (789)
2021 (759)
2020 (524)
2019 (390)
2018 (308)
2017 (282)
2016 (227)
2015 (198)
2014 (170)
2013 (134)
2026 (124)
2010 (76)
2012 (71)
2011 (62)
2009 (37)
2008 (36)
2007 (21)
2005 (10)
2006 (5)
2004 (2)
2000 (2)
2002 (1)
1999 (1)

Lab affiliation

Department of Orthopedic Surgery, Sir Run Run Shaw Hospital, Medical College of Zhejiang University, Hangzhou City, China. (3)
Third Military Medical University (3)
Jiangsu Key Laboratory of Crop Genetics and Physiology/Co-Innovation Center for Modern Production Technology of Grain Crops, Key Laboratory of Plant Functional Genomics of the Ministry of Education, Yangzhou University, Yangzhou 225009, China (2)
Shenzhen Hospital of Southern Medical University (2)
University of Minnesota at Twin Cities (2)
1 Joint International Research Laboratory of Agriculture and Agri-Product Safety of Ministry of Education of China, Yangzhou University, Yangzhou, Jiangsu225009, P.R. China 2 Key Laboratory of Animal Breeding Reproduction and Molecular Design for Jiangsu Province, College of Animal Science and Technology, Yangzhou University, Yangzhou, Jiangsu225009, P.R. China (1)
1Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139 (1)
Affiliated Cancer Hospital of Hainan Medical University (1)
Anhui Agricultural University,China (1)
BGI-Shenzhen, Shenzhen, 518083,China (1)
Beijing Academy of Agriculture and Forestry Sciences (1)
Beijing Key Lab of Bioprocess, National Energy R&D Center for Biorefinery, College of Life Science and Technology, Beijing University of Chemical Technology, Beijing 100029, PR China (1)
Bio-X Institutes, Key Laboratory for the Genetics of Development and Neuropsychiatric Disorders (Ministry of Education), Shanghai Key Laboratory of Psychotic Disorders, and Brain Science and Technology Research Center, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai 200240, China. (1)
Cancer Institute, University College London (1)
Cancer Research Institute, School of Basic Medical Science, Central South University (1)
Cancer Research Institute, Xiangya Basic Medical College, Central South University, No. 110 Xiangya Road, Kaifu District, Changsha City, Hunan Province (1)
Central South University of Forestry and Technology (1)
College of Horticulture, Nanjing Agricultural University, China (1)
College of Veterinary Medicine, Northwest A&F University, Yangling, Shaanxi, China (1)
Core facility for Mass Spectrometry, ZMBH, University of Heidelberg, Im Neuenheimer Feld 282, 69120 Heidelberg, Germany (1)
Core facility for mass spectrometry and proteomics, ZMBH, University Heidelberg, Im Neuenheimer Feld 282, 69120 Heidelberg, Germany (1)
Daping Hospital of AMU (1)
Department of Biochemistry and Pharmacology, University of Melbourne, Parkville, Melbourne, Victoria 3010, Australia (1)
Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge MA, 02139, USA; Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge MA, 02139, USA; Center for Precision Cancer Medicine, Massachusetts Institute of Technology, Cambridge MA, 02139, USA (1)
Department of Gynecological Oncology National Clinical Research Centre for Obstetrics and Gynecology Cancer Biology Research Centre (Key Laboratory of the Ministry of Education) Tongji Hospital, Tongji Medical College Huazhong University of Science and Technology (1)
Department of Microbiology, The University of Hong Kong, Hong Kong, SAR, China (1)
Department of Molecular Cell Biology, Weizmann Institute of Science, Rehovot, Israel. (1)
Department of Neurology, The Second Affiliated Hospital (Xinqiao Hospital), Army Medical University (Third Military Medical University), Chongqing 400037, China (1)
Department of Neurosurgery, Chongqing Research Center for Glioma Precision Medicine, Chongqing General Hospital, Chongqing University (1)
Department of Orthopedic Surgery, Sir Run Run Shaw Hospital, Medical College of Zhejiang University, Hangzhou City, China (1)

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Arabidopsis: C24 vs rst1

Transcriptional profiling of whole plant comparing C24 vs rst1 mutant Three biological repeat, each sample harvested from 10 4-week old plants, utilizing the Arabidopsis 70-mer oligonucleotide chips (http://ag.arizona.edu/microarray)

ORGANISM(S): Arabidopsis thaliana

2010-05-16 | E-GEOD-16875 | biostudies-arrayexpress

(6,6'-Dimeth-oxy-biphenyl-2,2'-di-yl)bis(diphenyl-phosphane) P,P'-dioxide dihydrate.

Not available

S-EPMC3297869 | biostudies-literature

Salidroside Inhibits Myogenesis by Modulating p-Smad3-Induced Myf5 Transcription.

Not available

S-EPMC5858519 | biostudies-literature

A new species of <i>Pseudopoda</i> (Araneae, Sparassidae) from China, with first description of the female of <i>P. spiralis</i> Zhang, Jager & Liu, 2023.

Not available

S-EPMC12648165 | biostudies-literature

Expression data from adult Arabidopsis roots under 200uM cadmium (Cd) treatment

To massively identify genes that are up-regulated by Cd and in particular transporter genes which might transport peptides or oligopeptides. Four week old hydroponically-grown Col-0 plants were treated with/without 200uM Cd for 6 hours. Total RNA was extracted from roots and subjected to hybridizat...

ORGANISM(S): Arabidopsis thaliana

2010-06-16 | E-GEOD-22114 | biostudies-arrayexpress

Spleen granulopoiesis in psoriasis immune microenvironment aggravates psoriasis via IL-6/P-STAT3 signaling.

Not available

S-EPMC12403492 | biostudies-literature

The Herbal Constituents in An-Gong-Niu-Huang Wan (AGNH) Protect against Cinnabar- and Realgar-Induced Hepatorenal Toxicity and Accumulations of Mercury and Arsenic in Mice.

Not available

S-EPMC8035015 | biostudies-literature

Design, Synthesis, and Evaluation of Tetrahydropyrrolo[1,2-c]pyrimidines as Capsid Assembly Inhibitors for HBV Treatment.

Not available

S-EPMC5601373 | biostudies-literature

Neonatal intestinal immune regulation by the commensal bacterium, P. UF1.